FFCP PHASE1:Hg19::chr7:45952985..45952996,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3486 | |EntrezGene=3486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5472 | |HGNC=5472 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-309bp_to_S56205_5end | |association_with_transcript=-309bp_to_S56205_5end | ||
|cluster_id=chr7:45952985..45952996,- | |||
|coexpression_cluster_id=C223 | |coexpression_cluster_id=C223 | ||
|description=CAGE_peak_19_at_IGFBP3_5end | |description=CAGE_peak_19_at_IGFBP3_5end | ||
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|ontology_enrichment_celltype=CL:0000055!2.95e-14!180;CL:0000057!7.55e-14!75;CL:0002620!9.45e-13!23;CL:0000153!3.27e-08!9;CL:0000447!3.27e-08!9;CL:0002595!7.08e-08!5;CL:0002334!9.20e-08!12;CL:0000667!5.13e-07!6;CL:0000058!5.13e-07!6;CL:0000138!5.13e-07!6 | |ontology_enrichment_celltype=CL:0000055!2.95e-14!180;CL:0000057!7.55e-14!75;CL:0002620!9.45e-13!23;CL:0000153!3.27e-08!9;CL:0000447!3.27e-08!9;CL:0002595!7.08e-08!5;CL:0002334!9.20e-08!12;CL:0000667!5.13e-07!6;CL:0000058!5.13e-07!6;CL:0000138!5.13e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.63e-17;23!CL:0000138;4.94e-13;6!CL:0000153;5.26e-13;9!CL:0000447;5.26e-13;9!CL:0000327;1.35e-10;15!CL:0000499;2.65e-09;28!CL:0002595;1.34e-08;5!CL:0000135;4.73e-07;3!CL:0000388;4.73e-07;3!CL:0002615;9.59e-07;3 | |ontology_enrichment_celltype_v019=CL:0002620;1.63e-17;23!CL:0000138;4.94e-13;6!CL:0000153;5.26e-13;9!CL:0000447;5.26e-13;9!CL:0000327;1.35e-10;15!CL:0000499;2.65e-09;28!CL:0002595;1.34e-08;5!CL:0000135;4.73e-07;3!CL:0000388;4.73e-07;3!CL:0002615;9.59e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.53e-17,23;CL:0000057,1.76e-14,76;CL:0000153,4.67e-13,9;CL:0000447,4.67e-13,9;CL:0000058,4.88e-13,6;CL:0000138,4.88e-13,6;CL:0000327,1.06e-10,15;CL:0000499,2.16e-09,28;CL:0002595,1.36e-08,5;CL:0000135,4.33e-07,3;CL:0000388,4.33e-07,3;CL:0002615,8.06e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!4.63e-08!5;DOID:450!4.63e-08!5;DOID:66!4.63e-08!5;DOID:423!4.63e-08!5;DOID:0080000!4.63e-08!5;DOID:11722!4.63e-08!5 | |ontology_enrichment_disease=DOID:17!4.63e-08!5;DOID:450!4.63e-08!5;DOID:66!4.63e-08!5;DOID:423!4.63e-08!5;DOID:0080000!4.63e-08!5;DOID:11722!4.63e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:17;2.56e-14;5!DOID:450;2.56e-14;5!DOID:66;2.56e-14;5!DOID:423;2.56e-14;5!DOID:0080000;2.56e-14;5!DOID:11722;2.56e-14;5 | |ontology_enrichment_disease_v019=DOID:17;2.56e-14;5!DOID:450;2.56e-14;5!DOID:66;2.56e-14;5!DOID:423;2.56e-14;5!DOID:0080000;2.56e-14;5!DOID:11722;2.56e-14;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,3.28e-14,5;DOID:450,3.28e-14,5;DOID:66,3.28e-14,5;DOID:423,3.28e-14,5;DOID:0080000,3.28e-14,5;DOID:11722,3.28e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0003688!5.33e-09!6;UBERON:0002358!5.33e-09!6;UBERON:0003684!5.33e-09!6;UBERON:0001178!5.33e-09!6;UBERON:0004457!2.11e-08!12;UBERON:0000042!2.11e-08!12;UBERON:0005631!2.63e-08!14;UBERON:0000158!2.63e-08!14;UBERON:0003834!7.08e-08!5;UBERON:0001533!7.08e-08!5;UBERON:0002199!1.80e-07!45;UBERON:0002416!1.80e-07!45;UBERON:0002097!3.41e-07!40;UBERON:0003124!8.46e-07!7 | |ontology_enrichment_uberon=UBERON:0003688!5.33e-09!6;UBERON:0002358!5.33e-09!6;UBERON:0003684!5.33e-09!6;UBERON:0001178!5.33e-09!6;UBERON:0004457!2.11e-08!12;UBERON:0000042!2.11e-08!12;UBERON:0005631!2.63e-08!14;UBERON:0000158!2.63e-08!14;UBERON:0003834!7.08e-08!5;UBERON:0001533!7.08e-08!5;UBERON:0002199!1.80e-07!45;UBERON:0002416!1.80e-07!45;UBERON:0002097!3.41e-07!40;UBERON:0003124!8.46e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;7.16e-12;9!UBERON:0000042;7.16e-12;9!UBERON:0003688;1.18e-11;6!UBERON:0002358;1.18e-11;6!UBERON:0003684;1.18e-11;6!UBERON:0001178;1.18e-11;6!UBERON:0002097;3.79e-09;41!UBERON:0003834;1.34e-08;5!UBERON:0001533;1.34e-08;5!UBERON:0002199;2.71e-07;46!UBERON:0002416;2.71e-07;46!UBERON:0007846;4.73e-07;3!UBERON:0000043;4.73e-07;3!UBERON:0007845;4.73e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0004457;7.16e-12;9!UBERON:0000042;7.16e-12;9!UBERON:0003688;1.18e-11;6!UBERON:0002358;1.18e-11;6!UBERON:0003684;1.18e-11;6!UBERON:0001178;1.18e-11;6!UBERON:0002097;3.79e-09;41!UBERON:0003834;1.34e-08;5!UBERON:0001533;1.34e-08;5!UBERON:0002199;2.71e-07;46!UBERON:0002416;2.71e-07;46!UBERON:0007846;4.73e-07;3!UBERON:0000043;4.73e-07;3!UBERON:0007845;4.73e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,7.97e-12,6;UBERON:0002358,7.97e-12,6;UBERON:0003684,7.97e-12,6;UBERON:0001178,7.97e-12,6;UBERON:0002097,4.93e-11,41;UBERON:0002199,1.35e-09,46;UBERON:0002416,1.35e-09,46;UBERON:0004457,5.64e-09,12;UBERON:0000042,5.64e-09,12;UBERON:0003834,1.36e-08,5;UBERON:0001533,1.36e-08,5;UBERON:0007846,4.33e-07,3;UBERON:0000043,4.33e-07,3;UBERON:0007845,4.33e-07,3 | |||
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|short_description=p19@IGFBP3 | |short_description=p19@IGFBP3 | ||
}} | }} |
Latest revision as of 19:32, 18 September 2015
Short description: | p19@IGFBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_IGFBP3_5end |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | -309bp_to_S56205_5end |
EntrezGene: | IGFBP3 |
HGNC: | 5472 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.53e-17 | 23 |
fibroblast | 1.76e-14 | 76 |
GAG secreting cell | 4.67e-13 | 9 |
carbohydrate secreting cell | 4.67e-13 | 9 |
chondroblast | 4.88e-13 | 6 |
chondrocyte | 4.88e-13 | 6 |
extracellular matrix secreting cell | 1.06e-10 | 15 |
stromal cell | 2.16e-09 | 28 |
smooth muscle cell of the subclavian artery | 1.36e-08 | 5 |
fibrocyte | 4.33e-07 | 3 |
tendon cell | 4.33e-07 | 3 |
adipocyte of omentum tissue | 8.06e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 7.97e-12 | 6 |
peritoneum | 7.97e-12 | 6 |
abdominal cavity | 7.97e-12 | 6 |
visceral peritoneum | 7.97e-12 | 6 |
skin of body | 4.93e-11 | 41 |
integument | 1.35e-09 | 46 |
integumental system | 1.35e-09 | 46 |
cavity lining | 5.64e-09 | 12 |
serous membrane | 5.64e-09 | 12 |
thoracic segment blood vessel | 1.36e-08 | 5 |
subclavian artery | 1.36e-08 | 5 |
dense regular connective tissue | 4.33e-07 | 3 |
tendon | 4.33e-07 | 3 |
regular connective tissue | 4.33e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.28e-14 | 5 |
myotonic disease | 3.28e-14 | 5 |
muscle tissue disease | 3.28e-14 | 5 |
myopathy | 3.28e-14 | 5 |
muscular disease | 3.28e-14 | 5 |
myotonic dystrophy | 3.28e-14 | 5 |