FFCP PHASE1:Hg19::chr17:42426327..42426341,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2896 | |EntrezGene=2896 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4601 | |HGNC=4601 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-184bp_to_uc002igq.1_5end | |association_with_transcript=-184bp_to_uc002igq.1_5end | ||
|cluster_id=chr17:42426327..42426341,+ | |||
|coexpression_cluster_id=C74 | |coexpression_cluster_id=C74 | ||
|description=CAGE_peak_20_at_GRN_5end | |description=CAGE_peak_20_at_GRN_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!7.26e-14!24;CL:0000826!7.26e-14!24;CL:0002159!1.10e-11!13;CL:0002327!4.14e-11!4;CL:0000575!3.83e-10!2;CL:0000542!8.44e-10!53;CL:0000051!8.44e-10!53;CL:0000838!2.46e-08!52;CL:0002077!2.55e-07!33 | |ontology_enrichment_celltype=CL:0000945!7.26e-14!24;CL:0000826!7.26e-14!24;CL:0002159!1.10e-11!13;CL:0002327!4.14e-11!4;CL:0000575!3.83e-10!2;CL:0000542!8.44e-10!53;CL:0000051!8.44e-10!53;CL:0000838!2.46e-08!52;CL:0002077!2.55e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.49e-13;24!CL:0000575;3.18e-11;2!CL:0002623;4.84e-08;3 | |ontology_enrichment_celltype_v019=CL:0000945;1.49e-13;24!CL:0000575;3.18e-11;2!CL:0002623;4.84e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.23e-13,24;CL:0000826,1.23e-13,24;CL:0000575,4.52e-11,2;CL:0002623,4.84e-08,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0060058!4.87e-11!10 | |ontology_enrichment_disease=DOID:0060058!4.87e-11!10 | ||
|ontology_enrichment_disease_v019=DOID:630;4.66e-21;1!DOID:0050177;4.66e-21;1!DOID:0050427;4.66e-21;1 | |ontology_enrichment_disease_v019=DOID:630;4.66e-21;1!DOID:0050177;4.66e-21;1!DOID:0050427;4.66e-21;1 | ||
|ontology_enrichment_disease_v019_2=DOID:630,6.31e-21,1;DOID:0050177,6.31e-21,1;DOID:0050427,6.31e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0001911!4.14e-11!4;UBERON:0005333!4.14e-11!4;UBERON:0008425!4.14e-11!4;UBERON:0005311!4.14e-11!4 | |ontology_enrichment_uberon=UBERON:0001911!4.14e-11!4;UBERON:0005333!4.14e-11!4;UBERON:0008425!4.14e-11!4;UBERON:0005311!4.14e-11!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;4.52e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0002106;4.52e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,4.52e-08,3;UBERON:0004854,4.52e-08,3;UBERON:0009034,4.52e-08,3;UBERON:0002095,4.52e-08,3;UBERON:0004782,4.52e-08,3;UBERON:0003281,4.52e-08,3;UBERON:0009664,4.52e-08,3;UBERON:0002296,4.52e-08,3;UBERON:0005602,4.52e-08,3;UBERON:0001179,4.52e-08,3;UBERON:0006293,4.52e-08,3 | |||
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| ||
|short_description=p20@GRN | |short_description=p20@GRN | ||
}} | }} |
Latest revision as of 21:03, 24 September 2015
Short description: | p20@GRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_GRN_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | -184bp_to_uc002igq.1_5end |
EntrezGene: | GRN |
HGNC: | 4601 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.23e-13 | 24 |
pro-B cell | 1.23e-13 | 24 |
corneal epithelial cell | 4.52e-11 | 2 |
acinar cell of salivary gland | 4.84e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 4.52e-08 | 3 |
gastrointestinal system mesentery | 4.52e-08 | 3 |
stomach region | 4.52e-08 | 3 |
mesentery | 4.52e-08 | 3 |
gastrointestinal system serosa | 4.52e-08 | 3 |
mesentery of stomach | 4.52e-08 | 3 |
gut mesentery | 4.52e-08 | 3 |
dorsal mesentery | 4.52e-08 | 3 |
dorsal mesogastrium | 4.52e-08 | 3 |
peritoneal cavity | 4.52e-08 | 3 |
spleen primordium | 4.52e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 6.31e-21 | 1 |
monogenic disease | 6.31e-21 | 1 |
xeroderma pigmentosum | 6.31e-21 | 1 |