FFCP PHASE1:Hg19::chr21:40823840..40823876,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:40823840..40823876,+
|short_description=p3@SH3BGR
|description=CAGE_peak_3_at_SH3BGR_5end
|association_with_transcript=-172bp_to_ENST00000452550_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6450 | |EntrezGene=6450 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10822 | |HGNC=10822 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-172bp_to_ENST00000452550_5end | |||
|cluster_id=chr21:40823840..40823876,+ | |||
|description=CAGE_peak_3_at_SH3BGR_5end | |||
|id=chr21:40823840..40823876,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.98e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,9.61e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.84e-38!115;UBERON:0001049!4.88e-18!57;UBERON:0005068!4.88e-18!57;UBERON:0006241!4.88e-18!57;UBERON:0007135!4.88e-18!57;UBERON:0003075!8.79e-16!86;UBERON:0007284!8.79e-16!86;UBERON:0002346!8.28e-15!90;UBERON:0002616!2.22e-14!59;UBERON:0003080!6.10e-14!42;UBERON:0005743!6.41e-14!86;UBERON:0001017!1.03e-13!82;UBERON:0002780!1.43e-13!41;UBERON:0001890!1.43e-13!41;UBERON:0006240!1.43e-13!41;UBERON:0000073!2.78e-13!94;UBERON:0001016!2.78e-13!94;UBERON:0000955!8.81e-13!69;UBERON:0006238!8.81e-13!69;UBERON:0000025!2.50e-12!194;UBERON:0000475!4.48e-12!365;UBERON:0004111!7.90e-12!241;UBERON:0007100!1.12e-11!27;UBERON:0000468!9.83e-11!659;UBERON:0000481!1.75e-10!347;UBERON:0001893!9.49e-10!34;UBERON:0003056!1.13e-09!61;UBERON:0002791!2.19e-09!33;UBERON:0000153!2.29e-09!129;UBERON:0007811!2.29e-09!129;UBERON:0000033!2.37e-09!123;UBERON:0000948!2.58e-09!24;UBERON:0005498!2.58e-09!24;UBERON:0004140!2.58e-09!24;UBERON:0009881!2.58e-09!24;UBERON:0004141!2.58e-09!24;UBERON:0003084!2.58e-09!24;UBERON:0007005!2.58e-09!24;UBERON:0004139!2.58e-09!24;UBERON:0004291!2.58e-09!24;UBERON:0002020!7.21e-09!34;UBERON:0003528!7.21e-09!34;UBERON:0000483!7.58e-09!309;UBERON:0000477!9.19e-09!286;UBERON:0001869!9.21e-09!32;UBERON:0004121!9.39e-09!169;UBERON:0000119!1.86e-08!312;UBERON:0000922!2.01e-08!612;UBERON:0000924!2.14e-08!173;UBERON:0006601!2.14e-08!173;UBERON:0003103!1.29e-07!69;UBERON:0000467!3.52e-07!625;UBERON:0000480!4.43e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;6.32e-14;25!UBERON:0000948;2.38e-10;22!UBERON:0003688;1.99e-08;6!UBERON:0002358;1.99e-08;6!UBERON:0003684;1.99e-08;6!UBERON:0001178;1.99e-08;6!UBERON:0007023;1.86e-07;114!UBERON:0004457;6.67e-07;9!UBERON:0000042;6.67e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.41e-28,114;UBERON:0007100,5.28e-14,27;UBERON:0000948,1.68e-10,24;UBERON:0005498,1.68e-10,24;UBERON:0004140,1.68e-10,24;UBERON:0009881,1.68e-10,24;UBERON:0004141,1.68e-10,24;UBERON:0003084,1.68e-10,24;UBERON:0007005,1.68e-10,24;UBERON:0004139,1.68e-10,24;UBERON:0004291,1.68e-10,24;UBERON:0003103,8.59e-09,68;UBERON:0003688,2.94e-08,6;UBERON:0002358,2.94e-08,6;UBERON:0003684,2.94e-08,6;UBERON:0001178,2.94e-08,6;UBERON:0010314,3.11e-08,132;UBERON:0004797,9.15e-08,7;UBERON:0004111,2.60e-07,240 | |||
|phase1_expression=1.2717486548939,1.07050261945492,6.06103937612676,1.0007329835313,4.02264984984559,1.74467704820074,0,1.26343974685366,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.626909442956176,0.572471974262113,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81297636055767,0,0.50133791063589,0,0,0.486634870302636,0.283604451492204,0.221729397462564,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,4.96971951695318,7.21793916488105,0.926864265692532,5.44989579422746,3.54668382198357,0.560677600142307,3.20246987189115,5.67335361359468,0,2.02066008104532,0,0.151357427644931,0,0.468642863667593,0.312160076830321,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.907457465280168,0,0.213557388818567,0,0,0,0,0.37223371266318,0,0,0.252433774244115,0.184099797284599,0.969876340912871,0,0.201504196455281,0.169560592310488,0,0,0,2.07355300420312,1.59035721985782,2.09149097165133,2.798848485415,3.02785021050754,0.72995471815166,0,0,0,0,1.44375896333917,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.579125226670317,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0.343143423810856,0,0,0,0,0,0,2.72918588600655,0.61384789315225,1.96462066103151,9.22601874641047,1.53512174720011,3.37793234401576,0,0.154209693802656,0.355123450626254,0,0,0,0,0,6.07734526976916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.55529752530024,1.95777922130672,0,0,0,0,0,13.5339005608971,0.308097234229289,0,0.137836572484531,0.214840489736547,0.145016693914229,0.426133137080504,10.5948122419617,0.826424576804891,0.384380134730212,0.127612712494584,2.4277867405332,0,0.94443704049192,0,0.924100740528266,1.59691809095107,0,3.7064843820784,10.7343665056493,0,0,0,0,0.42793898803392,0,0.78494864019923,0,0,0.117812402345686,0.606547444719948,1.58510321173008,0,0,0.731140468893853,1.05650146756755,0,0.141405431953713,1.13008116620243,0,1.32687795048244,3.94605796728386,0,0,3.44947640836597,0.92947049429925,0.563391205064483,0.143411352204052,0,2.49669736036875,0,0,1.31717957183961,0,0,0,0,0,1.60044461320525,0,0,0,0,0,0,0,0,0,0,0,0,2.45695363593188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,2.05111450980652,0,2.45175445410452,0,0,0,0,0,1.26602474769461,0,0,0,26.1014864608901,1.10513566212459,0,1.02268682502155,0,0.311039587661807,0,0,0,10.2589141862411,0,0,0,1.20598527610407,0,1.04171104434093,0,0.724999575434793,0,0,0,0.689486746482929,0,0,0.885741385813839,1.68835014075571,0,0.552896299656123,0.886642856860642,1.09692698576986,0.10893846351899,0,1.84680620409113,0,0,0,0,0,0,0,0,0,0,1.1279783030859,1.37243774022418,1.34257269580674,0.189753732724185,0,0,0,0,0,4.97630965539252,2.29989667708682,3.05515072466813,0,0,0,1.21322039365219,21.6695964770673,0.937057782901357,0,0,0,1.57833761139756,3.62972148145992,0,3.41207529993835,0.60129367765797,0.72581733978073,0,0,0,0,0,21.0785502979971,0,0,0,4.36816670605075,0.171986032471617,0,0,0,5.52837393983991,0,6.10148000107438,0,0,0.696418755514666,0,0,8.32466679483475,0.19980960958213,0,0.229073192331831,0,0,0,0,0,0.104602846312333,3.2639429643623,0,0.600420288709789,3.69644523008381,0,0,0,9.7748840445289,22.2285611291333,1.43574604915363,11.7810610294405,17.5982679735994,23.6561744888385,57.173135086204,0.360299883542404,1.16495949527454,0,0,0,0,0,1.59045937961861,3.13267834056624,1.76828463311521,1.65047323916681,0,0,0,0.425246896606173,0,0.630445658393585,0.209818352539992,0,0,0,7.86164859010704,25.8215868442518,0,0,0,0,0,0,0,0,0,0,0,1.19009341568421,0,0,0.640724475406168,0.471612915298998,0.828478110694391,0,0,0,0.638341257770182,0.544017803369474,2.2562090462043,0.612691153526923,1.31149052283922,0,0.886068179966986,0.488105059607853,1.752673029891,3.44045517414043,3.88251680378983,2.11127770000704,0,0,0,0,0,0.936669811613763,0.144921028610825,0.298509605773748,2.33713309847224,0,0.378806010550178,0.50313580350515,0,38.4451314906832,3.4783112465545,1.39893480524502,0.591420599958536,0,0,0.155262956876259,0,0.53168342911599,1.5652351854352,0,0,0.813741466409323,0,0,0,0,0,0,0.336749488765919,10.0947918582921,0,0,1.04397716786085,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,40.6236212569552,0,0,0,0,0,0,0,1.11903606175556,0,0.639471856518258,0,0,0,0,0,0.247871528518004,0,3.4980478571876,0,0,0.352675943690684,0,0.706521476061055,0,1.59633859057151,0.41023272848151,0,0.345786262321089,0.968853873791107,0,0,0,0,0,0,0,0,1.35378591028663,0.20170506870352,0,0,0,0,0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|phase1_expression=1.2717486548939,1.07050261945492,6.06103937612676,1.0007329835313,4.02264984984559,1.74467704820074,0,1.26343974685366,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.626909442956176,0.572471974262113,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81297636055767,0,0.50133791063589,0,0,0.486634870302636,0.283604451492204,0.221729397462564,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,4.96971951695318,7.21793916488105,0.926864265692532,5.44989579422746,3.54668382198357,0.560677600142307,3.20246987189115,5.67335361359468,0,2.02066008104532,0,0.151357427644931,0,0.468642863667593,0.312160076830321,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.907457465280168,0,0.213557388818567,0,0,0,0,0.37223371266318,0,0,0.252433774244115,0.184099797284599,0.969876340912871,0,0.201504196455281,0.169560592310488,0,0,0,2.07355300420312,1.59035721985782,2.09149097165133,2.798848485415,3.02785021050754,0.72995471815166,0,0,0,0,1.44375896333917,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0.325808305310325,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.579125226670317,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0.343143423810856,0,0,0,0,0,0,2.72918588600655,0.61384789315225,1.96462066103151,9.22601874641047,1.53512174720011,3.37793234401576,0,0.154209693802656,0.355123450626254,0,0,0,0,0,6.07734526976916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.55529752530024,1.95777922130672,0,0,0,0,0,13.5339005608971,0.308097234229289,0,0.137836572484531,0.214840489736547,0.145016693914229,0.426133137080504,10.5948122419617,0.826424576804891,0.384380134730212,0.127612712494584,2.4277867405332,0,0.94443704049192,0,0.924100740528266,1.59691809095107,0,3.7064843820784,10.7343665056493,0,0,0,0,0.42793898803392,0,0.78494864019923,0,0,0.117812402345686,0.606547444719948,1.58510321173008,0,0,0.731140468893853,1.05650146756755,0,0.141405431953713,1.13008116620243,0,1.32687795048244,3.94605796728386,0,0,3.44947640836597,0.92947049429925,0.563391205064483,0.143411352204052,0,2.49669736036875,0,0,1.31717957183961,0,0,0,0,0,1.60044461320525,0,0,0,0,0,0,0,0,0,0,0,0,2.45695363593188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,2.05111450980652,0,2.45175445410452,0,0,0,0,0,1.26602474769461,0,0,0,26.1014864608901,1.10513566212459,0,1.02268682502155,0,0.311039587661807,0,0,0,10.2589141862411,0,0,0,1.20598527610407,0,1.04171104434093,0,0.724999575434793,0,0,0,0.689486746482929,0,0,0.885741385813839,1.68835014075571,0,0.552896299656123,0.886642856860642,1.09692698576986,0.10893846351899,0,1.84680620409113,0,0,0,0,0,0,0,0,0,0,1.1279783030859,1.37243774022418,1.34257269580674,0.189753732724185,0,0,0,0,0,4.97630965539252,2.29989667708682,3.05515072466813,0,0,0,1.21322039365219,21.6695964770673,0.937057782901357,0,0,0,1.57833761139756,3.62972148145992,0,3.41207529993835,0.60129367765797,0.72581733978073,0,0,0,0,0,21.0785502979971,0,0,0,4.36816670605075,0.171986032471617,0,0,0,5.52837393983991,0,6.10148000107438,0,0,0.696418755514666,0,0,8.32466679483475,0.19980960958213,0,0.229073192331831,0,0,0,0,0,0.104602846312333,3.2639429643623,0,0.600420288709789,3.69644523008381,0,0,0,9.7748840445289,22.2285611291333,1.43574604915363,11.7810610294405,17.5982679735994,23.6561744888385,57.173135086204,0.360299883542404,1.16495949527454,0,0,0,0,0,1.59045937961861,3.13267834056624,1.76828463311521,1.65047323916681,0,0,0,0.425246896606173,0,0.630445658393585,0.209818352539992,0,0,0,7.86164859010704,25.8215868442518,0,0,0,0,0,0,0,0,0,0,0,1.19009341568421,0,0,0.640724475406168,0.471612915298998,0.828478110694391,0,0,0,0.638341257770182,0.544017803369474,2.2562090462043,0.612691153526923,1.31149052283922,0,0.886068179966986,0.488105059607853,1.752673029891,3.44045517414043,3.88251680378983,2.11127770000704,0,0,0,0,0,0.936669811613763,0.144921028610825,0.298509605773748,2.33713309847224,0,0.378806010550178,0.50313580350515,0,38.4451314906832,3.4783112465545,1.39893480524502,0.591420599958536,0,0,0.155262956876259,0,0.53168342911599,1.5652351854352,0,0,0.813741466409323,0,0,0,0,0,0,0.336749488765919,10.0947918582921,0,0,1.04397716786085,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,40.6236212569552,0,0,0,0,0,0,0,1.11903606175556,0,0.639471856518258,0,0,0,0,0,0.247871528518004,0,3.4980478571876,0,0,0.352675943690684,0,0.706521476061055,0,1.59633859057151,0.41023272848151,0,0.345786262321089,0.968853873791107,0,0,0,0,0,0,0,0,1.35378591028663,0.20170506870352,0,0,0,0,0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| ||
|short_description=p3@SH3BGR | |||
}} | }} |
Latest revision as of 11:30, 18 September 2015
Short description: | p3@SH3BGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SH3BGR_5end |
Coexpression cluster: | NA |
Association with transcript: | -172bp_to_ENST00000452550_5end |
EntrezGene: | SH3BGR |
HGNC: | 10822 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 9.61e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.41e-28 | 114 |
primary circulatory organ | 5.28e-14 | 27 |
heart | 1.68e-10 | 24 |
primitive heart tube | 1.68e-10 | 24 |
primary heart field | 1.68e-10 | 24 |
anterior lateral plate mesoderm | 1.68e-10 | 24 |
heart tube | 1.68e-10 | 24 |
heart primordium | 1.68e-10 | 24 |
cardiac mesoderm | 1.68e-10 | 24 |
cardiogenic plate | 1.68e-10 | 24 |
heart rudiment | 1.68e-10 | 24 |
compound organ | 8.59e-09 | 68 |
omentum | 2.94e-08 | 6 |
peritoneum | 2.94e-08 | 6 |
abdominal cavity | 2.94e-08 | 6 |
visceral peritoneum | 2.94e-08 | 6 |
structure with developmental contribution from neural crest | 3.11e-08 | 132 |
blood vessel layer | 9.15e-08 | 7 |
anatomical conduit | 2.60e-07 | 240 |