FFCP PHASE1:Hg19::chr1:78398986..78399002,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91624 | |EntrezGene=91624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29557 | |HGNC=29557 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=259bp_to_uc001dig.3_5end | |association_with_transcript=259bp_to_uc001dig.3_5end | ||
|cluster_id=chr1:78398986..78399002,+ | |||
|coexpression_cluster_id=C9 | |coexpression_cluster_id=C9 | ||
|description=CAGE_peak_10_at_NEXN_5end | |description=CAGE_peak_10_at_NEXN_5end | ||
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|ontology_enrichment_celltype=CL:0000057!5.80e-10!75;CL:0000055!8.07e-10!180 | |ontology_enrichment_celltype=CL:0000057!5.80e-10!75;CL:0000055!8.07e-10!180 | ||
|ontology_enrichment_celltype_v019=CL:0002615;3.00e-09;3!CL:1000306;9.80e-07;4!CL:0002547;9.80e-07;4 | |ontology_enrichment_celltype_v019=CL:0002615;3.00e-09;3!CL:1000306;9.80e-07;4!CL:0002547;9.80e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002615,3.99e-09,3;CL:0002561,7.80e-07,2;CL:0002195,8.51e-07,2;CL:0002571,8.51e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!2.60e-07!63;UBERON:0001015!2.60e-07!63;UBERON:0000383!2.60e-07!63 | |ontology_enrichment_uberon=UBERON:0002385!2.60e-07!63;UBERON:0001015!2.60e-07!63;UBERON:0000383!2.60e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.92e-12;6!UBERON:0002358;5.92e-12;6!UBERON:0003684;5.92e-12;6!UBERON:0001178;5.92e-12;6!UBERON:0004457;7.74e-08;9!UBERON:0000042;7.74e-08;9!UBERON:0005090;2.00e-07;2!UBERON:0001630;2.00e-07;2!UBERON:0002385;3.23e-07;31!UBERON:0001015;3.23e-07;31!UBERON:0000383;3.23e-07;31!UBERON:0004797;9.80e-07;4!UBERON:0000415;9.80e-07;4!UBERON:0007240;9.80e-07;4!UBERON:0005742;9.80e-07;4!UBERON:0005734;9.80e-07;4!UBERON:0004664;9.80e-07;4!UBERON:0004663;9.80e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0003688;5.92e-12;6!UBERON:0002358;5.92e-12;6!UBERON:0003684;5.92e-12;6!UBERON:0001178;5.92e-12;6!UBERON:0004457;7.74e-08;9!UBERON:0000042;7.74e-08;9!UBERON:0005090;2.00e-07;2!UBERON:0001630;2.00e-07;2!UBERON:0002385;3.23e-07;31!UBERON:0001015;3.23e-07;31!UBERON:0000383;3.23e-07;31!UBERON:0004797;9.80e-07;4!UBERON:0000415;9.80e-07;4!UBERON:0007240;9.80e-07;4!UBERON:0005742;9.80e-07;4!UBERON:0005734;9.80e-07;4!UBERON:0004664;9.80e-07;4!UBERON:0004663;9.80e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.63e-12,6;UBERON:0002358,9.63e-12,6;UBERON:0003684,9.63e-12,6;UBERON:0001178,9.63e-12,6;UBERON:0004797,1.02e-09,7;UBERON:0005090,1.93e-07,2;UBERON:0001630,1.93e-07,2;UBERON:0005933,7.80e-07,2;UBERON:0005942,7.80e-07,2;UBERON:0005932,7.80e-07,2 | |||
|phase1_expression=0.726713517082227,3.63970890614671,2.11431606143957,1.0007329835313,1.78784437770915,0,0,0.631719873426831,0.783556884599516,0,0,0,0,0.123766352960047,0,0.672325146451775,1.80808358407193,0.730310090387373,1.46379839637152,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434377689410233,0,0,0.316462387440884,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.255725123687061,0,0,0.724232594804119,0,0,0,0.665188192387692,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,1.01304409331664,1.19168262731897,0.286836620748814,1.06400514659507,0,0,0,0,0.404132016209064,0.163461903113459,0,0.576175924479999,0,0,0,0.896692083310806,0,0,0.140450806702248,0,0.859840221182376,0.103325781175765,0,1.23633464639278,0,0,0.505008341862199,0.125118519871964,0,0.438977620880838,0.30648779579902,0.300476117813194,0.226864366320042,2.33206526395521,0.640672166455702,0.211931901159562,1.20036438433761,0.309157587715317,0.772921620136887,0.930584281657949,0.337552664482532,0.292311015483596,1.26216887122057,0.0920498986422993,0.646584227275248,0.355009592516614,0.201504196455281,0.169560592310488,0,0.272746120590835,0,0,0,0.116193942869518,0,0,0,0,0,0,1.85747171212792,1.44375896333917,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0.769494313892781,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0.70445216541493,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.2933531432838,0.129271715757778,0,0.845302752556,0.797814349754612,1.04007436911366,0,0,0,1.85871391755592,0,0,0,1.42156779497018,0,0.602878754119172,0,1.29964888536674,0,0,0,0.239624855491583,1.14861935834114,0,0.434343920002738,1.43833425785268,0.358121926479791,0.336255431980582,0,0,0,0,0,0.773288812777695,0,0,0,2.99161459204025,0.414415513436035,0.12269149171914,0,0,1.45579603071565,1.07057393278297,0.630809660135739,0.937131319941706,0,0,0,1.32845119707087,0,0.521301686808497,0,0,0,0.215714200818617,0,0,0,0,0.496215615637554,1.38115775959256,0.841980283299221,0.896974044789907,2.04682899626681,1.28683136914886,0,1.23367755042124,0.177561725313127,0.246381468041427,0.519254429183621,0.116210378459959,0,0.601519410909855,0,0.114814448164607,1.45672934405374,1.44236856455367,0,0.0770153371044148,0,0,0.211103257785751,0,0,1.51141141271498,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0.309123034943167,0.54941678891006,0.330037999682352,0,0,0,0.290012154876366,0.154048617114644,0.460511024178389,0.137836572484531,0.322260734604821,0.435050081742686,0.170453254832202,2.1367688555217,0,0.192190067365106,0,0,0,1.25924938732256,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0.38126038784765,0,0.42793898803392,0,0,0.539617372749944,1.09814811894422,0.471249609382746,0.202182481573316,0,0,0,0.243713489631284,0,0.545999645631943,0.707027159768564,0,0,0.66343897524122,0,0,1.31178950409327,0,0,0,0.860468113224309,0.392996164052485,0,0,0.633322905892992,0.658589785919804,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.213648142254946,0,0,0,0,0.213425530045242,0,0,0,0.211673582723883,0,0,0.684704037099577,0,0,0,0.321176150207399,1.00899853595524,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0.996239941255349,0.276283915531148,0,0,0,1.55519793830904,0,0,0,1.479651084554,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.265372693510018,1.83309043480088,0,0,0,0,2.40773294189637,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0.174118413160805,0.52418000472609,0,0,0,0,1.26085721434945,0,0.225980740780532,0.274083849293502,0.19871461170299,0,0,0.0801588202515337,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0,0,0.305994652908965,0,0,0,0,0.859530882839914,0,1.95497680890578,12.8329837446543,0.717873024576814,0.199679000498991,0.429226048136571,0.89268582976749,1.67958681216816,1.44119953416961,0,0,0,0.0674035438541849,0,0.677386656526276,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0.191915197319445,7.86164859010704,7.94510364438518,0,0,0,0,0,0,0.170388021785422,0.339936274560377,0,0,0,0.13223260174269,0,0,0.213574825135389,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0,0,0.249960815924213,0,0,0.235265819698172,0,0,0.298509605773748,0.233713309847224,0,0.189403005275089,0,1.77962244319307,0.228840068396924,0.302461847526478,0,0.147855149989634,0.318593534327405,0.449803112163605,0,0.829412415681711,0.53168342911599,1.04349012362347,0.901545653983311,0.761610424337591,0,0.181848659202559,0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| ||
|short_description=p10@NEXN | |short_description=p10@NEXN | ||
}} | }} |
Latest revision as of 07:47, 19 September 2015
Short description: | p10@NEXN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_NEXN_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 259bp_to_uc001dig.3_5end |
EntrezGene: | NEXN |
HGNC: | 29557 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 3.99e-09 | 3 |
outer root sheath cell | 7.80e-07 | 2 |
hepatic stem cell | 8.51e-07 | 2 |
hepatic mesenchymal stem cell | 8.51e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.63e-12 | 6 |
peritoneum | 9.63e-12 | 6 |
abdominal cavity | 9.63e-12 | 6 |
visceral peritoneum | 9.63e-12 | 6 |
blood vessel layer | 1.02e-09 | 7 |
muscle structure | 1.93e-07 | 2 |
muscle organ | 1.93e-07 | 2 |
hair root sheath | 7.80e-07 | 2 |
hair outer root sheath | 7.80e-07 | 2 |
bulb of hair follicle | 7.80e-07 | 2 |