FFCP PHASE1:Hg19::chr19:42231186..42231187,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:42231186..42231187,+ | |||
|coexpression_cluster_id=C3797 | |coexpression_cluster_id=C3797 | ||
|description=CAGE_peak_at_chr19:42231186..42231187,+ | |description=CAGE_peak_at_chr19:42231186..42231187,+ | ||
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|ontology_enrichment_celltype=CL:0002178!1.29e-21!3;CL:0000167!7.57e-17!1;CL:0000164!7.57e-17!1;CL:0000502!7.57e-17!1;CL:0000172!7.57e-17!1;CL:0000173!7.57e-17!1;CL:0002351!7.57e-17!1;CL:1000415!5.94e-09!2;CL:0002251!3.57e-07!21 | |ontology_enrichment_celltype=CL:0002178!1.29e-21!3;CL:0000167!7.57e-17!1;CL:0000164!7.57e-17!1;CL:0000502!7.57e-17!1;CL:0000172!7.57e-17!1;CL:0000173!7.57e-17!1;CL:0002351!7.57e-17!1;CL:1000415!5.94e-09!2;CL:0002251!3.57e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002178;4.27e-34;3 | |ontology_enrichment_celltype_v019=CL:0002178;4.27e-34;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002178,4.27e-34,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:4430!7.57e-17!1;DOID:3493!5.49e-09!2 | |ontology_enrichment_disease=DOID:4430!7.57e-17!1;DOID:3493!5.49e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:3119;1.86e-08;14 | |ontology_enrichment_disease_v019=DOID:3119;1.86e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3119,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002372!3.07e-16!1;UBERON:0001961!3.07e-16!1;UBERON:0001744!3.07e-16!1;UBERON:0001735!3.07e-16!1;UBERON:0001007!7.47e-09!155;UBERON:0001555!7.47e-09!155;UBERON:0007026!7.47e-09!155;UBERON:0003127!8.09e-09!2;UBERON:0000945!1.04e-08!8;UBERON:0010039!1.04e-08!8;UBERON:0004119!4.88e-08!169;UBERON:0000925!4.88e-08!169;UBERON:0006595!4.88e-08!169;UBERON:0001155!7.01e-08!9;UBERON:0005409!3.40e-07!35;UBERON:0000166!4.41e-07!21;UBERON:0001042!5.26e-07!10;UBERON:0009145!5.26e-07!10;UBERON:0004921!7.02e-07!129;UBERON:0004185!7.02e-07!129 | |ontology_enrichment_uberon=UBERON:0002372!3.07e-16!1;UBERON:0001961!3.07e-16!1;UBERON:0001744!3.07e-16!1;UBERON:0001735!3.07e-16!1;UBERON:0001007!7.47e-09!155;UBERON:0001555!7.47e-09!155;UBERON:0007026!7.47e-09!155;UBERON:0003127!8.09e-09!2;UBERON:0000945!1.04e-08!8;UBERON:0010039!1.04e-08!8;UBERON:0004119!4.88e-08!169;UBERON:0000925!4.88e-08!169;UBERON:0006595!4.88e-08!169;UBERON:0001155!7.01e-08!9;UBERON:0005409!3.40e-07!35;UBERON:0000166!4.41e-07!21;UBERON:0001042!5.26e-07!10;UBERON:0009145!5.26e-07!10;UBERON:0004921!7.02e-07!129;UBERON:0004185!7.02e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;4.21e-21;5!UBERON:0010039;4.21e-21;5!UBERON:0005409;2.02e-18;22!UBERON:0001155;2.45e-12;9!UBERON:0004921;1.71e-11;33!UBERON:0000059;2.37e-10;11!UBERON:0001041;1.86e-08;14!UBERON:0000160;7.60e-07;17 | |ontology_enrichment_uberon_v019=UBERON:0000945;4.21e-21;5!UBERON:0010039;4.21e-21;5!UBERON:0005409;2.02e-18;22!UBERON:0001155;2.45e-12;9!UBERON:0004921;1.71e-11;33!UBERON:0000059;2.37e-10;11!UBERON:0001041;1.86e-08;14!UBERON:0000160;7.60e-07;17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.86e-16,25;UBERON:0000945,9.39e-14,8;UBERON:0010039,9.39e-14,8;UBERON:0001155,2.45e-12,9;UBERON:0000059,2.37e-10,11;UBERON:0000160,7.60e-07,17 | |||
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|short_description=p@chr19:42231186..42231187,+ | |short_description=p@chr19:42231186..42231187,+ | ||
}} | }} |
Latest revision as of 08:36, 26 July 2015
Short description: | p@chr19:42231186..42231187, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:42231186..42231187, + |
Coexpression cluster: | C3797_gastric_colon_somatostatinoma_smallcell_nonsmall_throat_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 4.27e-34 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.86e-16 | 25 |
stomach | 9.39e-14 | 8 |
food storage organ | 9.39e-14 | 8 |
colon | 2.45e-12 | 9 |
large intestine | 2.37e-10 | 11 |
intestine | 7.60e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.86e-08 | 14 |