FFCP PHASE1:Hg19::chr1:153004839..153004866,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6699 | |EntrezGene=6699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11260 | |HGNC=11260 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_uc009wnx.1_5end | |association_with_transcript=17bp_to_uc009wnx.1_5end | ||
|cluster_id=chr1:153004839..153004866,+ | |||
|coexpression_cluster_id=C197 | |coexpression_cluster_id=C197 | ||
|description=CAGE_peak_2_at_SPRR1B_5end | |description=CAGE_peak_2_at_SPRR1B_5end | ||
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|ontology_enrichment_celltype=CL:0002076!1.24e-29!43;CL:0002368!3.14e-21!13;CL:0000223!3.17e-20!59;CL:0000622!1.37e-19!5;CL:0000154!2.85e-16!6;CL:0002251!5.82e-16!21;CL:0002159!1.35e-13!13;CL:0002623!2.30e-12!3;CL:0002621!2.48e-12!3;CL:0002328!1.92e-11!3;CL:0000150!9.86e-11!9;CL:0002202!5.59e-10!9;CL:0002632!5.59e-10!9;CL:0000066!1.42e-09!254;CL:0000244!3.60e-09!4;CL:0000731!3.60e-09!4;CL:0000575!4.71e-09!2;CL:0000317!5.95e-09!2;CL:1000448!5.95e-09!2;CL:0002308!5.95e-09!2;CL:0002140!5.95e-09!2;CL:0000362!6.52e-08!8 | |ontology_enrichment_celltype=CL:0002076!1.24e-29!43;CL:0002368!3.14e-21!13;CL:0000223!3.17e-20!59;CL:0000622!1.37e-19!5;CL:0000154!2.85e-16!6;CL:0002251!5.82e-16!21;CL:0002159!1.35e-13!13;CL:0002623!2.30e-12!3;CL:0002621!2.48e-12!3;CL:0002328!1.92e-11!3;CL:0000150!9.86e-11!9;CL:0002202!5.59e-10!9;CL:0002632!5.59e-10!9;CL:0000066!1.42e-09!254;CL:0000244!3.60e-09!4;CL:0000731!3.60e-09!4;CL:0000575!4.71e-09!2;CL:0000317!5.95e-09!2;CL:1000448!5.95e-09!2;CL:0002308!5.95e-09!2;CL:0002140!5.95e-09!2;CL:0000362!6.52e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000622;1.53e-21;5!CL:0002621;5.18e-20;3!CL:0000154;5.48e-18;6!CL:0000575;2.46e-14;2!CL:0000317;3.01e-14;2!CL:1000448;3.01e-14;2!CL:0002308;3.01e-14;2!CL:0002140;3.01e-14;2!CL:0002076;5.72e-13;42!CL:0000150;4.78e-12;9!CL:0002159;1.14e-11;14!CL:0002251;2.90e-11;20!CL:0002623;6.69e-10;3!CL:0000307;2.79e-09;3!CL:0002368;5.42e-08;13!CL:0002252;8.80e-08;1!CL:0000244;2.20e-07;4!CL:0000731;2.20e-07;4!CL:0000362;3.93e-07;9 | |ontology_enrichment_celltype_v019=CL:0000622;1.53e-21;5!CL:0002621;5.18e-20;3!CL:0000154;5.48e-18;6!CL:0000575;2.46e-14;2!CL:0000317;3.01e-14;2!CL:1000448;3.01e-14;2!CL:0002308;3.01e-14;2!CL:0002140;3.01e-14;2!CL:0002076;5.72e-13;42!CL:0000150;4.78e-12;9!CL:0002159;1.14e-11;14!CL:0002251;2.90e-11;20!CL:0002623;6.69e-10;3!CL:0000307;2.79e-09;3!CL:0002368;5.42e-08;13!CL:0002252;8.80e-08;1!CL:0000244;2.20e-07;4!CL:0000731;2.20e-07;4!CL:0000362;3.93e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000622,1.57e-21,5;CL:0002621,5.71e-20,3;CL:0000154,5.60e-18,6;CL:0002076,1.26e-16,42;CL:0000575,2.31e-14,2;CL:0000317,3.43e-14,2;CL:1000448,3.43e-14,2;CL:0002308,3.43e-14,2;CL:0002140,3.43e-14,2;CL:0000150,4.85e-12,9;CL:0002159,1.16e-11,14;CL:0000223,1.71e-11,58;CL:0002251,2.82e-11,20;CL:0002623,6.27e-10,3;CL:0000068,3.38e-09,3;CL:0000069,3.38e-09,3;CL:0000307,3.38e-09,3;CL:0000377,3.38e-09,3;CL:0002368,5.90e-08,13;CL:0002252,7.97e-08,1;CL:0000244,2.13e-07,4;CL:0000731,2.13e-07,4;CL:0000362,4.06e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;2.79e-09;3!CL:0000223;5.51e-09;58!UBERON:0009143;2.89e-08;1!UBERON:0000358;1.18e-07;1 | |ontology_enrichment_development_v019=CL:0000377;2.79e-09;3!CL:0000223;5.51e-09;58!UBERON:0009143;2.89e-08;1!UBERON:0000358;1.18e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;1.18e-07;1!DOID:3149;1.18e-07;1 | |ontology_enrichment_disease_v019=DOID:3151;1.18e-07;1!DOID:3149;1.18e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,1.18e-07,1;DOID:3149,1.18e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!4.21e-28!72;UBERON:0000166!6.30e-20!21;UBERON:0000165!4.96e-17!28;UBERON:0000930!4.96e-17!28;UBERON:0000065!7.55e-16!53;UBERON:0004119!8.57e-16!169;UBERON:0000925!8.57e-16!169;UBERON:0006595!8.57e-16!169;UBERON:0000161!1.27e-15!35;UBERON:0003102!6.38e-14!95;UBERON:0001444!1.99e-12!48;UBERON:0001949!2.48e-12!3;UBERON:0004815!1.92e-11!3;UBERON:0002031!1.92e-11!3;UBERON:0005181!1.93e-10!35;UBERON:0001007!1.06e-09!155;UBERON:0001555!1.06e-09!155;UBERON:0007026!1.06e-09!155;UBERON:0001042!2.80e-09!10;UBERON:0009145!2.80e-09!10;UBERON:0003408!4.92e-09!10;UBERON:0000072!5.37e-09!46;UBERON:0007196!5.92e-09!14;UBERON:0001558!5.92e-09!14;UBERON:0002419!5.95e-09!2;UBERON:0007771!5.95e-09!2;UBERON:0003297!5.95e-09!2;UBERON:0001821!5.95e-09!2;UBERON:0003487!5.95e-09!2;UBERON:0001820!5.95e-09!2;UBERON:0005089!5.95e-09!2;UBERON:0005088!5.95e-09!2;UBERON:0005178!6.67e-09!34;UBERON:0002224!6.67e-09!34;UBERON:0004807!7.28e-09!28;UBERON:0002185!1.08e-08!4;UBERON:0000974!1.56e-08!10;UBERON:0006562!2.10e-08!11;UBERON:0001041!5.10e-08!98;UBERON:0000365!2.06e-07!5;UBERON:0000078!2.38e-07!18;UBERON:0003729!8.63e-07!5 | |ontology_enrichment_uberon=UBERON:0001004!4.21e-28!72;UBERON:0000166!6.30e-20!21;UBERON:0000165!4.96e-17!28;UBERON:0000930!4.96e-17!28;UBERON:0000065!7.55e-16!53;UBERON:0004119!8.57e-16!169;UBERON:0000925!8.57e-16!169;UBERON:0006595!8.57e-16!169;UBERON:0000161!1.27e-15!35;UBERON:0003102!6.38e-14!95;UBERON:0001444!1.99e-12!48;UBERON:0001949!2.48e-12!3;UBERON:0004815!1.92e-11!3;UBERON:0002031!1.92e-11!3;UBERON:0005181!1.93e-10!35;UBERON:0001007!1.06e-09!155;UBERON:0001555!1.06e-09!155;UBERON:0007026!1.06e-09!155;UBERON:0001042!2.80e-09!10;UBERON:0009145!2.80e-09!10;UBERON:0003408!4.92e-09!10;UBERON:0000072!5.37e-09!46;UBERON:0007196!5.92e-09!14;UBERON:0001558!5.92e-09!14;UBERON:0002419!5.95e-09!2;UBERON:0007771!5.95e-09!2;UBERON:0003297!5.95e-09!2;UBERON:0001821!5.95e-09!2;UBERON:0003487!5.95e-09!2;UBERON:0001820!5.95e-09!2;UBERON:0005089!5.95e-09!2;UBERON:0005088!5.95e-09!2;UBERON:0005178!6.67e-09!34;UBERON:0002224!6.67e-09!34;UBERON:0004807!7.28e-09!28;UBERON:0002185!1.08e-08!4;UBERON:0000974!1.56e-08!10;UBERON:0006562!2.10e-08!11;UBERON:0001041!5.10e-08!98;UBERON:0000365!2.06e-07!5;UBERON:0000078!2.38e-07!18;UBERON:0003729!8.63e-07!5 | ||
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|short_description=p2@SPRR1B | |short_description=p2@SPRR1B | ||
}} | }} |
Latest revision as of 04:29, 17 September 2015
Short description: | p2@SPRR1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SPRR1B_5end |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | 17bp_to_uc009wnx.1_5end |
EntrezGene: | SPRR1B |
HGNC: | 11260 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 1.57e-21 | 5 |
gingival epithelial cell | 5.71e-20 | 3 |
protein secreting cell | 5.60e-18 | 6 |
endo-epithelial cell | 1.26e-16 | 42 |
corneal epithelial cell | 2.31e-14 | 2 |
sebum secreting cell | 3.43e-14 | 2 |
epithelial cell of sweat gland | 3.43e-14 | 2 |
epithelial cell of skin gland | 3.43e-14 | 2 |
acinar cell of sebaceous gland | 3.43e-14 | 2 |
glandular epithelial cell | 4.85e-12 | 9 |
general ecto-epithelial cell | 1.16e-11 | 14 |
endodermal cell | 1.71e-11 | 58 |
epithelial cell of alimentary canal | 2.82e-11 | 20 |
acinar cell of salivary gland | 6.27e-10 | 3 |
duct epithelial cell | 3.38e-09 | 3 |
branched duct epithelial cell | 3.38e-09 | 3 |
tracheal epithelial cell | 3.38e-09 | 3 |
tracheoblast | 3.38e-09 | 3 |
respiratory epithelial cell | 5.90e-08 | 13 |
epithelial cell of esophagus | 7.97e-08 | 1 |
transitional epithelial cell | 2.13e-07 | 4 |
urothelial cell | 2.13e-07 | 4 |
epidermal cell | 4.06e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 5.71e-20 | 3 |
oral opening | 3.93e-18 | 22 |
skin gland | 3.43e-14 | 2 |
epidermis gland | 3.43e-14 | 2 |
gland of integumental system | 3.43e-14 | 2 |
sebaceous gland | 3.43e-14 | 2 |
skin sebaceous gland | 3.43e-14 | 2 |
sweat gland | 3.43e-14 | 2 |
sweat gland placode | 3.43e-14 | 2 |
sebaceous gland placode | 3.43e-14 | 2 |
orifice | 1.66e-13 | 36 |
mouth | 1.78e-13 | 29 |
stomodeum | 1.78e-13 | 29 |
respiratory system | 2.54e-12 | 74 |
surface structure | 5.70e-12 | 99 |
subdivision of head | 8.81e-12 | 49 |
anterior region of body | 7.73e-11 | 62 |
craniocervical region | 7.73e-11 | 62 |
tongue | 4.20e-10 | 3 |
gustatory system | 4.20e-10 | 3 |
future tongue | 4.20e-10 | 3 |
head | 4.31e-10 | 56 |
esophagus | 6.84e-10 | 3 |
esophageal region | 6.84e-10 | 3 |
endoderm-derived structure | 1.72e-09 | 160 |
endoderm | 1.72e-09 | 160 |
presumptive endoderm | 1.72e-09 | 160 |
trachea | 1.16e-08 | 7 |
respiratory airway | 1.16e-08 | 7 |
tonsil | 5.70e-08 | 1 |
mucosa-associated lymphoid tissue | 5.70e-08 | 1 |
lymphoid tissue | 5.70e-08 | 1 |
tonsillar ring | 5.70e-08 | 1 |
epithelium of mucosa | 8.23e-08 | 8 |
gingiva | 8.23e-08 | 8 |
cornea | 1.31e-07 | 4 |
eye surface | 1.31e-07 | 4 |
optic eminence | 1.31e-07 | 4 |
corneal primordium | 1.31e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.18e-07 | 1 |
keratoacanthoma | 1.18e-07 | 1 |