FFCP PHASE1:Hg19::chr11:2018440..2018456,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000411861_5end | |association_with_transcript=0bp_to_ENST00000411861_5end | ||
|cluster_id=chr11:2018440..2018456,- | |||
|coexpression_cluster_id=C227 | |coexpression_cluster_id=C227 | ||
|description=CAGE_peak_5_at_H19_5end | |description=CAGE_peak_5_at_H19_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;6.64e-16;19!CL:0000188;3.77e-07;9 | |ontology_enrichment_celltype_v019=CL:0000349;6.64e-16;19!CL:0000188;3.77e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.82e-16,19;CL:0000188,3.93e-07,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!7.75e-12!238;UBERON:0009142!7.75e-12!238;UBERON:0005631!6.49e-11!14;UBERON:0000158!6.49e-11!14;UBERON:0001737!3.02e-10!9;UBERON:0000478!4.68e-10!24;UBERON:0000481!4.95e-10!347;UBERON:0001557!6.55e-10!19;UBERON:0004923!1.44e-09!57;UBERON:0004119!7.32e-09!169;UBERON:0000925!7.32e-09!169;UBERON:0006595!7.32e-09!169;UBERON:0003124!1.91e-08!7;UBERON:0000077!3.47e-08!130;UBERON:0001007!4.48e-08!155;UBERON:0001555!4.48e-08!155;UBERON:0007026!4.48e-08!155;UBERON:0003103!4.77e-08!69;UBERON:0004921!6.75e-08!129;UBERON:0004185!6.75e-08!129;UBERON:0000064!1.91e-07!219;UBERON:0001041!4.06e-07!98;UBERON:0002100!6.32e-07!216;UBERON:0000926!6.56e-07!448;UBERON:0004120!6.56e-07!448;UBERON:0006603!6.56e-07!448;UBERON:0000468!9.41e-07!659 | |ontology_enrichment_uberon=UBERON:0003104!7.75e-12!238;UBERON:0009142!7.75e-12!238;UBERON:0005631!6.49e-11!14;UBERON:0000158!6.49e-11!14;UBERON:0001737!3.02e-10!9;UBERON:0000478!4.68e-10!24;UBERON:0000481!4.95e-10!347;UBERON:0001557!6.55e-10!19;UBERON:0004923!1.44e-09!57;UBERON:0004119!7.32e-09!169;UBERON:0000925!7.32e-09!169;UBERON:0006595!7.32e-09!169;UBERON:0003124!1.91e-08!7;UBERON:0000077!3.47e-08!130;UBERON:0001007!4.48e-08!155;UBERON:0001555!4.48e-08!155;UBERON:0007026!4.48e-08!155;UBERON:0003103!4.77e-08!69;UBERON:0004921!6.75e-08!129;UBERON:0004185!6.75e-08!129;UBERON:0000064!1.91e-07!219;UBERON:0001041!4.06e-07!98;UBERON:0002100!6.32e-07!216;UBERON:0000926!6.56e-07!448;UBERON:0004120!6.56e-07!448;UBERON:0006603!6.56e-07!448;UBERON:0000468!9.41e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.46e-15;16!UBERON:0002036;1.46e-15;16!UBERON:0000478;2.26e-15;24!UBERON:0001737;3.40e-14;9!UBERON:0001557;3.40e-14;9!UBERON:0005631;3.13e-10;10!UBERON:0000158;3.13e-10;10!UBERON:0001987;2.53e-07;4!UBERON:0003688;4.70e-07;6!UBERON:0002358;4.70e-07;6!UBERON:0003684;4.70e-07;6!UBERON:0001178;4.70e-07;6!UBERON:0002385;5.85e-07;31!UBERON:0001015;5.85e-07;31!UBERON:0000383;5.85e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0001134;1.46e-15;16!UBERON:0002036;1.46e-15;16!UBERON:0000478;2.26e-15;24!UBERON:0001737;3.40e-14;9!UBERON:0001557;3.40e-14;9!UBERON:0005631;3.13e-10;10!UBERON:0000158;3.13e-10;10!UBERON:0001987;2.53e-07;4!UBERON:0003688;4.70e-07;6!UBERON:0002358;4.70e-07;6!UBERON:0003684;4.70e-07;6!UBERON:0001178;4.70e-07;6!UBERON:0002385;5.85e-07;31!UBERON:0001015;5.85e-07;31!UBERON:0000383;5.85e-07;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.01e-15,14;UBERON:0000158,1.01e-15,14;UBERON:0000478,2.30e-15,24;UBERON:0001737,3.39e-14,9;UBERON:0001557,7.75e-12,19;UBERON:0003124,1.40e-11,7;UBERON:0003104,1.03e-09,160;UBERON:0009142,1.03e-09,160;UBERON:0001041,9.57e-08,87;UBERON:0001987,2.51e-07,4;UBERON:0004340,2.51e-07,4;UBERON:0004923,4.14e-07,66;UBERON:0003688,4.43e-07,6;UBERON:0002358,4.43e-07,6;UBERON:0003684,4.43e-07,6;UBERON:0001178,4.43e-07,6;UBERON:0005256,4.82e-07,122 | |||
|phase1_expression=2.18014055124668,2.14100523890983,1.26858963686374,5.00366491765652,5.36353313312745,27.0424942471114,0,0,0,0.982935746006035,6.97801167972428,50.6783983342,45.6316872335225,1.36142988256051,5.63375538737457,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,1.39334510984468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,1.02290049474824,0,0,0.144846518960824,0,6.32625331393427,0.0945348171640679,0,0,0.261958150995425,0,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,9.53151920241922,0,0,0.622422070799533,0,0.326923806226917,3.78393569112329,38.0276110156799,1.17160715916898,0,0,0,0.117434498643765,0,0.140450806702248,0,0.368502951935304,0,0,0,0,0.718618141816238,0.336672227908132,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.646584227275248,0,0,0,0,0,0,0,0.132529768321485,4.76395165765025,1.24393266018445,0.252320850875628,0,0,0,0,0,0,47.4410268159774,32.8740145652298,37.1156986020562,47.867584165859,37.6931438279863,41.9968995826641,45.3033195418152,33.5538705364342,38.8594628515854,5.90524363699719,4.20725321410337,2.4694440679884,23.5213938216867,0,0,4.72631925345123,0,0,0,0,0,0,6.20342582562148,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28680194292333,116.121023553769,1.64648067356154,0,2.48774364119782,3.16780749173372,0,0,0,0,0,0,0,1.14861935834114,0,9.55556624006023,21.7804901903406,4.83464600747718,0,0,0,0,0,0,2.31986643833309,0,0.637938751653163,0,0,0,6.01188309423785,6.5022167737758,2.44138521329762,0,0,0.157702415033935,0.117141414992713,0.601892199455438,0,9.31257641632544,0,0.553107505625109,0,46.6006754761323,110.492182467096,0,0,0,39.1034567165675,111.511744472033,119.746556158553,2.48107807818777,0.460385919864187,3.92924132206303,3.07533958213682,1.53512174720011,2.73451665944133,31.1677939534481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,0.510281115829547,0.215915916102139,6.16909010761157,0,1.00337954770971,0,0,0,0,0,0,0,0,5.66725564062472,0,0,0,0,0,5.60690166094307,4.1593126620954,5.98664331431905,7.44317491416465,0.859361958946189,10.2961852679102,5.28405089979826,34.8115259378743,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,1.48863347743867,0.949138274156178,0.953150969619124,0,20.1131324375943,0,0,0.899362287916574,0.274537029736055,0.235624804691373,0,0,0,1.46290121726877,0,0,0,0,0,0,0,0,0.578775534266688,1.9676842561399,0,0,0,0.286822704408103,6.09144054281351,0,0,0,0.329294892959902,2.65631221636001,2.44954304171488,0,0,0,4.89547764039252,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,180.490830461694,52.2657838265444,222.384348319844,0,0,0,0,0.211125408127993,0.796991953004279,0.276283915531148,11.5889064012967,0,0,0,0,0,0,2.17015492401254,0,0,0,0,0,0,0,0,0.341380344856499,0.254253650292766,2.6002644994473,0.344743373241465,0,0,0,0,0,0,0,0,0,0,1.15425387755696,0,0,18.0412865263642,11.7339161675769,200.332728311645,7.14461228534526,334.212804563684,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.619202951523374,12.8316330436061,0,0,0,0,44.1417706014334,0,0,0,0,0.789168805698781,3.62972148145992,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,5.76598005198699,0,0.290268993867255,0,0.0821154570532092,0.872901148395775,0.353024506766001,9.0392296312213,0,0,0,0.782205530939212,0,0.213452994739353,163.444260638183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95497680890578,0.916641696046735,4.30723814746088,3.59422200898184,6.43839072204856,1.56220020209311,4.56847612909739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,4.98318587282482,0,0,0,2.1440859791201,3.31045985182716,0,0,0,0,0,0,0,0,1.31897010310274,78.1790644582106,0,0,0,0,0.213574825135389,1.25763444079733,0.414239055347196,0.496166021811951,0,0,0.638341257770182,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,61.6042757581257,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0.168942440653073,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,3.88169321028054,0,4.6960144422566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.707818340086442,3.85200056895526,59.2646667351235,0,0,0,0.752103283492572,0,0,35.0954970605106,0,1.6264169483875,0.0675375846183947,0,0,0,0,0.548257766857182,6.94695649745012,0,0,0,0,0.606965604236632,0.227662191351298,18.0952835131783,0,1.02892805662451,0,0,0,0,0.78493092850514,0,3.64353812307926,27.3947616152849,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,1.69354820076372,8.47695413612985,0,0,0.111855431797792,0,0,25.8971534875158,6.36509402508732,144.976803917275,29.1426595835484,0,0,0,0,0,0.15096284356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|phase1_expression=2.18014055124668,2.14100523890983,1.26858963686374,5.00366491765652,5.36353313312745,27.0424942471114,0,0,0,0.982935746006035,6.97801167972428,50.6783983342,45.6316872335225,1.36142988256051,5.63375538737457,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,1.39334510984468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,1.02290049474824,0,0,0.144846518960824,0,6.32625331393427,0.0945348171640679,0,0,0.261958150995425,0,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,9.53151920241922,0,0,0.622422070799533,0,0.326923806226917,3.78393569112329,38.0276110156799,1.17160715916898,0,0,0,0.117434498643765,0,0.140450806702248,0,0.368502951935304,0,0,0,0,0.718618141816238,0.336672227908132,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.646584227275248,0,0,0,0,0,0,0,0.132529768321485,4.76395165765025,1.24393266018445,0.252320850875628,0,0,0,0,0,0,47.4410268159774,32.8740145652298,37.1156986020562,47.867584165859,37.6931438279863,41.9968995826641,45.3033195418152,33.5538705364342,38.8594628515854,5.90524363699719,4.20725321410337,2.4694440679884,23.5213938216867,0,0,4.72631925345123,0,0,0,0,0,0,6.20342582562148,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28680194292333,116.121023553769,1.64648067356154,0,2.48774364119782,3.16780749173372,0,0,0,0,0,0,0,1.14861935834114,0,9.55556624006023,21.7804901903406,4.83464600747718,0,0,0,0,0,0,2.31986643833309,0,0.637938751653163,0,0,0,6.01188309423785,6.5022167737758,2.44138521329762,0,0,0.157702415033935,0.117141414992713,0.601892199455438,0,9.31257641632544,0,0.553107505625109,0,46.6006754761323,110.492182467096,0,0,0,39.1034567165675,111.511744472033,119.746556158553,2.48107807818777,0.460385919864187,3.92924132206303,3.07533958213682,1.53512174720011,2.73451665944133,31.1677939534481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,0.510281115829547,0.215915916102139,6.16909010761157,0,1.00337954770971,0,0,0,0,0,0,0,0,5.66725564062472,0,0,0,0,0,5.60690166094307,4.1593126620954,5.98664331431905,7.44317491416465,0.859361958946189,10.2961852679102,5.28405089979826,34.8115259378743,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,1.48863347743867,0.949138274156178,0.953150969619124,0,20.1131324375943,0,0,0.899362287916574,0.274537029736055,0.235624804691373,0,0,0,1.46290121726877,0,0,0,0,0,0,0,0,0.578775534266688,1.9676842561399,0,0,0,0.286822704408103,6.09144054281351,0,0,0,0.329294892959902,2.65631221636001,2.44954304171488,0,0,0,4.89547764039252,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,180.490830461694,52.2657838265444,222.384348319844,0,0,0,0,0.211125408127993,0.796991953004279,0.276283915531148,11.5889064012967,0,0,0,0,0,0,2.17015492401254,0,0,0,0,0,0,0,0,0.341380344856499,0.254253650292766,2.6002644994473,0.344743373241465,0,0,0,0,0,0,0,0,0,0,1.15425387755696,0,0,18.0412865263642,11.7339161675769,200.332728311645,7.14461228534526,334.212804563684,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.619202951523374,12.8316330436061,0,0,0,0,44.1417706014334,0,0,0,0,0.789168805698781,3.62972148145992,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,5.76598005198699,0,0.290268993867255,0,0.0821154570532092,0.872901148395775,0.353024506766001,9.0392296312213,0,0,0,0.782205530939212,0,0.213452994739353,163.444260638183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95497680890578,0.916641696046735,4.30723814746088,3.59422200898184,6.43839072204856,1.56220020209311,4.56847612909739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,4.98318587282482,0,0,0,2.1440859791201,3.31045985182716,0,0,0,0,0,0,0,0,1.31897010310274,78.1790644582106,0,0,0,0,0.213574825135389,1.25763444079733,0.414239055347196,0.496166021811951,0,0,0.638341257770182,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,61.6042757581257,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0.168942440653073,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,3.88169321028054,0,4.6960144422566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.707818340086442,3.85200056895526,59.2646667351235,0,0,0,0.752103283492572,0,0,35.0954970605106,0,1.6264169483875,0.0675375846183947,0,0,0,0,0.548257766857182,6.94695649745012,0,0,0,0,0.606965604236632,0.227662191351298,18.0952835131783,0,1.02892805662451,0,0,0,0,0.78493092850514,0,3.64353812307926,27.3947616152849,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,1.69354820076372,8.47695413612985,0,0,0.111855431797792,0,0,25.8971534875158,6.36509402508732,144.976803917275,29.1426595835484,0,0,0,0,0,0.15096284356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| ||
|short_description=p5@H19 | |short_description=p5@H19 | ||
}} | }} |
Latest revision as of 06:50, 17 September 2015
Short description: | p5@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 0bp_to_ENST00000411861_5end |
EntrezGene: | NA |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.82e-16 | 19 |
cell of skeletal muscle | 3.93e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.01e-15 | 14 |
membranous layer | 1.01e-15 | 14 |
extraembryonic structure | 2.30e-15 | 24 |
larynx | 3.39e-14 | 9 |
upper respiratory tract | 7.75e-12 | 19 |
chorion | 1.40e-11 | 7 |
mesenchyme | 1.03e-09 | 160 |
entire embryonic mesenchyme | 1.03e-09 | 160 |
foregut | 9.57e-08 | 87 |
placenta | 2.51e-07 | 4 |
allantois | 2.51e-07 | 4 |
organ component layer | 4.14e-07 | 66 |
omentum | 4.43e-07 | 6 |
peritoneum | 4.43e-07 | 6 |
abdominal cavity | 4.43e-07 | 6 |
visceral peritoneum | 4.43e-07 | 6 |
trunk mesenchyme | 4.82e-07 | 122 |