FFCP PHASE1:Hg19::chr3:137717669..137717676,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51208 | |EntrezGene=51208 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2039 | |HGNC=2039 | ||
|TSSclassifier=strong | |||
|UniProt=P56856 | |UniProt=P56856 | ||
|association_with_transcript=11bp_to_NM_001002026,uc003ero.1_5end | |association_with_transcript=11bp_to_NM_001002026,uc003ero.1_5end | ||
|cluster_id=chr3:137717669..137717676,+ | |||
|coexpression_cluster_id=C238 | |coexpression_cluster_id=C238 | ||
|description=CAGE_peak_5_at_CLDN18_5end | |description=CAGE_peak_5_at_CLDN18_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!1.01e-10!5;CL:0002535!1.54e-07!2 | |ontology_enrichment_celltype=CL:0002322!1.01e-10!5;CL:0002535!1.54e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002563;2.52e-08;4 | |ontology_enrichment_celltype_v019=CL:0002563;2.52e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.43e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.78e-29;1 | |ontology_enrichment_development_v019=UBERON:0006242;1.78e-29;1 | ||
|ontology_enrichment_disease=DOID:4362!7.14e-11!5;DOID:3493!1.05e-07!2 | |ontology_enrichment_disease=DOID:4362!7.14e-11!5;DOID:3493!1.05e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3493;1.54e-15;2 | |ontology_enrichment_disease_v019=DOID:3493;1.54e-15;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,1.54e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0002336!1.61e-13!1;UBERON:0001018!1.61e-13!1;UBERON:0002473!1.61e-13!1;UBERON:0005340!1.61e-13!1;UBERON:0002316!1.61e-13!1;UBERON:0003544!1.61e-13!1;UBERON:0001020!1.61e-13!1;UBERON:0005970!1.61e-13!1;UBERON:0002437!1.61e-13!1;UBERON:0002372!2.07e-13!1;UBERON:0001961!2.07e-13!1;UBERON:0001744!2.07e-13!1;UBERON:0001735!2.07e-13!1;UBERON:0000002!3.28e-09!6;UBERON:0001560!3.28e-09!6;UBERON:0006955!1.54e-07!2;UBERON:0004801!1.54e-07!2;UBERON:0005162!2.12e-07!2;UBERON:0000122!2.12e-07!2 | |ontology_enrichment_uberon=UBERON:0002336!1.61e-13!1;UBERON:0001018!1.61e-13!1;UBERON:0002473!1.61e-13!1;UBERON:0005340!1.61e-13!1;UBERON:0002316!1.61e-13!1;UBERON:0003544!1.61e-13!1;UBERON:0001020!1.61e-13!1;UBERON:0005970!1.61e-13!1;UBERON:0002437!1.61e-13!1;UBERON:0002372!2.07e-13!1;UBERON:0001961!2.07e-13!1;UBERON:0001744!2.07e-13!1;UBERON:0001735!2.07e-13!1;UBERON:0000002!3.28e-09!6;UBERON:0001560!3.28e-09!6;UBERON:0006955!1.54e-07!2;UBERON:0004801!1.54e-07!2;UBERON:0005162!2.12e-07!2;UBERON:0000122!2.12e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;8.56e-12;22!UBERON:0002110;8.99e-11;3!UBERON:0002114;9.90e-11;2!UBERON:0001242;2.52e-08;4!UBERON:0001262;2.52e-08;4!UBERON:0004786;2.52e-08;4!UBERON:0004808;2.52e-08;4!UBERON:0001277;2.52e-08;4!UBERON:0000160;3.19e-07;17!UBERON:0000945;4.79e-07;5!UBERON:0010039;4.79e-07;5!UBERON:0004921;5.96e-07;33!UBERON:0002108;6.04e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0005409;8.56e-12;22!UBERON:0002110;8.99e-11;3!UBERON:0002114;9.90e-11;2!UBERON:0001242;2.52e-08;4!UBERON:0001262;2.52e-08;4!UBERON:0004786;2.52e-08;4!UBERON:0004808;2.52e-08;4!UBERON:0001277;2.52e-08;4!UBERON:0000160;3.19e-07;17!UBERON:0000945;4.79e-07;5!UBERON:0010039;4.79e-07;5!UBERON:0004921;5.96e-07;33!UBERON:0002108;6.04e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,8.99e-11,3;UBERON:0006242,8.99e-11,3;UBERON:0002114,9.90e-11,2;UBERON:0005409,1.60e-10,25;UBERON:0001242,2.43e-08,4;UBERON:0001262,2.43e-08,4;UBERON:0004786,2.43e-08,4;UBERON:0004808,2.43e-08,4;UBERON:0001277,2.43e-08,4;UBERON:0000160,3.14e-07,17;UBERON:0002108,6.04e-07,4 | |||
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|short_description=p5@CLDN18 | |short_description=p5@CLDN18 | ||
}} | }} |
Latest revision as of 00:25, 25 September 2015
Short description: | p5@CLDN18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CLDN18_5end |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | 11bp_to_NM_001002026, uc003ero.1_5end |
EntrezGene: | CLDN18 |
HGNC: | 2039 |
UniProt: | P56856 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 8.99e-11 | 3 |
gall bladder primordium | 8.99e-11 | 3 |
duodenum | 9.90e-11 | 2 |
gastrointestinal system | 1.60e-10 | 25 |
intestinal mucosa | 2.43e-08 | 4 |
wall of intestine | 2.43e-08 | 4 |
gastrointestinal system mucosa | 2.43e-08 | 4 |
gastrointestinal system epithelium | 2.43e-08 | 4 |
intestinal epithelium | 2.43e-08 | 4 |
intestine | 3.14e-07 | 17 |
small intestine | 6.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.54e-15 | 2 |