FFCP PHASE1:Hg19::chr12:120032754..120032778,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-448bp_to_ENST00000509470,uc001txf.2_5end | |association_with_transcript=-448bp_to_ENST00000509470,uc001txf.2_5end | ||
|cluster_id=chr12:120032754..120032778,- | |||
|description=CAGE_peak_1_at_ENST00000509470_5end,CAGE_peak_1_at_uc001txf.2_5end | |description=CAGE_peak_1_at_ENST00000509470_5end,CAGE_peak_1_at_uc001txf.2_5end | ||
|id=chr12:120032754..120032778,- | |id=chr12:120032754..120032778,- | ||
|ontology_enrichment_celltype=CL:0000188!3.11e-09!9 | |ontology_enrichment_celltype=CL:0000188!3.11e-09!9 | ||
|ontology_enrichment_celltype_v019=CL:0000097;7.40e-20;5!CL:0000228;5.32e-12;1!CL:0002372;5.32e-12;1!CL:0000056;1.32e-11;4!CL:0000163;2.69e-11;9!CL:0000680;5.34e-07;7 | |ontology_enrichment_celltype_v019=CL:0000097;7.40e-20;5!CL:0000228;5.32e-12;1!CL:0002372;5.32e-12;1!CL:0000056;1.32e-11;4!CL:0000163;2.69e-11;9!CL:0000680;5.34e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,9.56e-20,5;CL:0002028,9.56e-20,5;CL:0000228,4.53e-12,1;CL:0002372,4.53e-12,1;CL:0000515,1.07e-11,4;CL:0000163,3.09e-11,9 | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.32e-12;1!CL:0000515;1.32e-11;4 | |ontology_enrichment_development_v019=UBERON:0000358;5.32e-12;1!CL:0000515;1.32e-11;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.25e-15!115;UBERON:0000483!6.83e-10!309;UBERON:0000119!1.41e-09!312;UBERON:0002385!2.67e-07!63;UBERON:0001015!2.67e-07!63;UBERON:0000383!2.67e-07!63;UBERON:0004290!7.32e-07!70 | |ontology_enrichment_uberon=UBERON:0007023!5.25e-15!115;UBERON:0000483!6.83e-10!309;UBERON:0000119!1.41e-09!312;UBERON:0002385!2.67e-07!63;UBERON:0001015!2.67e-07!63;UBERON:0000383!2.67e-07!63;UBERON:0004290!7.32e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;5.32e-12;1!UBERON:0005208;5.32e-12;1!UBERON:0004145;5.32e-12;1!UBERON:0005946;5.32e-12;1!UBERON:0005965;5.32e-12;1!UBERON:0002078;5.32e-12;1!UBERON:0001389;1.19e-11;1!UBERON:0000026;1.19e-11;1!UBERON:0008784;1.19e-11;1!UBERON:0006058;1.19e-11;1!UBERON:0003663;1.19e-11;1!UBERON:0004256;1.19e-11;1!UBERON:0004708;1.19e-11;1!UBERON:0002101;1.19e-11;1!UBERON:0004709;1.19e-11;1!UBERON:0002529;1.19e-11;1!UBERON:0010538;1.19e-11;1!UBERON:0003661;1.19e-11;1!UBERON:0010890;1.19e-11;1!UBERON:0002471;1.19e-11;1!UBERON:0001383;1.19e-11;1!UBERON:0010758;1.19e-11;1!UBERON:0010707;1.19e-11;1!UBERON:0000978;1.19e-11;1!UBERON:0002103;1.19e-11;1!UBERON:0001665;1.19e-11;1!UBERON:0003823;1.19e-11;1!UBERON:0000154;1.19e-11;1!UBERON:0010709;1.19e-11;1!UBERON:0001134;1.04e-10;16!UBERON:0002036;1.04e-10;16 | |ontology_enrichment_uberon_v019=UBERON:0002134;5.32e-12;1!UBERON:0005208;5.32e-12;1!UBERON:0004145;5.32e-12;1!UBERON:0005946;5.32e-12;1!UBERON:0005965;5.32e-12;1!UBERON:0002078;5.32e-12;1!UBERON:0001389;1.19e-11;1!UBERON:0000026;1.19e-11;1!UBERON:0008784;1.19e-11;1!UBERON:0006058;1.19e-11;1!UBERON:0003663;1.19e-11;1!UBERON:0004256;1.19e-11;1!UBERON:0004708;1.19e-11;1!UBERON:0002101;1.19e-11;1!UBERON:0004709;1.19e-11;1!UBERON:0002529;1.19e-11;1!UBERON:0010538;1.19e-11;1!UBERON:0003661;1.19e-11;1!UBERON:0010890;1.19e-11;1!UBERON:0002471;1.19e-11;1!UBERON:0001383;1.19e-11;1!UBERON:0010758;1.19e-11;1!UBERON:0010707;1.19e-11;1!UBERON:0000978;1.19e-11;1!UBERON:0002103;1.19e-11;1!UBERON:0001665;1.19e-11;1!UBERON:0003823;1.19e-11;1!UBERON:0000154;1.19e-11;1!UBERON:0010709;1.19e-11;1!UBERON:0001134;1.04e-10;16!UBERON:0002036;1.04e-10;16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,6.26e-12,1;UBERON:0005208,6.26e-12,1;UBERON:0005946,6.26e-12,1;UBERON:0005965,6.26e-12,1;UBERON:0002078,6.26e-12,1;UBERON:0005418,1.32e-11,1;UBERON:0001389,1.32e-11,1;UBERON:0000026,1.32e-11,1;UBERON:0008784,1.32e-11,1;UBERON:0006058,1.32e-11,1;UBERON:0003663,1.32e-11,1;UBERON:0004256,1.32e-11,1;UBERON:0004708,1.32e-11,1;UBERON:0002101,1.32e-11,1;UBERON:0004709,1.32e-11,1;UBERON:0002529,1.32e-11,1;UBERON:0010538,1.32e-11,1;UBERON:0003661,1.32e-11,1;UBERON:0010890,1.32e-11,1;UBERON:0002471,1.32e-11,1;UBERON:0001383,1.32e-11,1;UBERON:0004357,1.32e-11,1;UBERON:0004347,1.32e-11,1;UBERON:0005420,1.32e-11,1;UBERON:0005732,1.32e-11,1;UBERON:0010758,1.32e-11,1;UBERON:0010707,1.32e-11,1;UBERON:0000978,1.32e-11,1;UBERON:0002103,1.32e-11,1;UBERON:0001665,1.32e-11,1;UBERON:0003823,1.32e-11,1;UBERON:0000154,1.32e-11,1;UBERON:0010709,1.32e-11,1;UBERON:0005733,1.32e-11,1;UBERON:0005730,1.32e-11,1 | |||
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|short_description=p1@ENST00000509470,p1@uc001txf.2 | |short_description=p1@ENST00000509470,p1@uc001txf.2 | ||
}} | }} |
Latest revision as of 05:39, 24 July 2015
Short description: | p1@ENST00000509470, p1@uc001txf.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000509470_5end, CAGE_peak_1_at_uc001txf.2_5end |
Coexpression cluster: | NA |
Association with transcript: | -448bp_to_ENST00000509470, uc001txf.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 9.56e-20 | 5 |
basophil mast progenitor cell | 9.56e-20 | 5 |
multinucleate cell | 4.53e-12 | 1 |
myotube | 4.53e-12 | 1 |
skeletal muscle myoblast | 1.07e-11 | 4 |
endocrine cell | 3.09e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 6.26e-12 | 1 |
right atrium valve | 6.26e-12 | 1 |
outflow tract of atrium | 6.26e-12 | 1 |
outflow part of right atrium | 6.26e-12 | 1 |
right cardiac atrium | 6.26e-12 | 1 |
hindlimb bud | 1.32e-11 | 1 |
soleus muscle | 1.32e-11 | 1 |
appendage | 1.32e-11 | 1 |
lower limb segment | 1.32e-11 | 1 |
multi-limb segment region | 1.32e-11 | 1 |
hindlimb muscle | 1.32e-11 | 1 |
hindlimb zeugopod muscle | 1.32e-11 | 1 |
paired limb/fin | 1.32e-11 | 1 |
limb | 1.32e-11 | 1 |
pelvic appendage | 1.32e-11 | 1 |
limb segment | 1.32e-11 | 1 |
paired limb/fin segment | 1.32e-11 | 1 |
limb muscle | 1.32e-11 | 1 |
pelvic complex muscle | 1.32e-11 | 1 |
zeugopod | 1.32e-11 | 1 |
muscle of leg | 1.32e-11 | 1 |
paired limb/fin bud | 1.32e-11 | 1 |
limb bud | 1.32e-11 | 1 |
pelvic appendage bud | 1.32e-11 | 1 |
limb/fin field | 1.32e-11 | 1 |
subdivision of organism along appendicular axis | 1.32e-11 | 1 |
appendage girdle complex | 1.32e-11 | 1 |
leg | 1.32e-11 | 1 |
hindlimb | 1.32e-11 | 1 |
triceps surae | 1.32e-11 | 1 |
hindlimb zeugopod | 1.32e-11 | 1 |
posterior region of body | 1.32e-11 | 1 |
pelvic complex | 1.32e-11 | 1 |
limb field | 1.32e-11 | 1 |
hindlimb/pelvic fin field | 1.32e-11 | 1 |