FFCP PHASE1:Hg19::chr17:73753525..73753536,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:73753525..73753536,+ | |||
|coexpression_cluster_id=C436 | |coexpression_cluster_id=C436 | ||
|description=CAGE_peak_at_chr17:73753525..73753536,+ | |description=CAGE_peak_at_chr17:73753525..73753536,+ | ||
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|ontology_enrichment_celltype=CL:0000066!1.67e-22!254;CL:0002076!2.35e-21!43;CL:0000223!2.62e-17!59;CL:0002251!8.34e-13!21;CL:0002368!1.48e-10!13;CL:0000076!6.61e-10!62 | |ontology_enrichment_celltype=CL:0000066!1.67e-22!254;CL:0002076!2.35e-21!43;CL:0000223!2.62e-17!59;CL:0002251!8.34e-13!21;CL:0002368!1.48e-10!13;CL:0000076!6.61e-10!62 | ||
|ontology_enrichment_celltype_v019=CL:0000240;3.55e-28;6!CL:0000311;3.55e-28;6!CL:0000079;3.55e-28;6!CL:0000237;3.55e-28;6!CL:0000244;2.53e-24;4!CL:0000731;2.53e-24;4!CL:0002076;4.77e-21;42!CL:0002368;6.47e-20;13!CL:0000312;1.53e-19;5!CL:0000362;4.20e-19;9!CL:0002231;3.33e-15;3!CL:0000307;7.52e-15;3!CL:0002621;7.52e-15;3!CL:0002159;2.25e-12;14!CL:0002336;9.10e-12;1!CL:0002261;9.10e-12;1!CL:0002170;9.10e-12;1!CL:0002202;5.28e-11;9!CL:0002632;5.28e-11;9!CL:0000317;9.69e-07;2!CL:1000448;9.69e-07;2!CL:0002308;9.69e-07;2!CL:0002140;9.69e-07;2 | |ontology_enrichment_celltype_v019=CL:0000240;3.55e-28;6!CL:0000311;3.55e-28;6!CL:0000079;3.55e-28;6!CL:0000237;3.55e-28;6!CL:0000244;2.53e-24;4!CL:0000731;2.53e-24;4!CL:0002076;4.77e-21;42!CL:0002368;6.47e-20;13!CL:0000312;1.53e-19;5!CL:0000362;4.20e-19;9!CL:0002231;3.33e-15;3!CL:0000307;7.52e-15;3!CL:0002621;7.52e-15;3!CL:0002159;2.25e-12;14!CL:0002336;9.10e-12;1!CL:0002261;9.10e-12;1!CL:0002170;9.10e-12;1!CL:0002202;5.28e-11;9!CL:0002632;5.28e-11;9!CL:0000317;9.69e-07;2!CL:1000448;9.69e-07;2!CL:0002308;9.69e-07;2!CL:0002140;9.69e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000240,4.10e-28,6;CL:0000311,4.10e-28,6;CL:0000079,4.10e-28,6;CL:0000237,4.10e-28,6;CL:0000036,4.10e-28,6;CL:0000357,4.10e-28,6;CL:0000114,4.10e-28,6;CL:0000244,1.40e-24,4;CL:0000731,1.40e-24,4;CL:0002076,2.35e-23,42;CL:0002368,7.76e-20,13;CL:0000312,1.16e-19,5;CL:0000362,3.33e-19,9;CL:0000223,1.49e-16,58;CL:0002231,2.42e-15,3;CL:0000068,8.08e-15,3;CL:0000069,8.08e-15,3;CL:0000307,8.08e-15,3;CL:0000377,8.08e-15,3;CL:0002621,8.67e-15,3;CL:0000066,1.46e-12,253;CL:0002159,1.94e-12,14;CL:0002336,1.81e-11,1;CL:0002261,1.81e-11,1;CL:0002170,1.81e-11,1;CL:0002202,5.77e-11,9;CL:0002632,5.77e-11,9;CL:0002321,4.22e-07,250;CL:0000317,9.44e-07,2;CL:1000448,9.44e-07,2;CL:0002308,9.44e-07,2;CL:0002140,9.44e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000357;3.55e-28;6!CL:0000114;3.55e-28;6!CL:0000377;7.52e-15;3!CL:0000223;2.26e-10;58 | |ontology_enrichment_development_v019=CL:0000357;3.55e-28;6!CL:0000114;3.55e-28;6!CL:0000377;7.52e-15;3!CL:0000223;2.26e-10;58 | ||
|ontology_enrichment_disease=DOID:1749!5.72e-11!14;DOID:305!2.22e-08!106;DOID:299!4.70e-07!25 | |ontology_enrichment_disease=DOID:1749!5.72e-11!14;DOID:305!2.22e-08!106;DOID:299!4.70e-07!25 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.33e-11!169;UBERON:0000925!1.33e-11!169;UBERON:0006595!1.33e-11!169;UBERON:0001004!3.86e-08!72;UBERON:0004121!4.45e-08!169;UBERON:0003729!6.68e-08!5;UBERON:0000924!1.21e-07!173;UBERON:0006601!1.21e-07!173;UBERON:0000153!1.22e-07!129;UBERON:0007811!1.22e-07!129;UBERON:0000166!1.32e-07!21;UBERON:0000161!2.27e-07!35;UBERON:0000033!3.01e-07!123;UBERON:0001007!3.18e-07!155;UBERON:0001555!3.18e-07!155;UBERON:0007026!3.18e-07!155 | |ontology_enrichment_uberon=UBERON:0004119!1.33e-11!169;UBERON:0000925!1.33e-11!169;UBERON:0006595!1.33e-11!169;UBERON:0001004!3.86e-08!72;UBERON:0004121!4.45e-08!169;UBERON:0003729!6.68e-08!5;UBERON:0000924!1.21e-07!173;UBERON:0006601!1.21e-07!173;UBERON:0000153!1.22e-07!129;UBERON:0007811!1.22e-07!129;UBERON:0000166!1.32e-07!21;UBERON:0000161!2.27e-07!35;UBERON:0000033!3.01e-07!123;UBERON:0001007!3.18e-07!155;UBERON:0001555!3.18e-07!155;UBERON:0007026!3.18e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0000486;9.21e-22;12!UBERON:0000365;1.35e-19;5!UBERON:0005910;1.95e-16;6!UBERON:0001949;7.52e-15;3!UBERON:0001003;1.45e-11;15!UBERON:0007376;1.45e-11;15!UBERON:0010371;1.52e-11;31!UBERON:0003729;8.89e-08;13!UBERON:0005911;1.02e-07;36!UBERON:0003126;7.19e-07;7!UBERON:0003929;7.19e-07;7!UBERON:0001005;7.19e-07;7!UBERON:0007196;8.37e-07;15!UBERON:0001558;8.37e-07;15!UBERON:0002419;9.69e-07;2!UBERON:0007771;9.69e-07;2!UBERON:0003297;9.69e-07;2!UBERON:0001821;9.69e-07;2!UBERON:0003487;9.69e-07;2!UBERON:0001820;9.69e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000486;9.21e-22;12!UBERON:0000365;1.35e-19;5!UBERON:0005910;1.95e-16;6!UBERON:0001949;7.52e-15;3!UBERON:0001003;1.45e-11;15!UBERON:0007376;1.45e-11;15!UBERON:0010371;1.52e-11;31!UBERON:0003729;8.89e-08;13!UBERON:0005911;1.02e-07;36!UBERON:0003126;7.19e-07;7!UBERON:0003929;7.19e-07;7!UBERON:0001005;7.19e-07;7!UBERON:0007196;8.37e-07;15!UBERON:0001558;8.37e-07;15!UBERON:0002419;9.69e-07;2!UBERON:0007771;9.69e-07;2!UBERON:0003297;9.69e-07;2!UBERON:0001821;9.69e-07;2!UBERON:0003487;9.69e-07;2!UBERON:0001820;9.69e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,8.41e-20,5;UBERON:0005910,1.31e-16,6;UBERON:0001949,8.67e-15,3;UBERON:0001003,1.27e-11,15;UBERON:0007376,1.27e-11,15;UBERON:0007383,1.27e-11,15;UBERON:0004119,4.85e-09,160;UBERON:0000925,4.85e-09,160;UBERON:0006595,4.85e-09,160;UBERON:0003729,1.09e-07,13;UBERON:0003102,1.85e-07,99;UBERON:0005911,2.57e-07,82;UBERON:0003126,7.41e-07,7;UBERON:0001005,7.41e-07,7;UBERON:0007196,8.81e-07,15;UBERON:0001558,8.81e-07,15;UBERON:0002419,9.44e-07,2;UBERON:0007771,9.44e-07,2;UBERON:0003297,9.44e-07,2;UBERON:0001821,9.44e-07,2;UBERON:0003487,9.44e-07,2;UBERON:0001820,9.44e-07,2;UBERON:0005089,9.44e-07,2;UBERON:0005088,9.44e-07,2 | |||
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|short_description=p@chr17:73753525..73753536,+ | |short_description=p@chr17:73753525..73753536,+ | ||
}} | }} |
Latest revision as of 21:12, 25 July 2015
Short description: | p@chr17:73753525..73753536, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:73753525..73753536, + |
Coexpression cluster: | C436_Sebocyte_Prostate_Keratinocyte_Urothelial_Small_Mammary_salivary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urothelium | 8.41e-20 | 5 |
transitional epithelium | 1.31e-16 | 6 |
gingival epithelium | 8.67e-15 | 3 |
skin epidermis | 1.27e-11 | 15 |
outer epithelium | 1.27e-11 | 15 |
enveloping layer of ectoderm | 1.27e-11 | 15 |
endoderm-derived structure | 4.85e-09 | 160 |
endoderm | 4.85e-09 | 160 |
presumptive endoderm | 4.85e-09 | 160 |
mouth mucosa | 1.09e-07 | 13 |
surface structure | 1.85e-07 | 99 |
endo-epithelium | 2.57e-07 | 82 |
trachea | 7.41e-07 | 7 |
respiratory airway | 7.41e-07 | 7 |
tracheobronchial tree | 8.81e-07 | 15 |
lower respiratory tract | 8.81e-07 | 15 |
skin gland | 9.44e-07 | 2 |
epidermis gland | 9.44e-07 | 2 |
gland of integumental system | 9.44e-07 | 2 |
sebaceous gland | 9.44e-07 | 2 |
skin sebaceous gland | 9.44e-07 | 2 |
sweat gland | 9.44e-07 | 2 |
sweat gland placode | 9.44e-07 | 2 |
sebaceous gland placode | 9.44e-07 | 2 |