FFCP PHASE1:Hg19::chr12:57570902..57570937,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:57570902..57570937,+ | |||
|coexpression_cluster_id=C234 | |coexpression_cluster_id=C234 | ||
|description=CAGE_peak_at_chr12:57570902..57570937,+ | |description=CAGE_peak_at_chr12:57570902..57570937,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;4.86e-10;1!UBERON:0003099;1.76e-09;1!UBERON:0003852;1.76e-09;1 | |ontology_enrichment_development_v019=UBERON:0009143;4.86e-10;1!UBERON:0003099;1.76e-09;1!UBERON:0003852;1.76e-09;1 | ||
|ontology_enrichment_disease=DOID:1749!3.53e-08!14 | |ontology_enrichment_disease=DOID:1749!3.53e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.34e-21;14!DOID:3151;1.76e-09;1!DOID:3149;1.76e-09;1 | |ontology_enrichment_disease_v019=DOID:1749;1.34e-21;14!DOID:3151;1.76e-09;1!DOID:3149;1.76e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,1.39e-21,14;DOID:3151,2.08e-09,1;DOID:3149,2.08e-09,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000974;1.91e-13;6!UBERON:0000997;4.08e-10;1!UBERON:0005056;4.08e-10;1!UBERON:0004176;4.08e-10;1!UBERON:0002372;6.88e-10;1!UBERON:0001961;6.88e-10;1!UBERON:0001744;6.88e-10;1!UBERON:0001042;6.88e-10;1!UBERON:0001735;6.88e-10;1!UBERON:0003343;1.31e-09;4!UBERON:0004785;1.31e-09;4!UBERON:0005705;1.76e-09;1!UBERON:0008193;1.76e-09;1!UBERON:0010912;1.76e-09;1!UBERON:0002514;1.76e-09;1!UBERON:0003457;1.76e-09;1!UBERON:0008907;1.76e-09;1!UBERON:0008001;1.76e-09;1!UBERON:0007213;1.76e-09;1!UBERON:0009891;1.76e-09;1!UBERON:0007914;1.76e-09;1!UBERON:0007375;1.76e-09;1!UBERON:0003323;1.76e-09;1!UBERON:0010258;1.76e-09;1!UBERON:0005253;1.76e-09;1!UBERON:0007842;1.76e-09;1!UBERON:0002397;1.76e-09;1!UBERON:0003113;1.76e-09;1!UBERON:0003277;1.76e-09;1!UBERON:0001709;1.76e-09;1!UBERON:0002244;1.76e-09;1!UBERON:0005620;1.76e-09;1!UBERON:0010364;1.76e-09;1!UBERON:0004288;1.76e-09;1 | |ontology_enrichment_uberon_v019=UBERON:0000974;1.91e-13;6!UBERON:0000997;4.08e-10;1!UBERON:0005056;4.08e-10;1!UBERON:0004176;4.08e-10;1!UBERON:0002372;6.88e-10;1!UBERON:0001961;6.88e-10;1!UBERON:0001744;6.88e-10;1!UBERON:0001042;6.88e-10;1!UBERON:0001735;6.88e-10;1!UBERON:0003343;1.31e-09;4!UBERON:0004785;1.31e-09;4!UBERON:0005705;1.76e-09;1!UBERON:0008193;1.76e-09;1!UBERON:0010912;1.76e-09;1!UBERON:0002514;1.76e-09;1!UBERON:0003457;1.76e-09;1!UBERON:0008907;1.76e-09;1!UBERON:0008001;1.76e-09;1!UBERON:0007213;1.76e-09;1!UBERON:0009891;1.76e-09;1!UBERON:0007914;1.76e-09;1!UBERON:0007375;1.76e-09;1!UBERON:0003323;1.76e-09;1!UBERON:0010258;1.76e-09;1!UBERON:0005253;1.76e-09;1!UBERON:0007842;1.76e-09;1!UBERON:0002397;1.76e-09;1!UBERON:0003113;1.76e-09;1!UBERON:0003277;1.76e-09;1!UBERON:0001709;1.76e-09;1!UBERON:0002244;1.76e-09;1!UBERON:0005620;1.76e-09;1!UBERON:0010364;1.76e-09;1!UBERON:0004288;1.76e-09;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,4.09e-10,1;UBERON:0005056,4.09e-10,1;UBERON:0002372,6.88e-10,1;UBERON:0001961,6.88e-10,1;UBERON:0001744,6.88e-10,1;UBERON:0001735,6.88e-10,1;UBERON:0003343,1.37e-09,4;UBERON:0004785,1.37e-09,4;UBERON:0000166,1.84e-09,22;UBERON:0005705,2.46e-09,1;UBERON:0008193,2.46e-09,1;UBERON:0010912,2.46e-09,1;UBERON:0002514,2.46e-09,1;UBERON:0003457,2.46e-09,1;UBERON:0008907,2.46e-09,1;UBERON:0008001,2.46e-09,1;UBERON:0007213,2.46e-09,1;UBERON:0009891,2.46e-09,1;UBERON:0007914,2.46e-09,1;UBERON:0009292,2.46e-09,1;UBERON:0003099,2.46e-09,1;UBERON:0007375,2.46e-09,1;UBERON:0003323,2.46e-09,1;UBERON:0010258,2.46e-09,1;UBERON:0007842,2.46e-09,1;UBERON:0009494,2.46e-09,1;UBERON:0010042,2.46e-09,1;UBERON:0010045,2.46e-09,1;UBERON:0010259,2.46e-09,1;UBERON:0010359,2.46e-09,1;UBERON:0009526,2.46e-09,1;UBERON:0002397,2.46e-09,1;UBERON:0003113,2.46e-09,1;UBERON:0003277,2.46e-09,1;UBERON:0001709,2.46e-09,1;UBERON:0004066,2.46e-09,1;UBERON:0002244,2.46e-09,1;UBERON:0005620,2.46e-09,1;UBERON:0004362,2.46e-09,1;UBERON:0010364,2.46e-09,1;UBERON:0010046,2.46e-09,1;UBERON:0005868,2.46e-09,1;UBERON:0007238,2.46e-09,1;UBERON:0004288,2.46e-09,1;UBERON:0004068,2.46e-09,1;UBERON:0010334,2.46e-09,1;UBERON:0003852,2.46e-09,1;UBERON:0010253,2.46e-09,1;UBERON:0000974,2.99e-08,10;UBERON:0000165,3.95e-07,29;UBERON:0000930,3.95e-07,29 | |||
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| ||
|short_description=p@chr12:57570902..57570937,+ | |short_description=p@chr12:57570902..57570937,+ | ||
}} | }} |
Latest revision as of 10:35, 24 July 2015
Short description: | p@chr12:57570902..57570937, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:57570902..57570937, + |
Coexpression cluster: | C234_oral_epidermoid_malignant_cervical_ductal_lung_keratoacanthoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.39e-21 | 14 |
skin squamous cell carcinoma | 2.08e-09 | 1 |
keratoacanthoma | 2.08e-09 | 1 |