FFCP PHASE1:Hg19::chr10:5666877..5666895,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000441526_5end | |association_with_transcript=0bp_to_ENST00000441526_5end | ||
|cluster_id=chr10:5666877..5666895,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_1_at_ENST00000441526_5end | |description=CAGE_peak_1_at_ENST00000441526_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000228;2.70e-40;1!CL:0002372;2.70e-40;1!CL:0000056;3.60e-11;4!CL:0000244;3.60e-11;4!CL:0000737;3.60e-11;4!CL:0000731;3.60e-11;4!CL:0000680;6.21e-07;7 | |ontology_enrichment_celltype_v019=CL:0000228;2.70e-40;1!CL:0002372;2.70e-40;1!CL:0000056;3.60e-11;4!CL:0000244;3.60e-11;4!CL:0000737;3.60e-11;4!CL:0000731;3.60e-11;4!CL:0000680;6.21e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000228,3.30e-40,1;CL:0002372,3.30e-40,1;CL:0000244,3.42e-11,4;CL:0000731,3.42e-11,4;CL:0000737,3.79e-11,4;CL:0000515,3.79e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10!CL:0000515;3.60e-11;4 | |ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10!CL:0000515;3.60e-11;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0000365;3.35e-09;5!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22!UBERON:0005910;7.01e-08;6 | |ontology_enrichment_uberon_v019=UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0000365;3.35e-09;5!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22!UBERON:0005910;7.01e-08;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.64e-21,8;UBERON:0003135,1.62e-15,11;UBERON:0000365,3.22e-09,5;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22;UBERON:0005910,6.78e-08,6 | |||
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| ||
|short_description=p1@ENST00000441526 | |short_description=p1@ENST00000441526 | ||
}} | }} |
Latest revision as of 14:14, 23 July 2015
Short description: | p1@ENST00000441526 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000441526_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000441526_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 3.30e-40 | 1 |
myotube | 3.30e-40 | 1 |
transitional epithelial cell | 3.42e-11 | 4 |
urothelial cell | 3.42e-11 | 4 |
striated muscle cell | 3.79e-11 | 4 |
skeletal muscle myoblast | 3.79e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 6.64e-21 | 8 |
male reproductive organ | 1.62e-15 | 11 |
urothelium | 3.22e-09 | 5 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
transitional epithelium | 6.78e-08 | 6 |