FFCP PHASE1:Hg19::chr1:185126257..185126279,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54823 | |EntrezGene=54823 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16785 | |HGNC=16785 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T5J6 | |UniProt=Q5T5J6 | ||
|association_with_transcript=-11bp_to_ENST00000367500,NM_017673,uc001grh.3_5end | |association_with_transcript=-11bp_to_ENST00000367500,NM_017673,uc001grh.3_5end | ||
|cluster_id=chr1:185126257..185126279,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_5_at_SWT1_5end | |description=CAGE_peak_5_at_SWT1_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002581;1.10e-09;1!CL:0000860;5.44e-09;33!CL:0002057;5.44e-09;33!CL:0000473;3.54e-07;39!CL:0000234;3.54e-07;39 | |ontology_enrichment_celltype_v019=CL:0002581;1.10e-09;1!CL:0000860;5.44e-09;33!CL:0002057;5.44e-09;33!CL:0000473;3.54e-07;39!CL:0000234;3.54e-07;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002581,8.17e-10,1;CL:0000860,9.81e-07,42;CL:0002057,9.81e-07,42 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3151;1.10e-09;1!DOID:3149;1.10e-09;1 | |ontology_enrichment_disease_v019=DOID:3151;1.10e-09;1!DOID:3149;1.10e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,2.67e-09,1;DOID:3149,2.67e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.65e-08!115 | |ontology_enrichment_uberon=UBERON:0007023!3.65e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.10e-09;1 | |ontology_enrichment_uberon_v019=UBERON:0007195;1.10e-09;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,2.26e-09,1 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0.204000691244253,0,0.286235987131057,0,0,0,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.217010870715852,0,0,0.257575567634187,0.290796477559129,0,0.242584061187816,0.464858073811369,0.822335776043652,1.54853185447552,0,1.2808035326455,1.18241114944293,0.689491361473237,1.93645405075148,1.35426486594342,0.188242339542605,0.272906150057846,0.449446968890169,0.612167784741805,0.962787081228281,0,0.659702600373432,0.199463657621632,0.426224750532694,0,0.56738522469114,0,0.502497330513487,0.521482918420201,1.52032191293582,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0,0.390178042679635,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0,0,0,0.472674085820339,0,0.087834785693126,1.96468613246569,0,0,0,0,0,0,0,0.371457501329565,0.198762407366705,0.860234595106124,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0.760272105718513,0,0,0,0.535798369704479,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0,0.560677600142307,0,0,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0,0.624320153660641,0.570471821544449,0,0.352303495931295,0.161872944368132,0.280901613404497,0.408308342509787,0.122834317311768,0.103325781175765,0,0,0,0,0.336672227908132,0.375355559615893,0.554128230968366,0,0,0,0,0.358779271377724,0,0.423863802319124,0,0.206105058476878,0.515281080091258,0.18611685633159,0,0.292311015483596,0.504867548488229,0,0,0.355009592516614,0.10075209822764,0.339121184620975,0.193260853163297,0,0,0.365921118388786,0,0.69716365721711,0.207322110030741,0,0,0,0,0,0,0,0.591534000199219,0,0.723033089650446,0,0,0,0.134831308160164,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0.93733833986777,0.335964256397719,0.141775097242386,0.179117045405697,0,0,0.985326475791887,0.528290604079356,0.207328115540772,0.288239906833923,0.50496973370552,0.190493682876507,0,0,0,0.308482478109971,0,0.857479297891735,0.112131084345361,0,0.2933531432838,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0.112085143993527,0,0,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0.749007023947182,0,0.828831026872071,0.24538298343828,0,0,0.415941723061614,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0,0.215714200818617,0,0,0,0.30239029332968,0.248107807818777,0,0,0.384417447767103,0,0,1.48418066444991,0.154209693802656,0,0.328508624055237,0.519254429183621,0,0.120859449591622,0,0.276242966807689,0.229628896329213,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0.522870902049801,0,0,0,0.412164046590889,0.366277859273374,0,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0,0.137836572484531,0.214840489736547,0,0.170453254832202,0.0890320356467374,0,0.192190067365106,0.255225424989168,0.10115778085555,1.39453664789186,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.409499734223957,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,0,0.329294892959902,0.379473173765715,0,0,0,0,0.564862804660675,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0.79312517629427,0.320472213382419,0,0.490080431962063,0.185803175125719,0,0,0.159426272728822,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0.278406173895242,1.23087398947712,0.270455678475983,0,0,0.18714054040822,0.293016358543788,0.485442086998054,0.111443384277478,0.284136146806413,0.47748896947538,0,0.307160702099232,0,0,0.111308705022906,0.16480387422676,0,0.19924798825107,0,0,0,0.123084805461069,0,0.179736702294654,0.179021174675609,0,0.197286811273867,0,1.11136990144637,0,0.371072392647405,0,0.520855522170466,0.174919999992391,0,0,0,0.472775363535873,0,0.291604613383254,0.347249989866585,0,0.241192877250816,0,0.552896299656123,0.886642856860642,0.219385397153973,0.10893846351899,0.278847488557207,0.461701551022782,0,0.23056390438806,0.269272933229316,0.325942115766024,0,0.274792780205587,0,0,0,0.166211681900156,0.451191321234361,0.19606253431774,0.167821586975843,0.189753732724185,0.158936578980379,0,0,0,0.216388639742091,0,0.353830258013357,1.22206028986725,0,0,0.104421949505455,0.337005664903385,0,0.234264445725339,0,0.19566461893209,0.485560759068186,0,0,0.30607276163049,0.379119477770928,0,0,0.664653872707185,0,0,0,0.569219092059585,0.138674673013139,0,0.0979923974143777,0.174118413160805,0.34945333648406,0.343972064943233,0.483781656445426,0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| ||
|short_description=p5@SWT1 | |short_description=p5@SWT1 | ||
}} | }} |
Latest revision as of 06:07, 19 September 2015
Short description: | p5@SWT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SWT1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -11bp_to_ENST00000367500, NM_017673, uc001grh.3_5end |
EntrezGene: | SWT1 |
HGNC: | 16785 |
UniProt: | Q5T5J6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 8.17e-10 | 1 |
classical monocyte | 9.81e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.81e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 2.26e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.67e-09 | 1 |
keratoacanthoma | 2.67e-09 | 1 |