FFCP PHASE1:Hg19::chr1:100435986..100436014,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23443 | |EntrezGene=23443 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11023 | |HGNC=11023 | ||
|TSSclassifier=strong | |||
|UniProt=E9PPQ9 | |UniProt=E9PPQ9 | ||
|association_with_transcript=0bp_to_ENST00000532693,ENST00000533028,uc001dsr.1_5end | |association_with_transcript=0bp_to_ENST00000532693,ENST00000533028,uc001dsr.1_5end | ||
|cluster_id=chr1:100435986..100436014,+ | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_4_at_SLC35A3_5end | |description=CAGE_peak_4_at_SLC35A3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000066!7.32e-08!254 | |ontology_enrichment_celltype=CL:0000066!7.32e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0002541;8.82e-07;3 | |ontology_enrichment_celltype_v019=CL:0002541;8.82e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,8.84e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!4.65e-13!106;DOID:0050687!8.23e-11!143;DOID:299!1.01e-10!25 | |ontology_enrichment_disease=DOID:305!4.65e-13!106;DOID:0050687!8.23e-11!143;DOID:299!1.01e-10!25 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!7.95e-09!169;UBERON:0000925!7.95e-09!169;UBERON:0006595!7.95e-09!169;UBERON:0001007!6.89e-08!155;UBERON:0001555!6.89e-08!155;UBERON:0007026!6.89e-08!155;UBERON:0004921!2.46e-07!129;UBERON:0004185!2.46e-07!129 | |ontology_enrichment_uberon=UBERON:0004119!7.95e-09!169;UBERON:0000925!7.95e-09!169;UBERON:0006595!7.95e-09!169;UBERON:0001007!6.89e-08!155;UBERON:0001555!6.89e-08!155;UBERON:0007026!6.89e-08!155;UBERON:0004921!2.46e-07!129;UBERON:0004185!2.46e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;8.78e-17;17!UBERON:0002108;6.16e-13;4!UBERON:0005409;9.06e-13;22!UBERON:0000310;4.22e-10;10!UBERON:0000059;2.62e-09;11!UBERON:0001443;3.75e-09;11!UBERON:0004921;4.68e-09;33!UBERON:0003127;5.13e-09;2!UBERON:0001155;9.53e-08;9!UBERON:0005631;3.51e-07;10!UBERON:0000158;3.51e-07;10!UBERON:0003124;8.82e-07;3!UBERON:0000920;8.82e-07;3!UBERON:0003688;9.10e-07;6!UBERON:0002358;9.10e-07;6!UBERON:0003684;9.10e-07;6!UBERON:0001178;9.10e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0000160;8.78e-17;17!UBERON:0002108;6.16e-13;4!UBERON:0005409;9.06e-13;22!UBERON:0000310;4.22e-10;10!UBERON:0000059;2.62e-09;11!UBERON:0001443;3.75e-09;11!UBERON:0004921;4.68e-09;33!UBERON:0003127;5.13e-09;2!UBERON:0001155;9.53e-08;9!UBERON:0005631;3.51e-07;10!UBERON:0000158;3.51e-07;10!UBERON:0003124;8.82e-07;3!UBERON:0000920;8.82e-07;3!UBERON:0003688;9.10e-07;6!UBERON:0002358;9.10e-07;6!UBERON:0003684;9.10e-07;6!UBERON:0001178;9.10e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.02e-16,17;UBERON:0002108,1.14e-12,4;UBERON:0005409,4.64e-11,25;UBERON:0000310,3.60e-10,10;UBERON:0000059,2.13e-09,11;UBERON:0003127,2.74e-09,2;UBERON:0001443,3.25e-09,11;UBERON:0001155,9.99e-08,9;UBERON:0003688,7.27e-07,6;UBERON:0002358,7.27e-07,6;UBERON:0003684,7.27e-07,6;UBERON:0001178,7.27e-07,6;UBERON:0000920,8.84e-07,3 | |||
|phase1_expression=2.36181893051724,0.856402095563933,1.83240725324762,3.00219895059391,0.893922188854576,0.872338524100369,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0.383829398097213,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0.393010762749165,0,0,0,0.473447805734733,0,0,0.294605907474837,0,0,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0.383587685530591,0,0.50133791063589,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0.825354125820202,0.417989933073621,0.258416759169329,0.71153252537342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0.397227542439656,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0.226864366320042,0.89694817844431,0.213557388818567,0,0.300091096084402,0.309157587715317,0.257640540045629,0.18611685633159,0.675105328965065,0.292311015483596,0,0.184099797284599,0,0,0.201504196455281,0.169560592310488,0.773043412653187,0.272746120590835,0.286804595389004,0,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.591534000199219,0.674338760312407,0.723033089650446,0.110293972732394,0.653638332277218,0.71181185733329,0.539325232640658,0,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0.343135620597051,0.768251997860379,1.1240175325762,0,0,0,0,0,0,0.234817388471643,0,0,0,0,2.57545848628462,0,0,0,0,0.503946384596579,0.283550194484773,0.626909658919938,0.290633938513962,0,0.492663237895943,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,1.59259437334337,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0.744323423456331,2.60885354589706,1.68396056659844,0.896974044789907,4.09365799253363,0.482561763430822,2.96836132889982,0,0,0,0,0,0.362578348774867,2.80709058424599,1.56537681191024,0,0.182091168006717,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0.382838137483752,0.4046311234222,0.464845549297286,1.88887408098384,0,0.616067160352178,0,0.869932992075073,0.37064843820784,0.286249773483982,0,0,0,0,0,0,0.78494864019923,0,0,0,0,1.58510321173008,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0.876901770507525,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,1.23087398947712,0,0,0,3.55567026775618,0,0.121360521749513,0,0,10.027268358983,0.593929361665277,11.6721066797708,0,0,0,0,0,0.19924798825107,2.48655523978033,0,0,0.369254416383208,1.55519793830904,0.0898683511473268,0.716084698702437,0,0.0986434056369336,0,0,0,0,0,0.7812832832557,2.44887999989348,0,0,1.01701460117107,0.472775363535873,0.344743373241465,0,0,0,0,0,0,0,0,0.21787692703798,0,0.384751292518985,0,0,0.628303510868405,2.06430006651815,7.97502899329799,0.824378340616761,8.52855641629816,0,0,0,0,0,0,0,0,0.632994193584081,0.652931232636591,0.424059214301822,0,3.98104772431402,2.29989667708682,10.3875124638716,0,0,0,0,0,0.234264445725339,0.182454789215666,0.19566461893209,0,0.394584402849391,2.41981432097328,0,0.126373159256976,0.300646838828985,0,0,0,0,1.19472429772959,0.284609546029793,0.138674673013139,1.38847790668105,0.0979923974143777,0.174118413160805,0.17472666824203,0,0.290268993867255,0.292357268344742,0.328461828212837,0.969890164884194,0,0,0,0,0,1.17330829640882,0.400794101257669,0.85381197895741,0.39961921916426,0.288180834308212,0.229073192331831,0,0.14405479798815,0,0.471388069233591,0,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0.599037001496973,0,0,0,0,0,0,0.164831716762333,0,0,0.169346664131569,0.795229689809303,0,0.160753148465019,0,0,0,0.77380195455795,0,0,0,0.157363764404994,0.633602019116439,0,0,0,0,0.25426853765475,0,0.864221491201268,0.326587360109409,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0.704815022316672,1.17466153824464,0.157204305099666,0.414239055347196,0,0,0,0,0,0.7520696820681,0.306345576763462,0,0,0,0,0,0,0,0.124192805882767,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,1.06336685823198,1.04349012362347,0,0.380805212168795,1.62748293281865,0.181848659202559,0,0,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0.57785949122191,1.28664954824955,0,0,0.231522474323834,0.244736704506468,0.179088841081487,0,0.219284049578707,0,0.38582807654183,0.168942440653073,0.256241518587947,0,0,0,0,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| ||
|short_description=p4@SLC35A3 | |short_description=p4@SLC35A3 | ||
}} | }} |
Latest revision as of 03:38, 25 September 2015
Short description: | p4@SLC35A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC35A3_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 0bp_to_ENST00000532693, ENST00000533028, uc001dsr.1_5end |
EntrezGene: | SLC35A3 |
HGNC: | 11023 |
UniProt: | E9PPQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 8.84e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.02e-16 | 17 |
small intestine | 1.14e-12 | 4 |
gastrointestinal system | 4.64e-11 | 25 |
breast | 3.60e-10 | 10 |
large intestine | 2.13e-09 | 11 |
open tracheal system trachea | 2.74e-09 | 2 |
chest | 3.25e-09 | 11 |
colon | 9.99e-08 | 9 |
omentum | 7.27e-07 | 6 |
peritoneum | 7.27e-07 | 6 |
abdominal cavity | 7.27e-07 | 6 |
visceral peritoneum | 7.27e-07 | 6 |
egg chorion | 8.84e-07 | 3 |