FFCP PHASE1:Hg19::chr2:238616388..238616397,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:238616388..238616397,+ | |||
|coexpression_cluster_id=C487 | |coexpression_cluster_id=C487 | ||
|description=CAGE_peak_at_chr2:238616388..238616397,+ | |description=CAGE_peak_at_chr2:238616388..238616397,+ | ||
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|ontology_enrichment_celltype=CL:0000623!1.01e-22!3;CL:0000825!1.01e-22!3;CL:0000898!7.49e-11!3;CL:0000810!1.27e-08!1;CL:0000895!1.27e-08!1;CL:0002436!1.27e-08!1;CL:0002427!1.27e-08!1;CL:0002428!1.27e-08!1;CL:0002429!1.27e-08!1;CL:0002433!1.27e-08!1;CL:0002431!1.27e-08!1;CL:0002432!1.27e-08!1;CL:0002274!9.98e-07!5;CL:0000457!9.98e-07!5;CL:0002191!9.98e-07!5;CL:0000097!9.98e-07!5;CL:0000831!9.98e-07!5;CL:0002028!9.98e-07!5 | |ontology_enrichment_celltype=CL:0000623!1.01e-22!3;CL:0000825!1.01e-22!3;CL:0000898!7.49e-11!3;CL:0000810!1.27e-08!1;CL:0000895!1.27e-08!1;CL:0002436!1.27e-08!1;CL:0002427!1.27e-08!1;CL:0002428!1.27e-08!1;CL:0002429!1.27e-08!1;CL:0002433!1.27e-08!1;CL:0002431!1.27e-08!1;CL:0002432!1.27e-08!1;CL:0002274!9.98e-07!5;CL:0000457!9.98e-07!5;CL:0002191!9.98e-07!5;CL:0000097!9.98e-07!5;CL:0000831!9.98e-07!5;CL:0002028!9.98e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000815;8.10e-26;2!CL:0000792;8.10e-26;2!CL:0002677;8.10e-26;2!CL:0000898;1.03e-17;3!CL:0000624;1.50e-09;6 | |ontology_enrichment_celltype_v019=CL:0000815;8.10e-26;2!CL:0000792;8.10e-26;2!CL:0002677;8.10e-26;2!CL:0000898;1.03e-17;3!CL:0000624;1.50e-09;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000815,7.14e-26,2;CL:0000792,7.14e-26,2;CL:0002677,7.14e-26,2;CL:0000898,9.46e-18,3;CL:0000624,1.44e-09,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001882!3.28e-08!1;UBERON:0005403!3.28e-08!1;UBERON:0002363!3.53e-08!1;UBERON:0007647!3.53e-08!1;UBERON:0010115!3.53e-08!1;UBERON:0002022!4.07e-08!1 | |ontology_enrichment_uberon=UBERON:0001882!3.28e-08!1;UBERON:0005403!3.28e-08!1;UBERON:0002363!3.53e-08!1;UBERON:0007647!3.53e-08!1;UBERON:0010115!3.53e-08!1;UBERON:0002022!4.07e-08!1 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr2:238616388..238616397,+ | |short_description=p@chr2:238616388..238616397,+ | ||
}} | }} |
Latest revision as of 08:16, 29 July 2015
Short description: | p@chr2:238616388..238616397, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:238616388..238616397, + |
Coexpression cluster: | C487_CD4_Peripheral_CD8_Natural_CD14_immature_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 7.14e-26 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.14e-26 | 2 |
naive regulatory T cell | 7.14e-26 | 2 |
naive T cell | 9.46e-18 | 3 |
CD4-positive, alpha-beta T cell | 1.44e-09 | 6 |