FFCP PHASE1:Hg19::chr4:74279203..74279204,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=213 | |EntrezGene=213 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=399 | |HGNC=399 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-86bp_to_ENST00000504043_5end | |association_with_transcript=-86bp_to_ENST00000504043_5end | ||
|cluster_id=chr4:74279203..74279204,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_48_at_ALB_5end | |description=CAGE_peak_48_at_ALB_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!4.60e-41!12;CL:0000417!4.60e-41!12;CL:0000668!4.60e-41!12;CL:0000414!4.60e-41!12;CL:0000412!4.60e-41!12;CL:0000182!4.60e-41!12;CL:0000223!5.75e-12!59 | |ontology_enrichment_celltype=CL:0000181!4.60e-41!12;CL:0000417!4.60e-41!12;CL:0000668!4.60e-41!12;CL:0000414!4.60e-41!12;CL:0000412!4.60e-41!12;CL:0000182!4.60e-41!12;CL:0000223!5.75e-12!59 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.88e-15;11!UBERON:0009497;3.03e-13;13 | |ontology_enrichment_development_v019=UBERON:0004161;1.88e-15;11!UBERON:0009497;3.03e-13;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.15e-50!19;UBERON:0006925!1.15e-50!19;UBERON:0008836!1.15e-50!19;UBERON:0008835!9.11e-44!22;UBERON:0003894!9.11e-44!22;UBERON:0009854!7.25e-42!23;UBERON:0007499!1.61e-38!25;UBERON:0009497!1.61e-38!25;UBERON:0000015!1.61e-38!25;UBERON:0002423!1.61e-38!25;UBERON:0006235!1.61e-38!25;UBERON:0004161!1.61e-38!25;UBERON:0005057!4.86e-37!26;UBERON:0009856!4.86e-37!26;UBERON:0002365!4.59e-31!31;UBERON:0002330!4.59e-31!31;UBERON:0002368!1.64e-27!35;UBERON:0003929!4.20e-23!54;UBERON:0000949!2.22e-21!45;UBERON:0005172!1.81e-17!55;UBERON:0005173!1.81e-17!55;UBERON:0002530!2.83e-16!59;UBERON:0002417!9.81e-16!61;UBERON:0000916!9.81e-16!61;UBERON:0005911!3.99e-15!82;UBERON:0001041!1.05e-09!98;UBERON:0004921!2.10e-09!129;UBERON:0004185!2.10e-09!129;UBERON:0005177!7.29e-09!107;UBERON:0000490!7.83e-09!138;UBERON:0009569!2.24e-08!113;UBERON:0002405!3.76e-08!115;UBERON:0003914!5.24e-08!118;UBERON:0001007!9.26e-08!155;UBERON:0001555!9.26e-08!155;UBERON:0007026!9.26e-08!155;UBERON:0000466!1.78e-07!126;UBERON:0000077!3.09e-07!130;UBERON:0004119!4.43e-07!169;UBERON:0000925!4.43e-07!169;UBERON:0006595!4.43e-07!169 | |ontology_enrichment_uberon=UBERON:0002107!1.15e-50!19;UBERON:0006925!1.15e-50!19;UBERON:0008836!1.15e-50!19;UBERON:0008835!9.11e-44!22;UBERON:0003894!9.11e-44!22;UBERON:0009854!7.25e-42!23;UBERON:0007499!1.61e-38!25;UBERON:0009497!1.61e-38!25;UBERON:0000015!1.61e-38!25;UBERON:0002423!1.61e-38!25;UBERON:0006235!1.61e-38!25;UBERON:0004161!1.61e-38!25;UBERON:0005057!4.86e-37!26;UBERON:0009856!4.86e-37!26;UBERON:0002365!4.59e-31!31;UBERON:0002330!4.59e-31!31;UBERON:0002368!1.64e-27!35;UBERON:0003929!4.20e-23!54;UBERON:0000949!2.22e-21!45;UBERON:0005172!1.81e-17!55;UBERON:0005173!1.81e-17!55;UBERON:0002530!2.83e-16!59;UBERON:0002417!9.81e-16!61;UBERON:0000916!9.81e-16!61;UBERON:0005911!3.99e-15!82;UBERON:0001041!1.05e-09!98;UBERON:0004921!2.10e-09!129;UBERON:0004185!2.10e-09!129;UBERON:0005177!7.29e-09!107;UBERON:0000490!7.83e-09!138;UBERON:0009569!2.24e-08!113;UBERON:0002405!3.76e-08!115;UBERON:0003914!5.24e-08!118;UBERON:0001007!9.26e-08!155;UBERON:0001555!9.26e-08!155;UBERON:0007026!9.26e-08!155;UBERON:0000466!1.78e-07!126;UBERON:0000077!3.09e-07!130;UBERON:0004119!4.43e-07!169;UBERON:0000925!4.43e-07!169;UBERON:0006595!4.43e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.39e-19;19!UBERON:0006925;1.39e-19;19!UBERON:0002423;4.19e-15;25!UBERON:0002365;4.33e-12;31!UBERON:0002330;4.33e-12;31!UBERON:0002368;3.75e-10;33!UBERON:0000949;1.86e-07;43 | |ontology_enrichment_uberon_v019=UBERON:0002107;1.39e-19;19!UBERON:0006925;1.39e-19;19!UBERON:0002423;4.19e-15;25!UBERON:0002365;4.33e-12;31!UBERON:0002330;4.33e-12;31!UBERON:0002368;3.75e-10;33!UBERON:0000949;1.86e-07;43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.31e-19,19;UBERON:0006925,1.31e-19,19;UBERON:0008836,1.31e-19,19;UBERON:0008835,4.60e-17,22;UBERON:0003894,4.60e-17,22;UBERON:0009854,2.31e-16,23;UBERON:0007499,3.99e-15,25;UBERON:0009497,3.99e-15,25;UBERON:0000015,3.99e-15,25;UBERON:0002423,3.99e-15,25;UBERON:0006235,3.99e-15,25;UBERON:0004161,3.99e-15,25;UBERON:0009856,1.41e-14,26;UBERON:0002365,2.30e-12,31;UBERON:0002330,2.30e-12,31;UBERON:0002368,4.78e-11,35;UBERON:0000949,9.12e-09,45;UBERON:0003929,1.99e-07,54;UBERON:0005172,1.99e-07,54;UBERON:0005173,1.99e-07,54;UBERON:0002530,7.38e-07,59;UBERON:0002417,9.34e-07,60;UBERON:0000916,9.34e-07,60 | |||
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|short_description=p48@ALB | |short_description=p48@ALB | ||
}} | }} |
Latest revision as of 12:56, 18 September 2015
Short description: | p48@ALB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_48_at_ALB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -86bp_to_ENST00000504043_5end |
EntrezGene: | ALB |
HGNC: | 399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 1.31e-19 | 19 |
digestive gland | 1.31e-19 | 19 |
liver bud | 1.31e-19 | 19 |
hepatic diverticulum | 4.60e-17 | 22 |
liver primordium | 4.60e-17 | 22 |
digestive tract diverticulum | 2.31e-16 | 23 |
epithelial sac | 3.99e-15 | 25 |
epithelium of foregut-midgut junction | 3.99e-15 | 25 |
anatomical boundary | 3.99e-15 | 25 |
hepatobiliary system | 3.99e-15 | 25 |
foregut-midgut junction | 3.99e-15 | 25 |
septum transversum | 3.99e-15 | 25 |
sac | 1.41e-14 | 26 |
exocrine gland | 2.30e-12 | 31 |
exocrine system | 2.30e-12 | 31 |
endocrine gland | 4.78e-11 | 35 |
endocrine system | 9.12e-09 | 45 |
gut epithelium | 1.99e-07 | 54 |
abdomen element | 1.99e-07 | 54 |
abdominal segment element | 1.99e-07 | 54 |
gland | 7.38e-07 | 59 |
abdominal segment of trunk | 9.34e-07 | 60 |
abdomen | 9.34e-07 | 60 |