FFCP PHASE1:Hg19::chr5:16179713..16179724,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=441061 | |EntrezGene=441061 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33609 | |HGNC=33609 | ||
|TSSclassifier=strong | |||
|UniProt=A6NNE9 | |UniProt=A6NNE9 | ||
|association_with_transcript=172bp_to_NM_001102562,uc003jfo.2_5end | |association_with_transcript=172bp_to_NM_001102562,uc003jfo.2_5end | ||
|cluster_id=chr5:16179713..16179724,- | |||
|coexpression_cluster_id=C4389 | |coexpression_cluster_id=C4389 | ||
|description=CAGE_peak_4_at_MARCH11_5end | |description=CAGE_peak_4_at_MARCH11_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002553!7.90e-07!1 | |ontology_enrichment_celltype=CL:0002553!7.90e-07!1 | ||
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|ontology_enrichment_celltype_v019_2=CL:0002553,9.99e-30,1;CL:0000082,5.34e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0004140;3.64e-29;1 | |ontology_enrichment_development_v019=UBERON:0004140;3.64e-29;1 | ||
|ontology_enrichment_disease=DOID:169!1.03e-08!6 | |ontology_enrichment_disease=DOID:169!1.03e-08!6 | ||
|ontology_enrichment_disease_v019=DOID:169;7.48e-43;6!DOID:171;4.28e-26;10!DOID:3095;2.64e-12;22!DOID:2994;2.64e-12;22!DOID:1324;1.27e-08;15!DOID:5409;1.70e-08;4!DOID:0050615;3.83e-08;16!DOID:4362;6.58e-07;5 | |ontology_enrichment_disease_v019=DOID:169;7.48e-43;6!DOID:171;4.28e-26;10!DOID:3095;2.64e-12;22!DOID:2994;2.64e-12;22!DOID:1324;1.27e-08;15!DOID:5409;1.70e-08;4!DOID:0050615;3.83e-08;16!DOID:4362;6.58e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:169,7.48e-43,6;DOID:171,4.28e-26,10;DOID:3095,2.64e-12,22;DOID:2994,2.64e-12,22;DOID:1324,1.27e-08,15;DOID:5409,1.70e-08,4;DOID:0050615,3.83e-08,16;DOID:4362,6.39e-07,5 | |||
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|short_description=p4@MARCH11 | |short_description=p4@MARCH11 | ||
}} | }} |
Latest revision as of 17:51, 16 September 2015
Short description: | p4@MARCH11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MARCH11_5end |
Coexpression cluster: | C4389_small_neuroblastoma_nonsmall_heart_cerebellum_medulloblastoma_temporal |
Association with transcript: | 172bp_to_NM_001102562, uc003jfo.2_5end |
EntrezGene: | MARCH11 |
HGNC: | 33609 |
UniProt: | A6NNE9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 9.99e-30 | 1 |
epithelial cell of lung | 5.34e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 3.24e-51 | 5 |
autonomic nervous system | 3.24e-51 | 5 |
peripheral nervous system | 6.82e-29 | 8 |
respiratory tract epithelium | 5.34e-07 | 19 |
lung epithelium | 5.34e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.48e-43 | 6 |
neuroectodermal tumor | 4.28e-26 | 10 |
germ cell and embryonal cancer | 2.64e-12 | 22 |
germ cell cancer | 2.64e-12 | 22 |
lung cancer | 1.27e-08 | 15 |
lung small cell carcinoma | 1.70e-08 | 4 |
respiratory system cancer | 3.83e-08 | 16 |
cervical cancer | 6.39e-07 | 5 |