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MacroAPE 1083:CNhs12008 bl f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;16.524527848907805;82.45397302349713;217.1959378595316;66.93521502332672!2;6.812310405557353;226.88742379380741;13.849790986767964;135.56012...")
 
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;0.000204146!12176-128I7;0.000213543!12177-128I8;4.34229e-05!12182-129A4;0.000115535!12183-129A5;0.00018128!12184-129A6;0.000236001!10809-111A8;0.000341816!10597-108E3;2.08057e-08!10717-109I6;0.119484!10455-106G5;1.99134e-11!10534-107G3;0.003727!10429-106D6;0.00130876!10464-106H5;0.0400107!10827-111C8;0.020508!10789-110H6;0.0120926!10828-111C9;0.0333695!10788-110H5;0.259392!10792-110H9;0.000543149!10765-110E9;0.307807!10829-111D1;0.00470138!10830-111D2;0.0202361!10831-111D3;0.174898!10832-111D4;0.00930403!10833-111D5;0.00150845!10764-110E8;0.00215605!10770-110F5;0.064226!10399-106A3;0.382047!10400-106A4;0.000126343!10405-106A9;0.00111137!10834-111D6;0.00101709!10835-111D7;0.0578615!10836-111D8;3.2524e-05!10837-111D9;0.00153417!10699-109G6;0.00984731!10802-111A1;0.0128919!10796-110I4;0.00731051!10010-101C1;3.70971e-06!10810-111A9;5.66846e-05!10421-106C7;2.74958e-05!10708-109H6;0.0169284!12235-129G3;4.69972e-08!12236-129G4;0.726863!12237-129G5;0.257594!10167-103B5;0.808202!10151-102I7;0.000206632!10428-106D5;0.00015197!10795-110I3;0.419939!10805-111A4;3.43188e-05!10052-101G7;0.000948425!10189-103D9;0.000137132!10589-108D4;4.2298e-06!10425-106D2;0.0660298!10427-106D4;0.0263631!10702-109G9;0.0405683!10432-106D9;0.155415!10496-107C1;5.63303e-07!10718-109I7;0.000690233!10011-101C2;0.000559657!10053-101G8;9.37653e-05!10686-109F2;0.00368277!10084-102B3;0.333714!10012-101C3;5.06439e-05!10085-102B4;3.30132e-06!10482-107A5;0.0286423!10419-106C5;0.000705154!10080-102A8;5.65216e-05!10760-110E4;0.0264074!10709-109H7;9.99196e-07!10710-109H8;3.56413e-07!10703-109H1;2.43998e-06!10719-109I8;0.0328312!10642-109A3;0.0843233!10177-103C6;0.110174!10164-103B2;3.00801e-05!10173-103C2;0.000318011!10166-103B4;0.0210065!10083-102B2;0.0143547!10188-103D8;0.00498317!10552-107I3;2.92481e-05!10553-107I4;1.06499e-14!10013-101C4;0.00857082!10536-107G5;0.000138223!10618-108G6;0.00566735!10423-106C9;0.000171432!10785-110H2;6.17387e-06!12238-129G6;3.75335e-05!12239-129G7;0.092176!12240-129G8;0.270425!10416-106C2;0.195409!10801-110I9;0.260925!10766-110F1;0.00133347!10824-111C5;0.0248641!10825-111C6;1.33525e-06!10826-111C7;9.19893e-07!10454-106G4;1.40089e-06!10409-106B4;0.000133791!10638-108I8;0.012738!10636-108I6;4.982e-15!10513-107D9;3.45729e-08!10420-106C6;0.000304791!10082-102B1;0.00481803!10014-101C5;0.000152286!10070-101I7;1.84532e-05!10452-106G2;7.35928e-05!10453-106G3;0.00932788!10449-106F8;0.00164147!10042-101F6;0.0033937!10069-101I6;1.22325e-07!10193-103E4;0.00026768!10631-108I1;2.09176e-06!10438-106E6;0.013688!10488-107B2;0.0215437!10196-103E7;1.31696e-07!10071-101I8;0.000321063!10071-101I8;1.05545e-05!10041-101F5;0.0183933!10451-106G1;9.38097e-07!10450-106F9;0.0135148!10604-108F1;0.0236885!10605-108F2;3.27207e-05!10606-108F3;3.25986e-09!10603-108E9;2.57072e-05!10497-107C2;9.85914e-06!10448-106F7;1.29787e-05!10643-109A4;0.000744167!10426-106D3;1.05252e-06!10431-106D8;2.02479e-07!10197-103E8;5.16095e-10!10443-106F2;5.08805e-05!10815-111B5;8.19237e-06!10816-111B6;3.39915e-11!10817-111B7;5.52317e-12!10015-101C6;9.55399e-13!10410-106B5;0.000470609!10054-101G9;0.00856027!10758-110E2;2.01774e-05!10711-109H9;0.00441024!10040-101F4;2.73257e-08!10470-106I2;0.000171717!10415-106C1;1.28443e-05!10198-103E9;4.27315e-05!10614-108G2;0.000722392!10612-108F9;0.013029!10549-107H9;0.000205469!10615-108G3;0.000225309!10487-107B1;0.0108028!10433-106E1;5.72507e-11!10688-109F4;0.000142744!10444-106F3;0.000275028!10444-106F3;0.18504!10485-107A8;0.187757!10413-106B8;8.52379e-06!10175-103C4;0.000149851!10161-103A8;1.30541e-05!12131-128D7;6.29177e-06!10624-108H3;0.269397!10712-109I1;0.790857!10205-103F7;0.16863!10206-103F8;1.12883e-06!10207-103F9;4.13727e-06!10050-101G5;0.00139083!10051-101G6;0.0202024!10016-101C7;0.000945044!10046-101G1;0.000372304!10778-110G4;0.000128263!10633-108I3;0.413957!10818-111B8;0.0741208!10819-111B9;3.45012e-07!10820-111C1;8.06494e-08!10484-107A7;5.61556e-07!10808-111A7;1.44062e-06!10169-103B7;0.0066972!10153-102I9;0.000212437!13425-144D5;6.89307e-05!13433-144E4;0.024928!13437-144E8;0.0215424!11904-125F5;0.0188652!11905-125F6;0.993408!10039-101F3;0.824847!10791-110H8;0.000138113!10017-101C8;1.99415e-05!10045-101F9;0.0111786!10509-107D5;0.021449!10839-111E2;0.00156632!10692-109F8;0.000421066!10079-102A7;1.18604e-05!10078-102A6;0.000152633!10721-110A1;0.00437624!10569-108B2;5.70807e-07!10570-108B3;0.066271!10571-108B4;0.0407435!10647-109A8;0.00363717!10752-110D5;0.000694331!10782-110G8;0.00182258!10726-110A6;0.361901!10018-101C9;1.51798e-07!10086-102B5;0.341998!10182-103D2;0.600471!10165-103B3;1.10149e-05!10499-107C4;4.05665e-06!10408-106B3;8.53989e-08!10019-101D1;0.00219312!10068-101I5;8.57364e-05!10075-102A3;3.13708e-07!10077-102A5;0.000152082!10727-110A7;0.000163322!10775-110G1;0.0228273!10412-106B7;0.106947!12231-129F8;0.0242637!12232-129F9;0.164912!12233-129G1;0.0302763!12234-129G2;0.0161628!10414-106B9;0.288152!10170-103B8;0.00299745!10183-103D3;0.000526252!10150-102I6;0.000134172!10174-103C3;4.90062e-05!10155-103A2;9.25122e-09!10038-101F2;5.38032e-08!10838-111E1;5.75396e-08!10759-110E3;0.00646761!10514-107E1;6.41169e-05!10465-106H6;1.17382e-05!10691-109F7;1.31565e-05!10843-111E6;0.00224918!10844-111E7;0.123746!11747-123G1;0.320412!11748-123G2;0.0918951!11749-123G3;0.116096!11750-123G4;0.838279!11751-123G5;0.588395!11840-124H4;0.363415!11752-123G6;0.105915!11753-123G7;0.968144!11754-123G8;0.79191!11755-123G9;0.416164!11756-123H1;0.158042!11833-124G6;0.406382!11760-123H5;0.430499!11836-124G9;0.428063!11758-123H3;0.471351!11835-124G8;0.7857!11762-123H7;0.306977!11838-124H2;0.336705!11757-123H2;0.17909!11759-123H4;0.97934!11761-123H6;0.386516!11842-124H6;0.867931!11837-124H1;0.487925!10568-108B1;0.517837!13230-141I8;0.147093!13231-141I9;0.69043!10696-109G3;0.948338!10493-107B7;0.622015!10494-107B8;1.73147e-06!10850-111F4;2.97722e-05!10851-111F5;3.4665e-05!10852-111F6;7.95369e-11!10853-111F7;0.0201082!10854-111F8;3.16121e-10!10855-111F9;0.000293594!10856-111G1;0.0586309!10847-111F1;5.70817e-08!10846-111E9;0.0098219!10848-111F2;2.60043e-07!10845-111E8;1.87957e-07!10857-111G2;2.84948e-08!10858-111G3;4.74364e-05!10156-103A3;4.06151e-05!11901-125F2;0.00011868!11902-125F3;0.564411!11903-125F4;0.254043!10689-109F5;0.272899!10648-109A9;1.68837e-09!10784-110H1;9.23943e-06!10744-110C6;1.18365e-06!10772-110F7;0.708824!10474-106I6;0.00211383!10600-108E6;0.94842!10684-109E9;0.00104234!12226-129F3;0.00229058!12227-129F4;0.000313751!10508-107D4;0.00589008!10539-107G8;0.522868!10607-108F4;0.300839!10555-107I6;0.0386157!10774-110F9;0.286064!10637-108I7;0.000250597!10663-109C6;0.0252773!10728-110A8;0.00530937!10729-110A9;0.00743155!10430-106D7;0.775838!10730-110B1;0.0191086!10813-111B3;0.582512!10812-111B2;0.69929!10037-101F1;0.658691!10172-103C1;7.99583e-05!10163-103B1;0.000330828!10076-102A4;4.67481e-05!10073-102A1;0.000112654!10036-101E9;0.0703198!10195-103E6;0.000182473!10277-104E7;5.39925e-05!10434-106E2;2.14317e-05!10550-107I1;0.00010048!10545-107H5;1.9782e-07!10544-107H4;7.14528e-05!10704-109H2;7.1247e-05!10510-107D6;0.0797217!10558-107I9;0.0752601!10020-101D2;0.00221488!10732-110B3;0.0149449!10049-101G4;0.000134437!10698-109G5;0.0129168!10437-106E5;0.000196512!10417-106C3;0.00014567!10035-101E8;6.72608e-07!10171-103B9;0.000171457!10157-103A4;0.000159642!10034-101E7;0.000111589!10072-101I9;0.000160577!10199-103F1;0.0723343!10200-103F2;0.00110238!10697-109G4;2.78494e-05!10723-110A3;0.00394817!10179-103C8;0.0183521!10160-103A7;0.000520518!10180-103C9;0.00341364!10162-103A9;2.92851e-05!10021-101D3;0.000381724!10840-111E3;0.000852719!10706-109H4;0.111299!10033-101E6;0.0225204!10032-101E5;1.9452e-06!10490-107B4;0.000132709!10439-106E7;8.48708e-10!10022-101D4;3.46824e-10!10176-103C5;4.94026e-05!10469-106I1;0.00131023!10067-101I4;0.00190336!10411-106B6;0.000480983!10471-106I3;0.0191519!10030-101E3;3.42964e-06!10475-106I7;0.000139148!10787-110H4;0.00128677!10477-106I9;0.000502465!10695-109G2;0.023119!11771-123I7;0.536567!11772-123I8;0.000566496!11773-123I9;0.103732!10093-102C3;0.584272!10442-106F1;0.000336969!10442-106F1;0.000592!10201-103F3;0.00163665!10639-108I9;8.99527e-05!11843-124H7;0.0515057!11841-124H5;2.08843e-06!10693-109F9;5.30377e-09!10436-106E4;0.00169048!10483-107A6;0.00578395!10282-104F3;0.00510109!10023-101D5;0.00779043!10066-101I3;0.00206318!10065-101I2;0.0018989!10800-110I8;0.000294896!10610-108F7;0.192808!10841-111E4;0.00140048!10541-107H1;0.00670698!10842-111E5;0.0625564!10562-108A4;0.0755705!10024-101D6;0.410194!10064-101I1;7.09246e-06!10609-108F6;0.000327723!10048-101G3;0.860765!10781-110G7;0.000727876!10181-103D1;0.799489!10159-103A6;6.29287e-07!10056-101H2;1.84471e-07!10737-110B8;5.55687e-06!10025-101D7;0.384109!10044-101F8;0.00111897!10424-106D1;0.00306356!10463-106H4;0.024038!10616-108G4;2.54101e-06!10486-107A9;0.000350708!10062-101H8;8.23065e-07!10202-103F4;1.49114e-06!10158-103A5;1.9749e-05!10441-106E9;1.47185e-08!10031-101E4;0.00558066!10063-101H9;7.42373e-05!10063-101H9;0.0663962!11763-123H8;1.64488e-07!11765-123I1;0.369897!11768-123I4;0.277822!10807-111A6;0.467857!10790-110H7;0.0164824!10798-110I6;0.0138167!10786-110H3;0.00439576!10591-108D6;0.00533301!10593-108D8;0.000713742!10590-108D5;0.00873942!10026-101D8;3.47989e-05!10096-102C6;0.0249247!10168-103B6;0.800904!10154-103A1;9.99923e-07!10209-103G2;1.17579e-06!10061-101H7;0.000676097!10027-101D9;4.89563e-05!10043-101F7;0.0381366!10783-110G9;2.12488e-06!10028-101E1;0.0130011!10060-101H6;0.00161912!10203-103F5;0.000154968!10059-101H5;0.00140253!10047-101G2;0.00808743!10029-101E2;9.04539e-05!10058-101H4;0.00195998!10418-106C4;6.29051e-05!10492-107B6;3.80258e-05!10694-109G1;4.54858e-07!10797-110I5;0.0983407!10057-101H3;2.95995e-05!10100-102D1;0.00306398!10055-101H1;0.000174273!10204-103F6;0.00383006!10191-103E2;0.00655781!10563-108A5;1.82652e-05
|name=CNhs12008_bl_f1
|name=CNhs12008_bl_f1
|tomtom_result=Myf#MA0055.1;2;1.83033e-05;0.00871238;0.017402;10;GCTGCTGCCCTT;CAGCAGCTGCTG;-!NHLH1#MA0048.1;2;0.000270046;0.128542;0.100184;10;GCTGCTGCCCTT;GCGCAGCTGCGT;+!SOK2#MA0385.1;-1;0.00185524;0.883095;0.42977;11;GCTGCTGCCCTT;TGCCTGCAGGT;-!PHD1#MA0355.1;-2;0.00226015;1.07583;0.42977;10;GCTGCTGCCCTT;TGCTGCAGGT;-!Mafb#MA0117.1;-3;0.00716623;3.41112;0.939217;8;GCTGCTGCCCTT;GCTGACGG;+!RTG3#MA0376.1;6;0.00790293;3.76179;0.939217;12;GCTGCTGCCCTT;ATATTAGCACGTGCTTAGTC;+!GCR2#MA0305.1;-3;0.0122967;5.85323;0.998691;7;GCTGCTGCCCTT;GCTTCCT;+!odd#MA0454.1;-1;0.0126574;6.0249;0.998691;11;GCTGCTGCCCTT;CTGCTACTGTT;-!ACE2#MA0267.1;-2;0.0154807;7.3688;0.998691;7;GCTGCTGCCCTT;TGCTGGT;-!abi4#MA0123.1;-2;0.0186716;8.88766;0.998691;10;GCTGCTGCCCTT;CGGTGCCCCC;+!Spz1#MA0111.1;0;0.0193143;9.19362;0.998691;11;GCTGCTGCCCTT;GCTGTTACCCT;-
}}
}}

Latest revision as of 13:52, 7 September 2012

Full Name: CNhs12008_bl_f1

Motif matrix
POACGT
116.52452784890780582.45397302349713217.195937859531666.93521502332672
26.812310405557353226.8874237938074113.849790986767964135.56012856913068
3134.9202152683628248.1257984788318152.25971088214905147.80392912591978
412.07630841744568100.78430207327322198.2751878210983471.973855443446
50.0380.33029202221830.02.77936173304499
60.00.00.0383.1096537552633
70.00.0383.10965375526330.0
80.0358.893806769497870.024.215846985765232
941.746647524743686193.324309912950470.7461372405494173147.29255907701977
1052.21937627429993131.9869864431024767.95610706333872130.9471839745222
1112.05446023888754387.84193527363878126.80767549507055156.40558274766653
1215.253616669046268103.53337249849729112.38092100365739151.9417435840624

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Myf#MA0055.121.83033e-050.008712380.01740210GCTGCTGCCCTTCAGCAGCTGCTG-
NHLH1#MA0048.120.0002700460.1285420.10018410GCTGCTGCCCTTGCGCAGCTGCGT+
SOK2#MA0385.1-10.001855240.8830950.4297711GCTGCTGCCCTTTGCCTGCAGGT-
PHD1#MA0355.1-20.002260151.075830.4297710GCTGCTGCCCTTTGCTGCAGGT-
Mafb#MA0117.1-30.007166233.411120.9392178GCTGCTGCCCTTGCTGACGG+
RTG3#MA0376.160.007902933.761790.93921712GCTGCTGCCCTTATATTAGCACGTGCTTAGTC+
GCR2#MA0305.1-30.01229675.853230.9986917GCTGCTGCCCTTGCTTCCT+
odd#MA0454.1-10.01265746.02490.99869111GCTGCTGCCCTTCTGCTACTGTT-
ACE2#MA0267.1-20.01548077.36880.9986917GCTGCTGCCCTTTGCTGGT-
abi4#MA0123.1-20.01867168.887660.99869110GCTGCTGCCCTTCGGTGCCCCC+
Spz1#MA0111.100.01931439.193620.99869111GCTGCTGCCCTTGCTGTTACCCT-
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