FFCP PHASE1:Hg19::chr7:45952690..45952701,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3486 | |EntrezGene=3486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5472 | |HGNC=5472 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_S56205_5end | |association_with_transcript=-14bp_to_S56205_5end | ||
|cluster_id=chr7:45952690..45952701,- | |||
|coexpression_cluster_id=C223 | |coexpression_cluster_id=C223 | ||
|description=CAGE_peak_21_at_IGFBP3_5end | |description=CAGE_peak_21_at_IGFBP3_5end | ||
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|ontology_enrichment_celltype=CL:0002620!4.80e-11!23;CL:0000055!1.10e-09!180;CL:0000153!1.50e-09!9;CL:0000447!1.50e-09!9;CL:0000057!1.55e-08!75;CL:0000667!6.14e-08!6;CL:0000058!6.14e-08!6;CL:0000138!6.14e-08!6 | |ontology_enrichment_celltype=CL:0002620!4.80e-11!23;CL:0000055!1.10e-09!180;CL:0000153!1.50e-09!9;CL:0000447!1.50e-09!9;CL:0000057!1.55e-08!75;CL:0000667!6.14e-08!6;CL:0000058!6.14e-08!6;CL:0000138!6.14e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000153;2.76e-29;9!CL:0000447;2.76e-29;9!CL:0000138;3.18e-23;6!CL:0002620;2.86e-17;23!CL:0000327;3.29e-17;15!CL:0000499;2.48e-14;28!CL:0002595;7.57e-10;5!CL:0002541;3.48e-08;3!CL:0000214;4.02e-08;3!CL:0000135;4.39e-08;3!CL:0000388;4.39e-08;3!CL:0000349;8.58e-07;19 | |ontology_enrichment_celltype_v019=CL:0000153;2.76e-29;9!CL:0000447;2.76e-29;9!CL:0000138;3.18e-23;6!CL:0002620;2.86e-17;23!CL:0000327;3.29e-17;15!CL:0000499;2.48e-14;28!CL:0002595;7.57e-10;5!CL:0002541;3.48e-08;3!CL:0000214;4.02e-08;3!CL:0000135;4.39e-08;3!CL:0000388;4.39e-08;3!CL:0000349;8.58e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.51e-29,9;CL:0000447,2.51e-29,9;CL:0000058,3.06e-23,6;CL:0000138,3.06e-23,6;CL:0000327,3.11e-17,15;CL:0002620,3.95e-17,23;CL:0000499,2.20e-14,28;CL:0002595,6.11e-10,5;CL:0002541,2.67e-08,3;CL:0000135,3.68e-08,3;CL:0000388,3.68e-08,3;CL:0000214,3.82e-08,3;CL:0000057,1.19e-07,76;CL:0000349,8.48e-07,19 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!1.55e-08!5;DOID:450!1.55e-08!5;DOID:66!1.55e-08!5;DOID:423!1.55e-08!5;DOID:0080000!1.55e-08!5;DOID:11722!1.55e-08!5 | |ontology_enrichment_disease=DOID:17!1.55e-08!5;DOID:450!1.55e-08!5;DOID:66!1.55e-08!5;DOID:423!1.55e-08!5;DOID:0080000!1.55e-08!5;DOID:11722!1.55e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:17;6.01e-17;5!DOID:450;6.01e-17;5!DOID:66;6.01e-17;5!DOID:423;6.01e-17;5!DOID:0080000;6.01e-17;5!DOID:11722;6.01e-17;5!DOID:2513;5.27e-07;1 | |ontology_enrichment_disease_v019=DOID:17;6.01e-17;5!DOID:450;6.01e-17;5!DOID:66;6.01e-17;5!DOID:423;6.01e-17;5!DOID:0080000;6.01e-17;5!DOID:11722;6.01e-17;5!DOID:2513;5.27e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:17,9.74e-17,5;DOID:450,9.74e-17,5;DOID:66,9.74e-17,5;DOID:423,9.74e-17,5;DOID:0080000,9.74e-17,5;DOID:11722,9.74e-17,5;DOID:2513,5.13e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!7.07e-08!14;UBERON:0000158!7.07e-08!14 | |ontology_enrichment_uberon=UBERON:0005631!7.07e-08!14;UBERON:0000158!7.07e-08!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0003834;7.57e-10;5!UBERON:0001533;7.57e-10;5!UBERON:0005631;9.31e-09;10!UBERON:0000158;9.31e-09;10!UBERON:0002097;2.41e-08;41!UBERON:0003124;3.48e-08;3!UBERON:0000920;3.48e-08;3!UBERON:0006915;4.02e-08;3!UBERON:0007616;4.02e-08;3!UBERON:0002217;4.02e-08;3!UBERON:0002018;4.02e-08;3!UBERON:0007846;4.39e-08;3!UBERON:0000043;4.39e-08;3!UBERON:0007845;4.39e-08;3!UBERON:0002199;3.35e-07;46!UBERON:0002416;3.35e-07;46!UBERON:0003513;3.66e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0003834;7.57e-10;5!UBERON:0001533;7.57e-10;5!UBERON:0005631;9.31e-09;10!UBERON:0000158;9.31e-09;10!UBERON:0002097;2.41e-08;41!UBERON:0003124;3.48e-08;3!UBERON:0000920;3.48e-08;3!UBERON:0006915;4.02e-08;3!UBERON:0007616;4.02e-08;3!UBERON:0002217;4.02e-08;3!UBERON:0002018;4.02e-08;3!UBERON:0007846;4.39e-08;3!UBERON:0000043;4.39e-08;3!UBERON:0007845;4.39e-08;3!UBERON:0002199;3.35e-07;46!UBERON:0002416;3.35e-07;46!UBERON:0003513;3.66e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,3.64e-11,41;UBERON:0003834,6.11e-10,5;UBERON:0001533,6.11e-10,5;UBERON:0002199,9.34e-10,46;UBERON:0002416,9.34e-10,46;UBERON:0000920,2.67e-08,3;UBERON:0007846,3.68e-08,3;UBERON:0000043,3.68e-08,3;UBERON:0007845,3.68e-08,3;UBERON:0006915,3.82e-08,3;UBERON:0007616,3.82e-08,3;UBERON:0002217,3.82e-08,3;UBERON:0002018,3.82e-08,3;UBERON:0003513,3.15e-07,7 | |||
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| ||
|short_description=p21@IGFBP3 | |short_description=p21@IGFBP3 | ||
}} | }} |
Latest revision as of 19:25, 18 September 2015
Short description: | p21@IGFBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_IGFBP3_5end |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | -14bp_to_S56205_5end |
EntrezGene: | IGFBP3 |
HGNC: | 5472 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.51e-29 | 9 |
carbohydrate secreting cell | 2.51e-29 | 9 |
chondroblast | 3.06e-23 | 6 |
chondrocyte | 3.06e-23 | 6 |
extracellular matrix secreting cell | 3.11e-17 | 15 |
skin fibroblast | 3.95e-17 | 23 |
stromal cell | 2.20e-14 | 28 |
smooth muscle cell of the subclavian artery | 6.11e-10 | 5 |
chorionic membrane mesenchymal stem cell | 2.67e-08 | 3 |
fibrocyte | 3.68e-08 | 3 |
tendon cell | 3.68e-08 | 3 |
synovial cell | 3.82e-08 | 3 |
fibroblast | 1.19e-07 | 76 |
extraembryonic cell | 8.48e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
skin of body | 3.64e-11 | 41 |
thoracic segment blood vessel | 6.11e-10 | 5 |
subclavian artery | 6.11e-10 | 5 |
integument | 9.34e-10 | 46 |
integumental system | 9.34e-10 | 46 |
egg chorion | 2.67e-08 | 3 |
dense regular connective tissue | 3.68e-08 | 3 |
tendon | 3.68e-08 | 3 |
regular connective tissue | 3.68e-08 | 3 |
stratified squamous epithelium | 3.82e-08 | 3 |
layer of synovial tissue | 3.82e-08 | 3 |
synovial joint | 3.82e-08 | 3 |
synovial membrane of synovial joint | 3.82e-08 | 3 |
trunk blood vessel | 3.15e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.74e-17 | 5 |
myotonic disease | 9.74e-17 | 5 |
muscle tissue disease | 9.74e-17 | 5 |
myopathy | 9.74e-17 | 5 |
muscular disease | 9.74e-17 | 5 |
myotonic dystrophy | 9.74e-17 | 5 |
basal cell carcinoma | 5.13e-07 | 1 |