FFCP PHASE1:Hg19::chr10:98716932..98716936,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:98716932..98716936,+ | |||
|description=CAGE_peak_at_chr10:98716932..98716936,+ | |description=CAGE_peak_at_chr10:98716932..98716936,+ | ||
|id=chr10:98716932..98716936,+ | |id=chr10:98716932..98716936,+ | ||
|ontology_enrichment_celltype=CL:0002087!1.08e-12!119;CL:0000738!2.54e-12!140;CL:0000860!1.03e-11!45;CL:0002057!1.16e-11!42;CL:0002031!4.07e-11!124;CL:0000037!2.29e-09!172;CL:0000566!2.29e-09!172;CL:0002032!6.96e-09!165;CL:0000837!6.96e-09!165;CL:0000988!5.13e-08!182;CL:0002009!1.29e-07!65;CL:0000766!2.25e-07!76;CL:0002194!4.37e-07!63;CL:0000576!4.37e-07!63;CL:0000040!4.37e-07!63;CL:0000559!4.37e-07!63 | |ontology_enrichment_celltype=CL:0002087!1.08e-12!119;CL:0000738!2.54e-12!140;CL:0000860!1.03e-11!45;CL:0002057!1.16e-11!42;CL:0002031!4.07e-11!124;CL:0000037!2.29e-09!172;CL:0000566!2.29e-09!172;CL:0002032!6.96e-09!165;CL:0000837!6.96e-09!165;CL:0000988!5.13e-08!182;CL:0002009!1.29e-07!65;CL:0000766!2.25e-07!76;CL:0002194!4.37e-07!63;CL:0000576!4.37e-07!63;CL:0000040!4.37e-07!63;CL:0000559!4.37e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000094;1.04e-09;8!CL:0000236;1.44e-08;13!CL:0000775;1.42e-07;3!CL:0000623;2.75e-07;3!CL:0000081;4.55e-07;11!CL:0000322;5.25e-07;3 | |ontology_enrichment_celltype_v019=CL:0000094;1.04e-09;8!CL:0000236;1.44e-08;13!CL:0000775;1.42e-07;3!CL:0000623;2.75e-07;3!CL:0000081;4.55e-07;11!CL:0000322;5.25e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.21e-09,8;CL:0000236,6.86e-08,14;CL:0000775,1.38e-07,3;CL:0000623,4.39e-07,3;CL:0000825,4.39e-07,3;CL:0000081,5.04e-07,11;CL:0000838,6.20e-07,52;CL:0000542,9.04e-07,53;CL:0000051,9.04e-07,53 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.43e-07;3 | |ontology_enrichment_development_v019=UBERON:0006215;2.43e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3910;4.19e-10;2 | |ontology_enrichment_disease_v019=DOID:3910;4.19e-10;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,1.51e-09,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;4.19e-10;2!UBERON:0002173;4.19e-10;2!UBERON:0002186;4.19e-10;2!UBERON:0002114;2.43e-07;2!UBERON:0004821;5.25e-07;3!UBERON:0007499;5.25e-07;3!UBERON:0003215;5.25e-07;3!UBERON:0010368;5.25e-07;3!UBERON:0009911;5.25e-07;3!UBERON:0002299;5.25e-07;3!UBERON:0006524;5.25e-07;3!UBERON:0008874;5.25e-07;3!UBERON:0002169;5.25e-07;3!UBERON:0004894;5.25e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0004903;4.19e-10;2!UBERON:0002173;4.19e-10;2!UBERON:0002186;4.19e-10;2!UBERON:0002114;2.43e-07;2!UBERON:0004821;5.25e-07;3!UBERON:0007499;5.25e-07;3!UBERON:0003215;5.25e-07;3!UBERON:0010368;5.25e-07;3!UBERON:0009911;5.25e-07;3!UBERON:0002299;5.25e-07;3!UBERON:0006524;5.25e-07;3!UBERON:0008874;5.25e-07;3!UBERON:0002169;5.25e-07;3!UBERON:0004894;5.25e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.51e-09,2;UBERON:0002173,1.51e-09,2;UBERON:0002186,1.51e-09,2;UBERON:0002114,3.77e-07,2 | |||
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| ||
|short_description=p@chr10:98716932..98716936,+ | |short_description=p@chr10:98716932..98716936,+ | ||
}} | }} |
Latest revision as of 17:12, 23 July 2015
Short description: | p@chr10:98716932..98716936, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:98716932..98716936, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.21e-09 | 8 |
B cell | 6.86e-08 | 14 |
neutrophil | 1.38e-07 | 3 |
natural killer cell | 4.39e-07 | 3 |
pro-NK cell | 4.39e-07 | 3 |
blood cell | 5.04e-07 | 11 |
lymphoid lineage restricted progenitor cell | 6.20e-07 | 52 |
lymphocyte | 9.04e-07 | 53 |
common lymphoid progenitor | 9.04e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.51e-09 | 2 |
alveolar duct | 1.51e-09 | 2 |
bronchiole | 1.51e-09 | 2 |
duodenum | 3.77e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.51e-09 | 2 |