FFCP PHASE1:Hg19::chr22:31739411..31739446,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:31739411..31739446,-
|short_description=p5@PATZ1
|description=CAGE_peak_5_at_PATZ1_5end
|association_with_transcript=130bp_to_ENST00000465287_5end
|Entre...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23598 | |EntrezGene=23598 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13071 | |HGNC=13071 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=130bp_to_ENST00000465287_5end | |||
|cluster_id=chr22:31739411..31739446,- | |||
|coexpression_cluster_id=C43 | |||
|description=CAGE_peak_5_at_PATZ1_5end | |||
|id=chr22:31739411..31739446,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.05e-18;2!UBERON:0005754;4.08e-10;1!UBERON:0008425;4.46e-10;1!UBERON:0008801;7.49e-10;1!UBERON:0006298;1.68e-09;1!UBERON:0007123;1.01e-07;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;7.49e-10;1!DOID:1357;7.49e-10;1!DOID:5093;2.22e-09;4!DOID:1612;2.22e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,8.17e-10,1;DOID:1357,8.17e-10,1;DOID:5093,2.08e-09,4;DOID:1612,2.08e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.52e-11!169;UBERON:0000925!2.52e-11!169;UBERON:0006595!2.52e-11!169;UBERON:0001007!8.60e-11!155;UBERON:0001555!8.60e-11!155;UBERON:0007026!8.60e-11!155;UBERON:0004921!4.81e-10!129;UBERON:0004185!4.81e-10!129;UBERON:0007023!8.29e-10!115;UBERON:0000464!7.04e-09!104;UBERON:0006947!7.75e-09!3;UBERON:0004054!7.75e-09!3;UBERON:0001004!8.02e-09!72;UBERON:0000077!1.23e-07!130;UBERON:0000466!1.49e-07!126;UBERON:0000065!4.45e-07!53;UBERON:0002048!5.42e-07!22;UBERON:0000117!5.42e-07!22;UBERON:0000171!5.42e-07!22;UBERON:0000170!5.42e-07!22;UBERON:0005597!5.42e-07!22;UBERON:0000118!5.42e-07!22;UBERON:0000915!9.65e-07!52 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;8.75e-27;3!UBERON:0004054;8.75e-27;3!UBERON:0005904;2.99e-20;4!UBERON:0000341;1.29e-17;2!UBERON:0001829;1.29e-17;2!UBERON:0001044;3.15e-13;6!UBERON:0003293;3.15e-13;6!UBERON:0003294;3.15e-13;6!UBERON:0010047;3.15e-13;6!UBERON:0003408;3.15e-13;6!UBERON:0000167;3.15e-13;6!UBERON:0000974;3.72e-13;6!UBERON:0001000;3.74e-10;1!UBERON:0005352;3.74e-10;1!UBERON:0000998;4.08e-10;1!UBERON:0006868;4.08e-10;1!UBERON:0001301;4.86e-10;1!UBERON:0001831;7.49e-10;1!UBERON:0001764;7.49e-10;1!UBERON:0001825;7.49e-10;1!UBERON:0001567;7.49e-10;1!UBERON:0001736;1.68e-09;1!UBERON:0000058;2.06e-08;10!UBERON:0000310;4.65e-08;10!UBERON:0002046;1.01e-07;5!UBERON:0003135;1.09e-07;11!UBERON:0001443;2.28e-07;11!UBERON:0000161;2.69e-07;19!UBERON:0000166;2.69e-07;19!UBERON:0004175;8.88e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,8.77e-27,3;UBERON:0004054,8.77e-27,3;UBERON:0005904,3.00e-20,4;UBERON:0001829,1.04e-17,2;UBERON:0000341,1.23e-17,2;UBERON:0001044,2.84e-13,6;UBERON:0003293,2.84e-13,6;UBERON:0003294,2.84e-13,6;UBERON:0010047,2.84e-13,6;UBERON:0000167,2.84e-13,6;UBERON:0001000,3.74e-10,1;UBERON:0005352,3.74e-10,1;UBERON:0000998,4.09e-10,1;UBERON:0006868,4.09e-10,1;UBERON:0001301,4.87e-10,1;UBERON:0001764,8.17e-10,1;UBERON:0001825,8.17e-10,1;UBERON:0001831,8.91e-10,1;UBERON:0001567,8.91e-10,1;UBERON:0008801,8.91e-10,1;UBERON:0001736,1.15e-09,1;UBERON:0006298,1.15e-09,1;UBERON:0003408,3.64e-08,10;UBERON:0002530,3.69e-08,59;UBERON:0000310,4.11e-08,10;UBERON:0000974,4.54e-08,10;UBERON:0002046,8.83e-08,5;UBERON:0004117,8.83e-08,5;UBERON:0007689,8.83e-08,5;UBERON:0007123,8.83e-08,5;UBERON:0003091,8.83e-08,5;UBERON:0003135,1.09e-07,11;UBERON:0001443,2.04e-07,11;UBERON:0007023,4.22e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.593929361665277,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0.197286811273867,0,0,0,0,0,1.30213880542617,9.44567999958914,1.44999915086959,0.1137934482855,0,1.18193840883968,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,16.5725449196744,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,8.03742673913339,0,0,0,0,0,0,0.90392296312213,0,0,0,0,0.0801588202515337,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,1.04909176269996,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,1.40963004463334,0.213574825135389,0.78602152549833,0.828478110694391,0,0,0,1.91502377331055,0,0,0,0,2.19875734750328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06110208852154,0,0,0,0,0,0,0.225630985047772,0,0.781514011233092,0,0,0.147856086217045,0,0,0,0,0.546974809018219,2.19303106742873,0,0,1.02209942111676,0,0,0,0.455324382702595,0,0,0,0,0,0,0.111231401892069,1.25588948560822,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,3.01159151174194,0,0,13.1249985559188,2.7492824225286,0,0,0,0.098150233615243,0.243835849964539,0,0,0,0,0,0,0,0.5647304101948,0,0,0.0771741581079447,0.218559560503957,0.470317296361523,0,0.235676547101626,0.196308467114945,0,0,0,0,0,0,0,0,0.481448200135009,0.730336388246517,1.83491713361816,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27940389140589,2.3806443146374,0,0,0,2.48223917284843,2.82964064541507,0.217716747896961,0,0.202056159043763,1.07583308089015,0.99798106963804,0.0814032686109745,0,0,0,0,0,0.406896178315738,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.593929361665277,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0.197286811273867,0,0,0,0,0,1.30213880542617,9.44567999958914,1.44999915086959,0.1137934482855,0,1.18193840883968,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,16.5725449196744,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,8.03742673913339,0,0,0,0,0,0,0.90392296312213,0,0,0,0,0.0801588202515337,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,1.04909176269996,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,1.40963004463334,0.213574825135389,0.78602152549833,0.828478110694391,0,0,0,1.91502377331055,0,0,0,0,2.19875734750328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06110208852154,0,0,0,0,0,0,0.225630985047772,0,0.781514011233092,0,0,0.147856086217045,0,0,0,0,0.546974809018219,2.19303106742873,0,0,1.02209942111676,0,0,0,0.455324382702595,0,0,0,0,0,0,0.111231401892069,1.25588948560822,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,3.01159151174194,0,0,13.1249985559188,2.7492824225286,0,0,0,0.098150233615243,0.243835849964539,0,0,0,0,0,0,0,0.5647304101948,0,0,0.0771741581079447,0.218559560503957,0.470317296361523,0,0.235676547101626,0.196308467114945,0,0,0,0,0,0,0,0,0.481448200135009,0.730336388246517,1.83491713361816,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27940389140589,2.3806443146374,0,0,0,2.48223917284843,2.82964064541507,0.217716747896961,0,0.202056159043763,1.07583308089015,0.99798106963804,0.0814032686109745,0,0,0,0,0,0.406896178315738,0.665756774185513,0,0 | ||
|short_description=p5@PATZ1 | |||
}} | }} |
Latest revision as of 20:29, 19 September 2015
Short description: | p5@PATZ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PATZ1_5end |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | 130bp_to_ENST00000465287_5end |
EntrezGene: | PATZ1 |
HGNC: | 13071 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 8.77e-27 | 3 |
internal male genitalia | 8.77e-27 | 3 |
duct of male reproductive system | 3.00e-20 | 4 |
major salivary gland | 1.04e-17 | 2 |
throat | 1.23e-17 | 2 |
saliva-secreting gland | 2.84e-13 | 6 |
gland of oral region | 2.84e-13 | 6 |
gland of foregut | 2.84e-13 | 6 |
oral gland | 2.84e-13 | 6 |
oral cavity | 2.84e-13 | 6 |
vas deferens | 3.74e-10 | 1 |
spermatic cord | 3.74e-10 | 1 |
seminal vesicle | 4.09e-10 | 1 |
seminal fluid secreting gland | 4.09e-10 | 1 |
epididymis | 4.87e-10 | 1 |
maxillary sinus | 8.17e-10 | 1 |
paranasal sinus | 8.17e-10 | 1 |
parotid gland | 8.91e-10 | 1 |
cheek | 8.91e-10 | 1 |
parotid gland primordium | 8.91e-10 | 1 |
submandibular gland | 1.15e-09 | 1 |
submandibular gland primordium | 1.15e-09 | 1 |
gland of gut | 3.64e-08 | 10 |
gland | 3.69e-08 | 59 |
breast | 4.11e-08 | 10 |
neck | 4.54e-08 | 10 |
thyroid gland | 8.83e-08 | 5 |
pharyngeal pouch | 8.83e-08 | 5 |
thyroid diverticulum | 8.83e-08 | 5 |
pharyngeal pouch 2 | 8.83e-08 | 5 |
thyroid primordium | 8.83e-08 | 5 |
male reproductive organ | 1.09e-07 | 11 |
chest | 2.04e-07 | 11 |
adult organism | 4.22e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 8.17e-10 | 1 |
maxillary sinus cancer | 8.17e-10 | 1 |
thoracic cancer | 2.08e-09 | 4 |
breast cancer | 2.08e-09 | 4 |