FFCP PHASE1:Hg19::chr1:153362896..153362903,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6279 | |EntrezGene=6279 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10498 | |HGNC=10498 | ||
|TSSclassifier=strong | |||
|UniProt=P05109 | |UniProt=P05109 | ||
|association_with_transcript=107bp_to_BT007378,CR407674_5end | |association_with_transcript=107bp_to_BT007378,CR407674_5end | ||
|cluster_id=chr1:153362896..153362903,- | |||
|description=CAGE_peak_5_at_S100A8_5end | |description=CAGE_peak_5_at_S100A8_5end | ||
|id=chr1:153362896..153362903,- | |id=chr1:153362896..153362903,- | ||
|ontology_enrichment_celltype=CL:0002057!8.02e-23!42;CL:0000860!5.02e-21!45;CL:0000766!4.18e-19!76;CL:0002194!2.35e-15!63;CL:0000576!2.35e-15!63;CL:0000040!2.35e-15!63;CL:0000559!2.35e-15!63;CL:0002009!9.26e-15!65;CL:0000839!2.02e-13!70;CL:0000557!3.55e-13!71;CL:0000763!1.20e-12!112;CL:0000049!1.20e-12!112;CL:0000738!3.96e-10!140;CL:0002087!3.27e-08!119;CL:0000094!3.90e-08!8;CL:0000037!4.12e-08!172;CL:0000566!4.12e-08!172;CL:0002032!8.32e-08!165;CL:0000837!8.32e-08!165;CL:0000988!2.29e-07!182;CL:0002031!8.58e-07!124 | |ontology_enrichment_celltype=CL:0002057!8.02e-23!42;CL:0000860!5.02e-21!45;CL:0000766!4.18e-19!76;CL:0002194!2.35e-15!63;CL:0000576!2.35e-15!63;CL:0000040!2.35e-15!63;CL:0000559!2.35e-15!63;CL:0002009!9.26e-15!65;CL:0000839!2.02e-13!70;CL:0000557!3.55e-13!71;CL:0000763!1.20e-12!112;CL:0000049!1.20e-12!112;CL:0000738!3.96e-10!140;CL:0002087!3.27e-08!119;CL:0000094!3.90e-08!8;CL:0000037!4.12e-08!172;CL:0000566!4.12e-08!172;CL:0002032!8.32e-08!165;CL:0000837!8.32e-08!165;CL:0000988!2.29e-07!182;CL:0002031!8.58e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0002623;3.66e-23;3!CL:0000622;1.71e-14;5!CL:0000154;2.59e-12;6!CL:0000150;1.16e-08;9 | |ontology_enrichment_celltype_v019=CL:0002623;3.66e-23;3!CL:0000622;1.71e-14;5!CL:0000154;2.59e-12;6!CL:0000150;1.16e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002623,3.27e-23,3;CL:0000622,1.60e-14,5;CL:0000154,2.45e-12,6;CL:0000150,1.12e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.23e-66;1!UBERON:0008814;5.96e-34;2!UBERON:0010056;5.96e-34;2 | |ontology_enrichment_development_v019=UBERON:0009143;1.23e-66;1!UBERON:0008814;5.96e-34;2!UBERON:0010056;5.96e-34;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.88e-16!102;UBERON:0003061!6.88e-16!102;UBERON:0002193!1.89e-15!112;UBERON:0002371!3.00e-11!80;UBERON:0001474!3.44e-10!86;UBERON:0002405!1.21e-09!115;UBERON:0004765!3.59e-09!101;UBERON:0001434!3.59e-09!101 | |ontology_enrichment_uberon=UBERON:0002390!6.88e-16!102;UBERON:0003061!6.88e-16!102;UBERON:0002193!1.89e-15!112;UBERON:0002371!3.00e-11!80;UBERON:0001474!3.44e-10!86;UBERON:0002405!1.21e-09!115;UBERON:0004765!3.59e-09!101;UBERON:0001434!3.59e-09!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0001043;2.62e-23;3!UBERON:0001723;3.66e-23;3!UBERON:0001033;3.66e-23;3!UBERON:0001041;6.18e-20;14!UBERON:0001044;2.59e-12;6!UBERON:0003293;2.59e-12;6!UBERON:0003294;2.59e-12;6!UBERON:0010047;2.59e-12;6!UBERON:0003408;2.59e-12;6!UBERON:0000167;2.59e-12;6!UBERON:0001555;1.39e-10;54!UBERON:0000165;1.54e-10;28!UBERON:0004921;1.23e-08;33 | |ontology_enrichment_uberon_v019=UBERON:0001043;2.62e-23;3!UBERON:0001723;3.66e-23;3!UBERON:0001033;3.66e-23;3!UBERON:0001041;6.18e-20;14!UBERON:0001044;2.59e-12;6!UBERON:0003293;2.59e-12;6!UBERON:0003294;2.59e-12;6!UBERON:0010047;2.59e-12;6!UBERON:0003408;2.59e-12;6!UBERON:0000167;2.59e-12;6!UBERON:0001555;1.39e-10;54!UBERON:0000165;1.54e-10;28!UBERON:0004921;1.23e-08;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001043,2.62e-23,3;UBERON:0009143,2.62e-23,3;UBERON:0001723,4.09e-23,3;UBERON:0001033,4.09e-23,3;UBERON:0010056,4.09e-23,3;UBERON:0000166,4.26e-13,22;UBERON:0001044,2.45e-12,6;UBERON:0003293,2.45e-12,6;UBERON:0003294,2.45e-12,6;UBERON:0010047,2.45e-12,6;UBERON:0000167,2.45e-12,6;UBERON:0000165,3.24e-10,29;UBERON:0000930,3.24e-10,29;UBERON:0000161,1.92e-08,36;UBERON:0003408,6.13e-08,10;UBERON:0001042,6.56e-08,10;UBERON:0009145,6.56e-08,10;UBERON:0001041,7.10e-08,87;UBERON:0006562,2.63e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0.376484679085209,0,0.224723484445085,0.306083892370903,0,0,0.329851300186716,0.997318288108159,0,0,0.56738522469114,0,0.502497330513487,0,0,0,0.368277635987565,0,0,0,0,0.112328631146495,0.750884464207532,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,2.03676934625681,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,1.08858373948481,0.342233301085281,0.471464371102113,0.430333232356058,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0.376484679085209,0,0.224723484445085,0.306083892370903,0,0,0.329851300186716,0.997318288108159,0,0,0.56738522469114,0,0.502497330513487,0,0,0,0.368277635987565,0,0,0,0,0.112328631146495,0.750884464207532,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,2.03676934625681,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,1.08858373948481,0.342233301085281,0.471464371102113,0.430333232356058,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | ||
|short_description=p5@S100A8 | |short_description=p5@S100A8 | ||
}} | }} |
Latest revision as of 05:16, 17 September 2015
Short description: | p5@S100A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_S100A8_5end |
Coexpression cluster: | NA |
Association with transcript: | 107bp_to_BT007378, CR407674_5end |
EntrezGene: | S100A8 |
HGNC: | 10498 |
UniProt: | P05109 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 3.27e-23 | 3 |
acinar cell | 1.60e-14 | 5 |
protein secreting cell | 2.45e-12 | 6 |
glandular epithelial cell | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
esophagus | 2.62e-23 | 3 |
esophageal region | 2.62e-23 | 3 |
tongue | 4.09e-23 | 3 |
gustatory system | 4.09e-23 | 3 |
future tongue | 4.09e-23 | 3 |
oral opening | 4.26e-13 | 22 |
saliva-secreting gland | 2.45e-12 | 6 |
gland of oral region | 2.45e-12 | 6 |
gland of foregut | 2.45e-12 | 6 |
oral gland | 2.45e-12 | 6 |
oral cavity | 2.45e-12 | 6 |
mouth | 3.24e-10 | 29 |
stomodeum | 3.24e-10 | 29 |
orifice | 1.92e-08 | 36 |
gland of gut | 6.13e-08 | 10 |
chordate pharynx | 6.56e-08 | 10 |
pharyngeal region of foregut | 6.56e-08 | 10 |
foregut | 7.10e-08 | 87 |
pharynx | 2.63e-07 | 11 |