FFCP PHASE1:Hg19::chr10:70188997..70189004,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:70188997..70189004,- | |||
|description=CAGE_peak_at_chr10:70188997..70189004,- | |description=CAGE_peak_at_chr10:70188997..70189004,- | ||
|id=chr10:70188997..70189004,- | |id=chr10:70188997..70189004,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002591;8.01e-18;1!CL:0000054;1.38e-09;2!CL:0000137;1.38e-09;2!CL:0000092;1.38e-09;2 | |ontology_enrichment_celltype_v019=CL:0002591;8.01e-18;1!CL:0000054;1.38e-09;2!CL:0000137;1.38e-09;2!CL:0000092;1.38e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002591,1.44e-17,1;CL:0000054,1.57e-09,2;CL:0000137,1.57e-09,2;CL:0000092,1.57e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.16e-07;11 | |ontology_enrichment_development_v019=UBERON:0004161;6.16e-07;11 | ||
|ontology_enrichment_disease=DOID:162!6.69e-17!235;DOID:14566!6.86e-16!239;DOID:2531!1.97e-11!51;DOID:0060083!1.97e-11!51;DOID:0050687!5.64e-10!143;DOID:0050686!1.39e-09!137;DOID:1240!1.36e-07!39;DOID:305!4.03e-07!106;DOID:0060058!5.07e-07!10 | |ontology_enrichment_disease=DOID:162!6.69e-17!235;DOID:14566!6.86e-16!239;DOID:2531!1.97e-11!51;DOID:0060083!1.97e-11!51;DOID:0050687!5.64e-10!143;DOID:0050686!1.39e-09!137;DOID:1240!1.36e-07!39;DOID:305!4.03e-07!106;DOID:0060058!5.07e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:201;5.67e-12;6!DOID:0060100;5.67e-12;6!DOID:4231;1.38e-09;2!DOID:200;1.38e-09;2!DOID:4305;1.38e-09;2!DOID:1907;1.38e-09;2 | |ontology_enrichment_disease_v019=DOID:201;5.67e-12;6!DOID:0060100;5.67e-12;6!DOID:4231;1.38e-09;2!DOID:200;1.38e-09;2!DOID:4305;1.38e-09;2!DOID:1907;1.38e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:201,7.08e-12,6;DOID:0060100,7.08e-12,6;DOID:200,1.57e-09,2;DOID:4305,1.57e-09,2;DOID:4231,1.71e-09,2;DOID:1907,1.71e-09,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002038;8.01e-18;1!UBERON:0009661;8.01e-18;1!UBERON:0002950;8.01e-18;1!UBERON:0001891;8.01e-18;1!UBERON:0000078;1.38e-09;2!UBERON:0002012;1.38e-09;2!UBERON:0008886;1.38e-09;2 | |ontology_enrichment_uberon_v019=UBERON:0002038;8.01e-18;1!UBERON:0009661;8.01e-18;1!UBERON:0002950;8.01e-18;1!UBERON:0001891;8.01e-18;1!UBERON:0000078;1.38e-09;2!UBERON:0002012;1.38e-09;2!UBERON:0008886;1.38e-09;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,4.44e-18,1;UBERON:0009661,4.44e-18,1;UBERON:0002950,4.44e-18,1;UBERON:0001891,4.44e-18,1;UBERON:0009616,4.44e-18,1;UBERON:0010286,4.44e-18,1;UBERON:0000078,1.86e-09,2;UBERON:0007497,1.86e-09,2;UBERON:0003643,1.86e-09,2;UBERON:0003504,1.86e-09,2;UBERON:0003469,1.86e-09,2;UBERON:0003496,1.86e-09,2;UBERON:0002012,1.86e-09,2;UBERON:0008886,1.86e-09,2;UBERON:0007303,1.86e-09,2;UBERON:0002061,1.86e-09,2;UBERON:0005432,1.86e-09,2;UBERON:0004363,1.86e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.251085279189606,0.534893840235659,0.410502947249729,0.629686250509434,0,0,0,0,0,0,0.852139206383318,0.142169232487422,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0.221533894583621,0,0.25618263945135,0.780356085359269,0.657751618414705,0,0,0,0.267540828089713,0,0.339928028092699,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0.361439152384566,0,0,0,0,0.283604451492204,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0.506328996723799,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,2.20731549707325,0.245976877086227,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0.448340575974109,0.197030760201927,0.431255149719035,0.128343036279748,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.246381468041427,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0.784306353074702,0,0,0,0,0.27470839445503,0.247528499761764,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0.145016693914229,0.255679882248303,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0.185803175125719,0.721346064882224,1.92082977040718,0.478278818186467,0.199579371432817,0,0.635020748171649,0,0.561594356226918,0.228234679033192,0,2.50634477090067,0.169291777801603,0.802940375518498,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0.33307196799782,0,0.18714054040822,0.146508179271894,0,0.445773537109913,0,0,0,0,0,0,0,0.329607748453519,1.05562704063997,0.19924798825107,0,0.503865495708552,0.102268682502155,0.615424027305347,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0.262379999988587,0,0.341380344856499,0,0.236387681767936,1.37897349296586,0.291604613383254,0.694499979733169,0,0,0,0.331737779793674,0,0,0.21787692703798,0,0,0.113942055847001,0,0.0897576444097721,0.108647371922008,0,0,0,0,0.156980256395025,0,0.225595660617181,0.19606253431774,0.167821586975843,0.569261198172555,0.476809736941136,0,0,0.848118428603645,0.216388639742091,0,0.176915129006678,0,0.296521128680622,0.247127877893006,0.313265848516366,0,0,0,0,0.391329237864179,0.242780379534093,0,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0.277349346026277,0.173559738335131,0.0979923974143777,0.522355239482415,0,0,0.19351266257817,0.292357268344742,0.410577285266046,0,0.176512253383001,0.225980740780532,0.274083849293502,0,0.126621591911757,0.195551382734803,0,0,0,0,0,0.171594997861965,0,0,0.471388069233591,0.271808412147228,0.104602846312333,0,0,0,0.547621515567972,0,0,0.525774708558629,0,0,0,0,0,0,0.134366944973453,0,1.16495949527454,0.157566364614447,0.0824158583811665,0.13480708770837,0.196854963029498,0.169346664131569,0,0.681017030557878,0.321506296930038,0.550157746388935,0.415440338029185,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0.129282956361551,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0.365377795142688,0,0,0,0,0,0,0,0.244052529803926,0.3755727921195,0,0.443716206147409,0.0620964029413835,0.276697269872462,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0.506827321959218,0,0,0,0.691292180758654,0.194860308839388,0,0,0,0,0,0.19998739585493,0.640150378164845,0,1.13503190713367,0,0,0,0.639471856518258,0.215649622793364,0,0.327628914576042,0.169732529954025,0.425149840203366,0.371807292777007,0,0,0.394308725006267,0.80057074828547,0.705351887381368,0,0.128458450192919,1.41696576325585,0.638535436228605,0,0.504143392443436,0.0691572524642179,0,0,0,0.235939446695481,0,0.231051332300676,1.1441462864015,0,0.198916222116275,0.0752103283492573,0.20170506870352,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0.336283722218824,0,0,0,0.230467975111559,0,0,0.131545547125698,0,0.667388411352415,0,0,0,0,0,0,0,0.47404083519818,0.464965701472501,0,0,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| ||
|short_description=p@chr10:70188997..70189004,- | |short_description=p@chr10:70188997..70189004,- | ||
}} | }} |
Latest revision as of 14:57, 23 July 2015
Short description: | p@chr10:70188997..70189004, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:70188997..70189004, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 1.44e-17 | 1 |
bone matrix secreting cell | 1.57e-09 | 2 |
osteocyte | 1.57e-09 | 2 |
osteoclast | 1.57e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 4.44e-18 | 1 |
midbrain nucleus | 4.44e-18 | 1 |
regional part of midbrain | 4.44e-18 | 1 |
midbrain | 4.44e-18 | 1 |
presumptive midbrain | 4.44e-18 | 1 |
midbrain neural tube | 4.44e-18 | 1 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.86e-09 | 2 |
developing epithelial placode | 1.86e-09 | 2 |
respiratory system arterial blood vessel | 1.86e-09 | 2 |
respiratory system blood vessel | 1.86e-09 | 2 |
respiratory system artery | 1.86e-09 | 2 |
head blood vessel | 1.86e-09 | 2 |
pulmonary artery | 1.86e-09 | 2 |
pulmonary vascular system | 1.86e-09 | 2 |
pharyngeal vasculature | 1.86e-09 | 2 |
truncus arteriosus | 1.86e-09 | 2 |
aortic sac | 1.86e-09 | 2 |
pharyngeal arch artery | 1.86e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
connective tissue cancer | 7.08e-12 | 6 |
musculoskeletal system cancer | 7.08e-12 | 6 |
giant cell tumor | 1.57e-09 | 2 |
bone giant cell tumor | 1.57e-09 | 2 |
histiocytoma | 1.71e-09 | 2 |
malignant fibroxanthoma | 1.71e-09 | 2 |