FFCP PHASE1:Hg19::chr15:32969649..32969656,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6447 | |EntrezGene=6447 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10816 | |HGNC=10816 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-104bp_to_ENST00000498069_5end | |association_with_transcript=-104bp_to_ENST00000498069_5end | ||
|cluster_id=chr15:32969649..32969656,+ | |||
|coexpression_cluster_id=C414 | |coexpression_cluster_id=C414 | ||
|description=CAGE_peak_14_at_SCG5_5end | |description=CAGE_peak_14_at_SCG5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000319!9.02e-09!1 | |ontology_enrichment_celltype=CL:0000319!9.02e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0000182;7.48e-07;12 | |ontology_enrichment_celltype_v019=CL:0000182;7.48e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.48e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.32e-07;11 | |ontology_enrichment_development_v019=UBERON:0004161;2.32e-07;11 | ||
|ontology_enrichment_disease=DOID:3030!9.02e-09!1 | |ontology_enrichment_disease=DOID:3030!9.02e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:154;7.05e-34;2!DOID:4236;7.05e-34;2 | |ontology_enrichment_disease_v019=DOID:154;7.05e-34;2!DOID:4236;7.05e-34;2 | ||
|ontology_enrichment_disease_v019_2=DOID:154,7.05e-34,2;DOID:4236,7.05e-34,2 | |||
|ontology_enrichment_uberon=UBERON:0001282!3.06e-09!1;UBERON:0009842!3.06e-09!1;UBERON:0003704!3.06e-09!1;UBERON:0001171!3.06e-09!1;UBERON:0001172!3.06e-09!1 | |ontology_enrichment_uberon=UBERON:0001282!3.06e-09!1;UBERON:0009842!3.06e-09!1;UBERON:0003704!3.06e-09!1;UBERON:0001171!3.06e-09!1;UBERON:0001172!3.06e-09!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.23e-66;1!UBERON:0009842;1.23e-66;1!UBERON:0003704;1.23e-66;1!UBERON:0001171;1.23e-66;1!UBERON:0001172;1.23e-66;1!UBERON:0001280;2.62e-23;3!UBERON:0004647;2.62e-23;3!UBERON:0002394;7.35e-18;4!UBERON:0003928;7.35e-18;4!UBERON:0002294;8.16e-11;7!UBERON:0001173;8.16e-11;7!UBERON:0000058;5.73e-08;10 | |ontology_enrichment_uberon_v019=UBERON:0001282;1.23e-66;1!UBERON:0009842;1.23e-66;1!UBERON:0003704;1.23e-66;1!UBERON:0001171;1.23e-66;1!UBERON:0001172;1.23e-66;1!UBERON:0001280;2.62e-23;3!UBERON:0004647;2.62e-23;3!UBERON:0002394;7.35e-18;4!UBERON:0003928;7.35e-18;4!UBERON:0002294;8.16e-11;7!UBERON:0001173;8.16e-11;7!UBERON:0000058;5.73e-08;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.23e-66,1;UBERON:0009842,1.23e-66,1;UBERON:0003704,1.23e-66,1;UBERON:0001171,1.23e-66,1;UBERON:0001172,1.23e-66,1;UBERON:0001280,2.62e-23,3;UBERON:0004647,2.62e-23,3;UBERON:0005171,2.62e-23,3;UBERON:0002394,2.19e-12,6;UBERON:0003928,2.19e-12,6;UBERON:0002294,1.04e-08,9;UBERON:0001173,1.04e-08,9;UBERON:0004912,1.04e-08,9 | |||
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|short_description=p14@SCG5 | |short_description=p14@SCG5 | ||
}} | }} |
Latest revision as of 04:13, 17 September 2015
Short description: | p14@SCG5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SCG5_5end |
Coexpression cluster: | C414_cholangiocellular_testis_gall_pagetoid_mesothelioma_thyroid_osteoclastoma |
Association with transcript: | -104bp_to_ENST00000498069_5end |
EntrezGene: | SCG5 |
HGNC: | 10816 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.48e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.23e-66 | 1 |
acinus | 1.23e-66 | 1 |
intrahepatic bile duct | 1.23e-66 | 1 |
portal lobule | 1.23e-66 | 1 |
hepatic acinus | 1.23e-66 | 1 |
liver parenchyma | 2.62e-23 | 3 |
liver lobule | 2.62e-23 | 3 |
hepatic duct | 2.62e-23 | 3 |
bile duct | 2.19e-12 | 6 |
digestive system duct | 2.19e-12 | 6 |
biliary system | 1.04e-08 | 9 |
biliary tree | 1.04e-08 | 9 |
biliary bud | 1.04e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 7.05e-34 | 2 |
carcinosarcoma | 7.05e-34 | 2 |