FFCP PHASE1:Hg19::chr15:58358326..58358357,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8854 | |EntrezGene=8854 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15472 | |HGNC=15472 | ||
|TSSclassifier=strong | |||
|UniProt=B4DZR2,F5H2Y9,O94788 | |UniProt=B4DZR2,F5H2Y9,O94788 | ||
|association_with_transcript=-205bp_to_NM_001206897,NM_003888,NM_170696_5end | |association_with_transcript=-205bp_to_NM_001206897,NM_003888,NM_170696_5end | ||
|cluster_id=chr15:58358326..58358357,- | |||
|description=CAGE_peak_3_at_ALDH1A2_5end | |description=CAGE_peak_3_at_ALDH1A2_5end | ||
|id=chr15:58358326..58358357,- | |id=chr15:58358326..58358357,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000077,9.65e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.05e-11;2 | |ontology_enrichment_development_v019=UBERON:0007297;2.05e-11;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.02e-20!115;UBERON:0003103!4.22e-10!69;UBERON:0000489!1.63e-07!32 | |ontology_enrichment_uberon=UBERON:0007023!2.02e-20!115;UBERON:0003103!4.22e-10!69;UBERON:0000489!1.63e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;4.52e-16;3!UBERON:0004054;4.52e-16;3!UBERON:0005904;3.47e-12;4!UBERON:0002133;5.58e-12;2!UBERON:0003135;1.99e-11;11!UBERON:0003978;2.91e-08;3!UBERON:0000946;2.91e-08;3!UBERON:0003101;6.53e-08;22!UBERON:0000079;6.53e-08;22!UBERON:0000478;3.11e-07;24!UBERON:0006834;5.72e-07;1!UBERON:0002135;6.40e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0006947;4.52e-16;3!UBERON:0004054;4.52e-16;3!UBERON:0005904;3.47e-12;4!UBERON:0002133;5.58e-12;2!UBERON:0003135;1.99e-11;11!UBERON:0003978;2.91e-08;3!UBERON:0000946;2.91e-08;3!UBERON:0003101;6.53e-08;22!UBERON:0000079;6.53e-08;22!UBERON:0000478;3.11e-07;24!UBERON:0006834;5.72e-07;1!UBERON:0002135;6.40e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.97e-16,3;UBERON:0004054,1.97e-16,3;UBERON:0005904,1.88e-12,4;UBERON:0002133,4.89e-12,2;UBERON:0003135,1.59e-11,11;UBERON:0003978,2.67e-08,3;UBERON:0009751,2.67e-08,3;UBERON:0000946,2.67e-08,3;UBERON:0002523,2.67e-08,3;UBERON:0005983,2.67e-08,3;UBERON:0002165,2.67e-08,3;UBERON:0002062,2.67e-08,3;UBERON:0007280,2.67e-08,3;UBERON:0003101,5.75e-08,22;UBERON:0000079,5.75e-08,22;UBERON:0000478,3.34e-07,24;UBERON:0003887,5.25e-07,12;UBERON:0006834,5.58e-07,1;UBERON:0002135,6.23e-07,1;UBERON:0002134,9.15e-07,1;UBERON:0005208,9.15e-07,1;UBERON:0005946,9.15e-07,1;UBERON:0005965,9.15e-07,1;UBERON:0002078,9.15e-07,1 | |||
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| ||
|short_description=p3@ALDH1A2 | |short_description=p3@ALDH1A2 | ||
}} | }} |
Latest revision as of 06:45, 18 September 2015
Short description: | p3@ALDH1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ALDH1A2_5end |
Coexpression cluster: | NA |
Association with transcript: | -205bp_to_NM_001206897, NM_003888, NM_170696_5end |
EntrezGene: | ALDH1A2 |
HGNC: | 15472 |
UniProt: | B4DZR2F5H2Y9O94788 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 9.65e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.97e-16 | 3 |
internal male genitalia | 1.97e-16 | 3 |
duct of male reproductive system | 1.88e-12 | 4 |
atrioventricular valve | 4.89e-12 | 2 |
male reproductive organ | 1.59e-11 | 11 |
valve | 2.67e-08 | 3 |
cardiac mesenchyme | 2.67e-08 | 3 |
cardial valve | 2.67e-08 | 3 |
tunica intima | 2.67e-08 | 3 |
heart layer | 2.67e-08 | 3 |
endocardium | 2.67e-08 | 3 |
endocardial cushion | 2.67e-08 | 3 |
presumptive endocardium | 2.67e-08 | 3 |
male organism | 5.75e-08 | 22 |
male reproductive system | 5.75e-08 | 22 |
extraembryonic structure | 3.34e-07 | 24 |
intraembryonic coelom | 5.25e-07 | 12 |
uterus or analog | 5.58e-07 | 1 |
mitral valve | 6.23e-07 | 1 |
tricuspid valve | 9.15e-07 | 1 |
right atrium valve | 9.15e-07 | 1 |
outflow tract of atrium | 9.15e-07 | 1 |
outflow part of right atrium | 9.15e-07 | 1 |
right cardiac atrium | 9.15e-07 | 1 |