FFCP PHASE1:Hg19::chr8:69901760..69901778,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:69901760..69901778,+ | |||
|coexpression_cluster_id=C1287 | |coexpression_cluster_id=C1287 | ||
|description=CAGE_peak_at_chr8:69901760..69901778,+ | |description=CAGE_peak_at_chr8:69901760..69901778,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002620!1.18e-22!23;CL:0000055!7.53e-13!180;CL:0000057!9.37e-09!75 | |ontology_enrichment_celltype=CL:0002620!1.18e-22!23;CL:0000055!7.53e-13!180;CL:0000057!9.37e-09!75 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.59e-14;23!CL:0002594;4.73e-08;4!CL:0000222;4.89e-08;1 | |ontology_enrichment_celltype_v019=CL:0002620;2.59e-14;23!CL:0002594;4.73e-08;4!CL:0000222;4.89e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.59e-14,23;CL:0002594,4.74e-08,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3112;9.79e-09;1!DOID:0060085;2.59e-08;1!DOID:3165;2.59e-08;1!DOID:0060121;2.59e-08;1!DOID:2438;2.59e-08;1!DOID:4418;2.59e-08;1!DOID:2513;2.59e-08;1!DOID:4235;4.89e-08;1!DOID:3571;4.89e-08;1 | |ontology_enrichment_disease_v019=DOID:3112;9.79e-09;1!DOID:0060085;2.59e-08;1!DOID:3165;2.59e-08;1!DOID:0060121;2.59e-08;1!DOID:2438;2.59e-08;1!DOID:4418;2.59e-08;1!DOID:2513;2.59e-08;1!DOID:4235;4.89e-08;1!DOID:3571;4.89e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3112,9.79e-09,1;DOID:0060085,2.17e-08,1;DOID:3165,2.17e-08,1;DOID:0060121,2.17e-08,1;DOID:2438,2.17e-08,1;DOID:4418,2.17e-08,1;DOID:2513,2.69e-08,1;DOID:3571,3.57e-08,1;DOID:4235,4.41e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002097!3.57e-15!40;UBERON:0002199!5.46e-13!45;UBERON:0002416!5.46e-13!45 | |ontology_enrichment_uberon=UBERON:0002097!3.57e-15!40;UBERON:0002199!5.46e-13!45;UBERON:0002416!5.46e-13!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.58e-10;41!UBERON:0002371;2.30e-09;12!UBERON:0007195;1.69e-08;1!UBERON:0002199;3.83e-08;46!UBERON:0002416;3.83e-08;46!UBERON:0001310;4.73e-08;4!UBERON:0000014;6.70e-08;4!UBERON:0003102;7.77e-07;50 | |ontology_enrichment_uberon_v019=UBERON:0002097;3.58e-10;41!UBERON:0002371;2.30e-09;12!UBERON:0007195;1.69e-08;1!UBERON:0002199;3.83e-08;46!UBERON:0002416;3.83e-08;46!UBERON:0001310;4.73e-08;4!UBERON:0000014;6.70e-08;4!UBERON:0003102;7.77e-07;50 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.54e-12,41;UBERON:0002199,5.07e-11,46;UBERON:0002416,5.07e-11,46;UBERON:0007195,1.63e-08,1;UBERON:0001310,4.74e-08,4;UBERON:0000014,6.26e-08,4 | |||
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| ||
|short_description=p@chr8:69901760..69901778,+ | |short_description=p@chr8:69901760..69901778,+ | ||
}} | }} |
Latest revision as of 19:40, 31 July 2015
Short description: | p@chr8:69901760..69901778, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:69901760..69901778, + |
Coexpression cluster: | C1287_mesenchymal_Fibroblast_mesodermal_papillary_Smooth_hepatic_basal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.59e-14 | 23 |
smooth muscle cell of the umbilical artery | 4.74e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.54e-12 | 41 |
integument | 5.07e-11 | 46 |
integumental system | 5.07e-11 | 46 |
stroma of bone marrow | 1.63e-08 | 1 |
umbilical artery | 4.74e-08 | 4 |
zone of skin | 6.26e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 9.79e-09 | 1 |
organ system benign neoplasm | 2.17e-08 | 1 |
skin benign neoplasm | 2.17e-08 | 1 |
integumentary system benign neoplasm | 2.17e-08 | 1 |
dermis tumor | 2.17e-08 | 1 |
cutaneous fibrous histiocytoma | 2.17e-08 | 1 |
basal cell carcinoma | 2.69e-08 | 1 |
liver cancer | 3.57e-08 | 1 |
spindle cell sarcoma | 4.41e-08 | 1 |