FFCP PHASE1:Hg19::chr11:2019065..2019078,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283120 | |EntrezGene=283120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000535745,NR_002196,uc001lvc.1_5end | |association_with_transcript=0bp_to_ENST00000535745,NR_002196,uc001lvc.1_5end | ||
|cluster_id=chr11:2019065..2019078,- | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_2_at_H19_5end | |description=CAGE_peak_2_at_H19_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.50e-12;19!CL:0000188;1.93e-07;9 | |ontology_enrichment_celltype_v019=CL:0000349;1.50e-12;19!CL:0000188;1.93e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.46e-12,19;CL:0000188,1.90e-07,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.18e-13!347;UBERON:0003104!5.25e-12!238;UBERON:0009142!5.25e-12!238;UBERON:0005631!3.84e-10!14;UBERON:0000158!3.84e-10!14;UBERON:0004119!6.83e-10!169;UBERON:0000925!6.83e-10!169;UBERON:0006595!6.83e-10!169;UBERON:0001557!8.22e-10!19;UBERON:0004923!1.53e-09!57;UBERON:0003103!3.78e-09!69;UBERON:0001737!5.03e-09!9;UBERON:0000064!7.66e-09!219;UBERON:0004921!1.51e-08!129;UBERON:0004185!1.51e-08!129;UBERON:0000478!3.36e-08!24;UBERON:0000077!3.39e-08!130;UBERON:0000468!3.58e-08!659;UBERON:0003124!5.31e-08!7;UBERON:0001041!6.83e-08!98;UBERON:0001007!1.50e-07!155;UBERON:0001555!1.50e-07!155;UBERON:0007026!1.50e-07!155;UBERON:0001048!7.48e-07!168;UBERON:0000922!9.14e-07!612 | |ontology_enrichment_uberon=UBERON:0000481!1.18e-13!347;UBERON:0003104!5.25e-12!238;UBERON:0009142!5.25e-12!238;UBERON:0005631!3.84e-10!14;UBERON:0000158!3.84e-10!14;UBERON:0004119!6.83e-10!169;UBERON:0000925!6.83e-10!169;UBERON:0006595!6.83e-10!169;UBERON:0001557!8.22e-10!19;UBERON:0004923!1.53e-09!57;UBERON:0003103!3.78e-09!69;UBERON:0001737!5.03e-09!9;UBERON:0000064!7.66e-09!219;UBERON:0004921!1.51e-08!129;UBERON:0004185!1.51e-08!129;UBERON:0000478!3.36e-08!24;UBERON:0000077!3.39e-08!130;UBERON:0000468!3.58e-08!659;UBERON:0003124!5.31e-08!7;UBERON:0001041!6.83e-08!98;UBERON:0001007!1.50e-07!155;UBERON:0001555!1.50e-07!155;UBERON:0007026!1.50e-07!155;UBERON:0001048!7.48e-07!168;UBERON:0000922!9.14e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.76e-14;16!UBERON:0002036;1.76e-14;16!UBERON:0000478;2.66e-12;24!UBERON:0001737;5.31e-12;9!UBERON:0001557;5.31e-12;9!UBERON:0005631;4.20e-09;10!UBERON:0000158;4.20e-09;10!UBERON:0001987;8.37e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001134;1.76e-14;16!UBERON:0002036;1.76e-14;16!UBERON:0000478;2.66e-12;24!UBERON:0001737;5.31e-12;9!UBERON:0001557;5.31e-12;9!UBERON:0005631;4.20e-09;10!UBERON:0000158;4.20e-09;10!UBERON:0001987;8.37e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.47e-14,14;UBERON:0000158,4.47e-14,14;UBERON:0000478,2.59e-12,24;UBERON:0001737,5.50e-12,9;UBERON:0001557,1.81e-11,19;UBERON:0003124,1.47e-10,7;UBERON:0003104,2.21e-10,160;UBERON:0009142,2.21e-10,160;UBERON:0001041,5.18e-09,87;UBERON:0004921,2.71e-08,118;UBERON:0003103,3.47e-08,68;UBERON:0004119,1.99e-07,160;UBERON:0000925,1.99e-07,160;UBERON:0006595,1.99e-07,160;UBERON:0005256,7.12e-07,122;UBERON:0001987,8.38e-07,4;UBERON:0004340,8.38e-07,4 | |||
|phase1_expression=0.908391896352783,0.856402095563933,0.140954404095971,0,3.12872766099101,13.9574163856059,0,0.631719873426831,0.261185628199839,1.96587149201207,9.07141518364156,65.3139702669215,90.735840510588,2.22779435328084,18.2268556650354,0,0,0,0,0.246242116153576,0.408001382488506,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0,0,5.41856431606266,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,1.34140171940727,11.7633556896048,0,1.50401373190767,0.579386075843295,0.795285947051099,2.91980922181582,0.0945348171640679,0,0.175669571386252,1.70272798147026,0,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0.860509862246441,0.354668382198357,18.5023608046961,0,0.24666754841716,9.95875313279252,1.0776853765575,1.14423332179421,9.23280308634082,53.0081850521599,3.98346434117454,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0.910161361938026,0,0,0.375355559615893,0,0,0,0,0.453728732640084,0,0.213557388818567,0,0,0,0,0,0,0,0,0,1.13152239773168,0,0,0,0,0,0,0,0,7.90118811512725,3.83545903556871,3.28017106138317,0,0,0,0,0,0,44.2467432149016,28.6593973132773,32.7775000641535,47.2058203294646,36.3858671634318,35.3533222475534,51.2358971008625,30.4143270944286,43.4764287349421,1.4763109092493,18.231430594448,8.6430542379594,102.906097969879,0,0,11.2250082269467,0,0,0.343135620597051,0,0,0,40.6463274245945,0.325808305310325,0,0,6.26024186865415,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0.257207374262142,0,0,3.86040582876998,290.845180489813,4.93944202068461,0,10.6617584622764,11.087326221068,0,0,0,0,0,0,0,0,0,8.39731578671959,11.7121503853719,26.6800835227444,0,0,0,0,0,0,1.54657762555539,0.167516265334349,0,0,0,0,19.9987131502198,3.50119364741774,7.05289061619313,0,0,0,0,12.6397361885642,0,26.9029985360513,0,1.29058417979192,0,190.122923896321,211.376349067487,0,0,0,70.9318517184247,69.9028845944088,250.983943463635,0.496215615637554,0,3.36792113319688,0.128139149255701,1.53512174720011,0.965123526861645,29.6836132889982,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0.451199612907412,0,1.56869953835371,0,0,3.4120015221269,0.170093705276516,0.647747748306418,4.62681758070868,0.812839312631559,2.50844886927427,0,0,0,0,0,0.256450125116389,0.656029291399411,0,21.6386124460217,0,0,0,0,1.6068392984416,6.67027956215642,4.62145851343933,10.4382498813768,12.6809646685768,2.14840489736547,7.39585138962565,8.94879587869059,34.7224939022276,0.165284915360978,0,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,1.48863347743867,5.06207079549961,0.953150969619124,2.04718233049067,44.9335937435616,0,0,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0,6.82687234725426,0,0,0,0,0,0,0,0,0,9.83842128069949,0,0,0,5.0193973271418,39.1031183232222,0,0,0.211107635297664,0.658589785919804,4.55367808518858,4.54915136318478,0,0,0,20.2409171670075,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75809815126273,0,0,0,495.394805830707,228.068874879466,1089.49901034598,0,0,0,0,0,0.996239941255349,0,4.53478946137697,0,0,0,0,0,0,11.3439916482474,0,0,0,0.0927680981618513,0,0,0,3.62499787717397,0.682760689712998,0.254253650292766,1.41832609060762,0.344743373241465,0,0,0,0,0,0,0,0,0,0,7.8489263673873,0,1.38338342632836,14.5407383943831,19.5565269459615,275.298000848646,20.4262633286153,318.221761283125,0,0,0,0.676786981851542,1.17637520590644,0.671286347903371,0,0,0,0,0,0,0,6.5458597732471,26.8853263770795,0,0,0,0.269604531922708,85.8758082609704,0,0,0,0,0.789168805698781,8.46935012340647,0,0.884612114798832,0,0,0,0,0,0,0,0,0,0,0,4.89234671077684,0,0.580537987734511,0,0.0821154570532092,4.17052770900203,0.176512253383001,15.5926711138567,0,0,0,0.586654148204409,0,0.85381197895741,37.7640162110226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67569440763353,1.14580212005842,5.74298419661451,1.39775300349294,4.29226048136571,31.6903469567459,38.6304966798676,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,2.12775409707835,30.5285702945689,0,0,0,4.2881719582402,0.662091970365432,1.017074150619,0,0,0,0,0,0,0,7.18105945022604,67.5785133452329,0,0,0,0,0.961086713109252,13.2051616283719,1.24271716604159,1.48849806543585,0,0,0,0.544017803369474,1.5041393641362,0.306345576763462,0,0,0,0,0,0,0,0.124192805882767,0,0.37494122388632,0,0,0,0,0,0,0.467426619694449,0,0,0.251567901752575,0,0,0.756154618816195,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,2.00013882331577,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,3.11038630016486,0,14.1250502929653,0,12.6683180302736,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,2.71330363699803,0.550285795565037,158.270162625963,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| ||
|short_description=p2@H19 | |short_description=p2@H19 | ||
}} | }} |
Latest revision as of 06:59, 17 September 2015
Short description: | p2@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_H19_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 0bp_to_ENST00000535745, NR_002196, uc001lvc.1_5end |
EntrezGene: | H19 |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.46e-12 | 19 |
cell of skeletal muscle | 1.90e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.47e-14 | 14 |
membranous layer | 4.47e-14 | 14 |
extraembryonic structure | 2.59e-12 | 24 |
larynx | 5.50e-12 | 9 |
upper respiratory tract | 1.81e-11 | 19 |
chorion | 1.47e-10 | 7 |
mesenchyme | 2.21e-10 | 160 |
entire embryonic mesenchyme | 2.21e-10 | 160 |
foregut | 5.18e-09 | 87 |
subdivision of digestive tract | 2.71e-08 | 118 |
compound organ | 3.47e-08 | 68 |
endoderm-derived structure | 1.99e-07 | 160 |
endoderm | 1.99e-07 | 160 |
presumptive endoderm | 1.99e-07 | 160 |
trunk mesenchyme | 7.12e-07 | 122 |
placenta | 8.38e-07 | 4 |
allantois | 8.38e-07 | 4 |