FFCP PHASE1:Hg19::chr6:54172653..54172665,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27283 | |EntrezGene=27283 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14599 | |HGNC=14599 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000486436_5end | |association_with_transcript=0bp_to_ENST00000486436_5end | ||
|cluster_id=chr6:54172653..54172665,+ | |||
|coexpression_cluster_id=C51 | |coexpression_cluster_id=C51 | ||
|description=CAGE_peak_2_at_TINAG_5end | |description=CAGE_peak_2_at_TINAG_5end | ||
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|ontology_enrichment_celltype=CL:1000507!2.75e-21!12;CL:1000494!2.75e-21!12;CL:1000497!6.58e-19!18;CL:0002518!6.58e-19!18;CL:1000449!7.51e-16!16;CL:0000239!1.16e-10!3;CL:1000615!1.16e-10!3;CL:0002306!1.16e-10!3;CL:0002681!4.40e-09!13;CL:0002584!4.40e-09!13 | |ontology_enrichment_celltype=CL:1000507!2.75e-21!12;CL:1000494!2.75e-21!12;CL:1000497!6.58e-19!18;CL:0002518!6.58e-19!18;CL:1000449!7.51e-16!16;CL:0000239!1.16e-10!3;CL:1000615!1.16e-10!3;CL:0002306!1.16e-10!3;CL:0002681!4.40e-09!13;CL:0002584!4.40e-09!13 | ||
|ontology_enrichment_celltype_v019=CL:1000507;7.36e-09;10!CL:1000494;7.36e-09;10!CL:0000945;4.36e-08;24 | |ontology_enrichment_celltype_v019=CL:1000507;7.36e-09;10!CL:1000494;7.36e-09;10!CL:0000945;4.36e-08;24 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,8.96e-09,10;CL:1000494,8.96e-09,10;CL:0000945,4.00e-08,24;CL:0000826,4.00e-08,24 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;3.34e-11;2 | |ontology_enrichment_disease_v019=DOID:3493;3.34e-11;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,3.35e-11,2 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0004810,8.96e-09,10;UBERON:0002113,1.79e-07,26;UBERON:0003918,1.79e-07,26;UBERON:0011143,1.79e-07,26;UBERON:0005095,1.79e-07,26;UBERON:0007687,1.79e-07,26 | |||
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|short_description=p2@TINAG | |short_description=p2@TINAG | ||
}} | }} |
Latest revision as of 08:16, 19 September 2015
Short description: | p2@TINAG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TINAG_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 0bp_to_ENST00000486436_5end |
EntrezGene: | TINAG |
HGNC: | 14599 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 8.96e-09 | 10 |
nephron tubule epithelial cell | 8.96e-09 | 10 |
lymphocyte of B lineage | 4.00e-08 | 24 |
pro-B cell | 4.00e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 8.96e-09 | 10 |
kidney | 1.79e-07 | 26 |
kidney mesenchyme | 1.79e-07 | 26 |
upper urinary tract | 1.79e-07 | 26 |
kidney rudiment | 1.79e-07 | 26 |
kidney field | 1.79e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.35e-11 | 2 |