FFCP PHASE1:Hg19::chr7:45952626..45952637,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3486 | |EntrezGene=3486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5472 | |HGNC=5472 | ||
|TSSclassifier=strong | |||
|UniProt=Q71RC0 | |UniProt=Q71RC0 | ||
|association_with_transcript=0bp_to_AF370418_5end | |association_with_transcript=0bp_to_AF370418_5end | ||
|cluster_id=chr7:45952626..45952637,- | |||
|coexpression_cluster_id=C223 | |coexpression_cluster_id=C223 | ||
|description=CAGE_peak_23_at_IGFBP3_5end | |description=CAGE_peak_23_at_IGFBP3_5end | ||
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|ontology_enrichment_celltype=CL:0002620!3.53e-11!23;CL:0002334!5.32e-11!12;CL:0000057!1.48e-10!75;CL:0002595!2.14e-08!5;CL:0000055!3.06e-08!180;CL:0000153!6.37e-07!9;CL:0000447!6.37e-07!9 | |ontology_enrichment_celltype=CL:0002620!3.53e-11!23;CL:0002334!5.32e-11!12;CL:0000057!1.48e-10!75;CL:0002595!2.14e-08!5;CL:0000055!3.06e-08!180;CL:0000153!6.37e-07!9;CL:0000447!6.37e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.45e-20;23!CL:0000138;8.98e-15;6!CL:0000153;1.16e-14;9!CL:0000447;1.16e-14;9!CL:0000327;4.53e-12;15!CL:0000499;1.11e-10;28!CL:0002537;9.37e-10;5!CL:0000135;9.38e-08;3!CL:0000388;9.38e-08;3 | |ontology_enrichment_celltype_v019=CL:0002620;4.45e-20;23!CL:0000138;8.98e-15;6!CL:0000153;1.16e-14;9!CL:0000447;1.16e-14;9!CL:0000327;4.53e-12;15!CL:0000499;1.11e-10;28!CL:0002537;9.37e-10;5!CL:0000135;9.38e-08;3!CL:0000388;9.38e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.52e-20,23;CL:0000058,9.01e-15,6;CL:0000138,9.01e-15,6;CL:0000153,1.14e-14,9;CL:0000447,1.14e-14,9;CL:0000327,5.11e-12,15;CL:0000057,1.51e-11,76;CL:0000499,1.06e-10,28;CL:0002537,8.84e-10,5;CL:0000135,6.80e-08,3;CL:0000388,6.80e-08,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!7.97e-09!5;DOID:450!7.97e-09!5;DOID:66!7.97e-09!5;DOID:423!7.97e-09!5;DOID:0080000!7.97e-09!5;DOID:11722!7.97e-09!5 | |ontology_enrichment_disease=DOID:17!7.97e-09!5;DOID:450!7.97e-09!5;DOID:66!7.97e-09!5;DOID:423!7.97e-09!5;DOID:0080000!7.97e-09!5;DOID:11722!7.97e-09!5 | ||
|ontology_enrichment_disease_v019=DOID:17;1.49e-09;5!DOID:450;1.49e-09;5!DOID:66;1.49e-09;5!DOID:423;1.49e-09;5!DOID:0080000;1.49e-09;5!DOID:11722;1.49e-09;5!DOID:0060084;1.92e-07;3!DOID:127;1.92e-07;3!DOID:2513;9.28e-07;1 | |ontology_enrichment_disease_v019=DOID:17;1.49e-09;5!DOID:450;1.49e-09;5!DOID:66;1.49e-09;5!DOID:423;1.49e-09;5!DOID:0080000;1.49e-09;5!DOID:11722;1.49e-09;5!DOID:0060084;1.92e-07;3!DOID:127;1.92e-07;3!DOID:2513;9.28e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:17,1.09e-09,5;DOID:450,1.09e-09,5;DOID:66,1.09e-09,5;DOID:423,1.09e-09,5;DOID:0080000,1.09e-09,5;DOID:11722,1.09e-09,5;DOID:0060084,1.34e-07,3;DOID:127,1.34e-07,3;DOID:2513,9.30e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!3.63e-09!6;UBERON:0002358!3.63e-09!6;UBERON:0003684!3.63e-09!6;UBERON:0001178!3.63e-09!6;UBERON:0003834!2.14e-08!5;UBERON:0001533!2.14e-08!5;UBERON:0002199!3.65e-08!45;UBERON:0002416!3.65e-08!45;UBERON:0005631!6.02e-08!14;UBERON:0000158!6.02e-08!14;UBERON:0002097!1.17e-07!40;UBERON:0003124!1.29e-07!7;UBERON:0004457!2.25e-07!12;UBERON:0000042!2.25e-07!12;UBERON:0004923!2.71e-07!57;UBERON:0003513!4.43e-07!8;UBERON:0000478!9.05e-07!24 | |ontology_enrichment_uberon=UBERON:0003688!3.63e-09!6;UBERON:0002358!3.63e-09!6;UBERON:0003684!3.63e-09!6;UBERON:0001178!3.63e-09!6;UBERON:0003834!2.14e-08!5;UBERON:0001533!2.14e-08!5;UBERON:0002199!3.65e-08!45;UBERON:0002416!3.65e-08!45;UBERON:0005631!6.02e-08!14;UBERON:0000158!6.02e-08!14;UBERON:0002097!1.17e-07!40;UBERON:0003124!1.29e-07!7;UBERON:0004457!2.25e-07!12;UBERON:0000042!2.25e-07!12;UBERON:0004923!2.71e-07!57;UBERON:0003513!4.43e-07!8;UBERON:0000478!9.05e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;6.16e-11;41!UBERON:0005631;2.26e-08;10!UBERON:0000158;2.26e-08;10!UBERON:0002199;7.09e-08;46!UBERON:0002416;7.09e-08;46!UBERON:0007846;9.38e-08;3!UBERON:0000043;9.38e-08;3!UBERON:0007845;9.38e-08;3!UBERON:0000305;4.35e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0002097;6.16e-11;41!UBERON:0005631;2.26e-08;10!UBERON:0000158;2.26e-08;10!UBERON:0002199;7.09e-08;46!UBERON:0002416;7.09e-08;46!UBERON:0007846;9.38e-08;3!UBERON:0000043;9.38e-08;3!UBERON:0007845;9.38e-08;3!UBERON:0000305;4.35e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,8.26e-13,41;UBERON:0002199,3.47e-11,46;UBERON:0002416,3.47e-11,46;UBERON:0007846,6.80e-08,3;UBERON:0000043,6.80e-08,3;UBERON:0007845,6.80e-08,3;UBERON:0000305,4.17e-07,7 | |||
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|short_description=p23@IGFBP3 | |short_description=p23@IGFBP3 | ||
}} | }} |
Latest revision as of 19:24, 18 September 2015
Short description: | p23@IGFBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_IGFBP3_5end |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | 0bp_to_AF370418_5end |
EntrezGene: | IGFBP3 |
HGNC: | 5472 |
UniProt: | Q71RC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 4.52e-20 | 23 |
chondroblast | 9.01e-15 | 6 |
chondrocyte | 9.01e-15 | 6 |
GAG secreting cell | 1.14e-14 | 9 |
carbohydrate secreting cell | 1.14e-14 | 9 |
extracellular matrix secreting cell | 5.11e-12 | 15 |
fibroblast | 1.51e-11 | 76 |
stromal cell | 1.06e-10 | 28 |
amnion mesenchymal stem cell | 8.84e-10 | 5 |
fibrocyte | 6.80e-08 | 3 |
tendon cell | 6.80e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 8.26e-13 | 41 |
integument | 3.47e-11 | 46 |
integumental system | 3.47e-11 | 46 |
dense regular connective tissue | 6.80e-08 | 3 |
tendon | 6.80e-08 | 3 |
regular connective tissue | 6.80e-08 | 3 |
amnion | 4.17e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.09e-09 | 5 |
myotonic disease | 1.09e-09 | 5 |
muscle tissue disease | 1.09e-09 | 5 |
myopathy | 1.09e-09 | 5 |
muscular disease | 1.09e-09 | 5 |
myotonic dystrophy | 1.09e-09 | 5 |
cell type benign neoplasm | 1.34e-07 | 3 |
leiomyoma | 1.34e-07 | 3 |
basal cell carcinoma | 9.30e-07 | 1 |