FFCP PHASE1:Hg19::chr1:156642538..156642550,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10763 | |EntrezGene=10763 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7756 | |HGNC=7756 | ||
|TSSclassifier=strong | |||
|UniProt=P48681 | |UniProt=P48681 | ||
|association_with_transcript=-367bp_to_AB073350_5end | |association_with_transcript=-367bp_to_AB073350_5end | ||
|cluster_id=chr1:156642538..156642550,- | |||
|coexpression_cluster_id=C797 | |coexpression_cluster_id=C797 | ||
|description=CAGE_peak_10_at_NES_5end | |description=CAGE_peak_10_at_NES_5end | ||
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|ontology_enrichment_celltype=CL:0000133!2.19e-08!59;CL:0000115!4.61e-08!35;CL:0000540!4.67e-08!6;CL:0000031!4.67e-08!6;CL:0000404!4.67e-08!6;CL:0002139!7.65e-08!24;CL:0000047!7.99e-08!8;CL:0002319!1.02e-07!25;CL:0000071!7.78e-07!18;CL:0002546!7.78e-07!18 | |ontology_enrichment_celltype=CL:0000133!2.19e-08!59;CL:0000115!4.61e-08!35;CL:0000540!4.67e-08!6;CL:0000031!4.67e-08!6;CL:0000404!4.67e-08!6;CL:0002139!7.65e-08!24;CL:0000047!7.99e-08!8;CL:0002319!1.02e-07!25;CL:0000071!7.78e-07!18;CL:0002546!7.78e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002605;6.06e-36;3!CL:0000128;8.29e-16;7!CL:0000126;8.29e-16;7!CL:0000127;8.29e-16;7!CL:0002188;2.58e-10;5!CL:1000746;1.29e-07;7!CL:1000612;1.29e-07;7!CL:0002319;3.18e-07;25!CL:0002363;3.69e-07;2!CL:0002575;3.69e-07;2!CL:0000243;8.00e-07;15!CL:0000125;8.00e-07;15 | |ontology_enrichment_celltype_v019=CL:0002605;6.06e-36;3!CL:0000128;8.29e-16;7!CL:0000126;8.29e-16;7!CL:0000127;8.29e-16;7!CL:0002188;2.58e-10;5!CL:1000746;1.29e-07;7!CL:1000612;1.29e-07;7!CL:0002319;3.18e-07;25!CL:0002363;3.69e-07;2!CL:0002575;3.69e-07;2!CL:0000243;8.00e-07;15!CL:0000125;8.00e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.77e-35,3;CL:0000128,1.31e-15,7;CL:0000126,1.31e-15,7;CL:0000127,1.31e-15,7;CL:0002453,1.31e-15,7;CL:0002188,2.35e-10,5;CL:1000746,1.21e-07,7;CL:1000612,1.21e-07,7;CL:0002319,3.35e-07,25;CL:0002363,4.98e-07,2;CL:0000008,4.98e-07,2;CL:0002575,5.28e-07,2;CL:0000243,9.59e-07,15;CL:0000125,9.59e-07,15;CL:0000030,9.59e-07,15;CL:0000339,9.59e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000008;3.69e-07;2!CL:0000339;8.00e-07;15 | |ontology_enrichment_development_v019=CL:0000008;3.69e-07;2!CL:0000339;8.00e-07;15 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002203!4.86e-07!6;UBERON:0001768!4.86e-07!6;UBERON:0001986!7.78e-07!18;UBERON:0004638!7.78e-07!18;UBERON:0004852!7.78e-07!18 | |ontology_enrichment_uberon=UBERON:0002203!4.86e-07!6;UBERON:0001768!4.86e-07!6;UBERON:0001986!7.78e-07!18;UBERON:0004638!7.78e-07!18;UBERON:0004852!7.78e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0000074;1.29e-07;7!UBERON:0001229;1.29e-07;7!UBERON:0003566;3.69e-07;2!UBERON:0001777;3.69e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000074;1.29e-07;7!UBERON:0001229;1.29e-07;7!UBERON:0003566;3.69e-07;2!UBERON:0001777;3.69e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,1.21e-07,7;UBERON:0000074,1.21e-07,7;UBERON:0001229,1.21e-07,7;UBERON:0001230,1.21e-07,7;UBERON:0003220,1.21e-07,7;UBERON:0005749,1.21e-07,7;UBERON:0004199,1.21e-07,7;UBERON:0004209,1.21e-07,7;UBERON:0004198,1.21e-07,7;UBERON:0003566,4.98e-07,2;UBERON:0001777,4.98e-07,2;UBERON:0005103,8.60e-07,8;UBERON:0000083,8.60e-07,8;UBERON:0009201,8.60e-07,8;UBERON:0006553,8.60e-07,8;UBERON:0003074,8.60e-07,8;UBERON:0003060,8.60e-07,8 | |||
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|short_description=p10@NES | |short_description=p10@NES | ||
}} | }} |
Latest revision as of 17:09, 17 September 2015
Short description: | p10@NES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_NES_5end |
Coexpression cluster: | C797_mesenchymal_skeletal_Endothelial_Pericytes_Skeletal_Astrocyte_left |
Association with transcript: | -367bp_to_AB073350_5end |
EntrezGene: | NES |
HGNC: | 7756 |
UniProt: | P48681 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.77e-35 | 3 |
oligodendrocyte | 1.31e-15 | 7 |
macroglial cell | 1.31e-15 | 7 |
astrocyte | 1.31e-15 | 7 |
oligodendrocyte precursor cell | 1.31e-15 | 7 |
glomerular endothelial cell | 2.35e-10 | 5 |
glomerular cell | 1.21e-07 | 7 |
kidney corpuscule cell | 1.21e-07 | 7 |
neural cell | 3.35e-07 | 25 |
keratocyte | 4.98e-07 | 2 |
migratory cranial neural crest cell | 4.98e-07 | 2 |
central nervous system pericyte | 5.28e-07 | 2 |
glial cell (sensu Vertebrata) | 9.59e-07 | 15 |
glial cell | 9.59e-07 | 15 |
glioblast | 9.59e-07 | 15 |
glioblast (sensu Vertebrata) | 9.59e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 1.21e-07 | 7 |
renal glomerulus | 1.21e-07 | 7 |
renal corpuscle | 1.21e-07 | 7 |
glomerular capsule | 1.21e-07 | 7 |
metanephric mesenchyme | 1.21e-07 | 7 |
glomerular tuft | 1.21e-07 | 7 |
S-shaped body | 1.21e-07 | 7 |
renal vesicle | 1.21e-07 | 7 |
comma-shaped body | 1.21e-07 | 7 |
head connective tissue | 4.98e-07 | 2 |
substantia propria of cornea | 4.98e-07 | 2 |
mesonephric epithelium | 8.60e-07 | 8 |
mesonephric tubule | 8.60e-07 | 8 |
nephric duct | 8.60e-07 | 8 |
renal duct | 8.60e-07 | 8 |
mesonephric duct | 8.60e-07 | 8 |
pronephric duct | 8.60e-07 | 8 |