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MacroAPE 1083:CNhs11287 bu f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;750.3463775485915;149.51649877011278;606.3227710274678;390.7048519944694!2;3.1620351696831674;2.121280721359997;1468.9026768704607;422.70450...")
 
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!10464-106H5;0.122011!10827-111C8;0.209361!10789-110H6;0.0636043!10828-111C9;0.0850655!10788-110H5;0.10035!10792-110H9;0.150448!10765-110E9;0.0307718!10829-111D1;0.0750924!10830-111D2;0.0660445!10831-111D3;0.0689999!10832-111D4;0.0726345!10833-111D5;0.0926456!10764-110E8;0.106182!10770-110F5;0.173283!10399-106A3;0.270974!10400-106A4;0.094849!10405-106A9;0.131133!10834-111D6;0.101714!10835-111D7;0.0788664!10836-111D8;0.17345!10837-111D9;0.480782!10699-109G6;0.15376!10802-111A1;0.115422!10796-110I4;0.187287!10010-101C1;0.292291!10810-111A9;0.0964212!10421-106C7;0.251597!10708-109H6;0.132168!12235-129G3;0.0892757!12236-129G4;0.952615!12237-129G5;0.038222!10167-103B5;0.991051!10151-102I7;0.00523307!10428-106D5;0.00552016!10795-110I3;0.23953!10805-111A4;0.0810674!10052-101G7;0.672259!10189-103D9;0.0969216!10589-108D4;0.0262738!10425-106D2;0.985286!10427-106D4;0.952887!10702-109G9;0.103099!10432-106D9;0.605197!10496-107C1;0.110776!10718-109I7;0.281804!10011-101C2;0.137173!10053-101G8;0.0581378!10686-109F2;0.462702!10084-102B3;0.103992!10012-101C3;0.00436661!10085-102B4;0.00416415!10482-107A5;0.00174756!10419-106C5;0.95521!10080-102A8;0.885708!10760-110E4;0.0250368!10709-109H7;0.419376!10710-109H8;0.389841!10703-109H1;0.323275!10719-109I8;0.593703!10642-109A3;0.855395!10177-103C6;0.27698!10164-103B2;0.00833356!10173-103C2;0.00662094!10166-103B4;0.0039058!10083-102B2;0.001963!10188-103D8;0.00191235!10552-107I3;0.00279189!10553-107I4;0.0440105!10013-101C4;0.428952!10536-107G5;0.0725146!10618-108G6;0.0958686!10423-106C9;0.690327!10785-110H2;0.327317!12238-129G6;0.74935!12239-129G7;0.35633!12240-129G8;0.38053!10416-106C2;0.319954!10801-110I9;0.0679289!10766-110F1;0.0762574!10824-111C5;0.0490879!10825-111C6;0.188704!10826-111C7;0.195233!10454-106G4;0.199694!10409-106B4;0.0836966!10638-108I8;0.0989096!10636-108I6;0.0700883!10513-107D9;0.0568771!10420-106C6;0.352044!10082-102B1;0.283887!10014-101C5;0.0102888!10070-101I7;0.0421007!10452-106G2;0.0286813!10453-106G3;0.376524!10449-106F8;0.231564!10042-101F6;0.271972!10069-101I6;0.00821998!10193-103E4;0.0989784!10631-108I1;0.00736776!10438-106E6;0.0539328!10488-107B2;0.58385!10196-103E7;0.14045!10071-101I8;0.0515659!10071-101I8;0.0407598!10041-101F5;0.0171992!10451-106G1;0.0655463!10450-106F9;0.442074!10604-108F1;0.382313!10605-108F2;0.628669!10606-108F3;0.39986!10603-108E9;0.444136!10497-107C2;0.627585!10448-106F7;0.114921!10643-109A4;0.0403615!10426-106D3;0.427217!10431-106D8;0.627507!10197-103E8;0.181457!10443-106F2;0.0669753!10815-111B5;0.0072354!10816-111B6;0.152449!10817-111B7;0.19321!10015-101C6;0.160821!10410-106B5;0.035443!10054-101G9;0.188811!10758-110E2;0.00738384!10711-109H9;0.00666418!10040-101F4;0.0662183!10470-106I2;0.00544627!10415-106C1;0.584807!10198-103E9;0.115975!10614-108G2;0.0422855!10612-108F9;0.811617!10549-107H9;0.213765!10615-108G3;0.237625!10487-107B1;0.950782!10433-106E1;0.165529!10688-109F4;0.3571!10444-106F3;0.621166!10444-106F3;0.143945!10485-107A8;0.170689!10413-106B8;0.145149!10175-103C4;0.0793738!10161-103A8;0.00566451!12131-128D7;0.00653013!10624-108H3;0.726192!10712-109I1;0.0333726!10205-103F7;0.121754!10206-103F8;0.0858968!10207-103F9;0.0895502!10050-101G5;0.0671873!10051-101G6;0.0261345!10016-101C7;0.105533!10046-101G1;0.122804!10778-110G4;0.0594258!10633-108I3;0.687254!10818-111B8;0.788606!10819-111B9;0.165664!10820-111C1;0.17987!10484-107A7;0.185476!10808-111A7;0.388451!10169-103B7;0.049424!10153-102I9;0.00392058!13425-144D5;0.00472086!13433-144E4;0.476588!13437-144E8;0.399164!11904-125F5;0.28655!11905-125F6;0.870485!10039-101F3;0.760046!10791-110H8;0.00561744!10017-101C8;0.727154!10045-101F9;0.0138776!10509-107D5;0.00964198!10839-111E2;0.187973!10692-109F8;0.191153!10079-102A7;0.370808!10078-102A6;0.160884!10721-110A1;0.266597!10569-108B2;0.263126!10570-108B3;0.838643!10571-108B4;0.874676!10647-109A8;0.755735!10752-110D5;0.311263!10782-110G8;0.316847!10726-110A6;0.329128!10018-101C9;0.227322!10086-102B5;0.231468!10182-103D2;0.148822!10165-103B3;0.00572824!10499-107C4;0.00709462!10408-106B3;0.0537086!10019-101D1;0.569023!10068-101I5;0.118001!10075-102A3;0.0385467!10077-102A5;0.129245!10727-110A7;0.631121!10775-110G1;0.100623!10412-106B7;0.0657741!12231-129F8;0.693435!12232-129F9;0.247698!12233-129G1;0.159528!12234-129G2;0.379592!10414-106B9;0.614822!10170-103B8;0.418253!10183-103D3;0.00669835!10150-102I6;0.0094025!10174-103C3;0.00447654!10155-103A2;0.0144642!10038-101F2;0.00813021!10838-111E1;0.00593182!10759-110E3;0.923922!10514-107E1;0.359939!10465-106H6;0.107736!10691-109F7;0.220804!10843-111E6;0.410836!10844-111E7;0.728159!11747-123G1;0.103281!11748-123G2;0.324482!11749-123G3;0.167831!11750-123G4;0.325374!11751-123G5;0.387334!11840-124H4;0.739937!11752-123G6;0.895869!11753-123G7;0.223855!11754-123G8;0.359095!11755-123G9;0.381148!11756-123H1;0.287227!11833-124G6;0.182537!11760-123H5;0.407779!11836-124G9;0.462437!11758-123H3;0.524828!11835-124G8;0.437203!11762-123H7;0.831721!11838-124H2;0.865928!11757-123H2;0.981748!11759-123H4;0.114486!11761-123H6;0.496069!11842-124H6;0.356688!11837-124H1;0.272548!10568-108B1;0.851648!13230-141I8;0.0275783!13231-141I9;0.852968!10696-109G3;0.9673!10493-107B7;0.443374!10494-107B8;0.17128!10850-111F4;0.513048!10851-111F5;0.170233!10852-111F6;0.0364227!10853-111F7;0.421543!10854-111F8;0.0174081!10855-111F9;0.307463!10856-111G1;0.678278!10847-111F1;0.253996!10846-111E9;0.18388!10848-111F2;0.274559!10845-111E8;0.0360823!10857-111G2;0.112554!10858-111G3;0.0118557!10156-103A3;0.0118558!11901-125F2;0.00496549!11902-125F3;0.752257!11903-125F4;0.827517!10689-109F5;0.73249!10648-109A9;0.0275176!10784-110H1;0.0314949!10744-110C6;0.329683!10772-110F7;0.152607!10474-106I6;0.256464!10600-108E6;0.0333876!10684-109E9;0.13506!12226-129F3;0.248521!12227-129F4;0.3536!10508-107D4;0.0182917!10539-107G8;0.639772!10607-108F4;0.308175!10555-107I6;0.644183!10774-110F9;0.486255!10637-108I7;0.163396!10663-109C6;0.61298!10728-110A8;0.952177!10729-110A9;0.683713!10430-106D7;0.982503!10730-110B1;0.295509!10813-111B3;0.616176!10812-111B2;0.487192!10037-101F1;0.849098!10172-103C1;0.00579224!10163-103B1;0.0258327!10076-102A4;0.00423891!10073-102A1;0.00584029!10036-101E9;0.018748!10195-103E6;0.00241569!10277-104E7;0.00941031!10434-106E2;0.00904485!10550-107I1;0.415213!10545-107H5;0.298595!10544-107H4;0.368451!10704-109H2;0.46567!10510-107D6;0.462969!10558-107I9;0.771417!10020-101D2;0.568641!10732-110B3;0.0550342!10049-101G4;0.122756!10698-109G5;0.503531!10437-106E5;0.486187!10417-106C3;0.0146237!10035-101E8;0.357654!10171-103B9;0.00476539!10157-103A4;0.0109078!10034-101E7;0.00456175!10072-101I9;0.00391401!10199-103F1;0.0376841!10200-103F2;0.0218316!10697-109G4;0.0388397!10723-110A3;0.569238!10179-103C8;0.145144!10160-103A7;0.00631418!10180-103C9;0.00574436!10162-103A9;0.0396005!10021-101D3;0.0206495!10840-111E3;0.0217725!10706-109H4;0.0987689!10033-101E6;3.60778e-06!10032-101E5;0.00785468!10490-107B4;0.00303663!10439-106E7;0.0780679!10022-101D4;0.542494!10176-103C5;0.0248206!10469-106I1;0.00408163!10067-101I4;0.858254!10411-106B6;0.0184472!10471-106I3;0.281523!10030-101E3;0.0119295!10475-106I7;0.00339945!10787-110H4;0.762006!10477-106I9;0.567552!10695-109G2;0.984466!11771-123I7;0.366998!11772-123I8;0.0451882!11773-123I9;0.635006!10093-102C3;0.15741!10442-106F1;0.00263827!10442-106F1;0.00166679!10201-103F3;0.00213633!10639-108I9;0.062455!11843-124H7;0.809754!11841-124H5;0.287961!10693-109F9;0.0483652!10436-106E4;0.26275!10483-107A6;0.449384!10282-104F3;0.404817!10023-101D5;0.30408!10066-101I3;0.0762817!10065-101I2;0.0885569!10800-110I8;0.0647386!10610-108F7;0.833535!10841-111E4;0.403699!10541-107H1;0.353044!10842-111E5;0.356882!10562-108A4;0.946442!10024-101D6;0.348844!10064-101I1;0.0114644!10609-108F6;0.0343275!10048-101G3;0.907535!10781-110G7;0.0460151!10181-103D1;0.560574!10159-103A6;0.0130682!10056-101H2;0.0147627!10737-110B8;0.0182149!10025-101D7;0.566672!10044-101F8;0.207772!10424-106D1;0.0705955!10463-106H4;0.0616939!10616-108G4;0.512091!10486-107A9;0.233986!10062-101H8;0.207444!10202-103F4;0.0372636!10158-103A5;0.00795366!10441-106E9;0.0172689!10031-101E4;0.700956!10063-101H9;0.00244123!10063-101H9;0.0173766!11763-123H8;0.0289877!11765-123I1;0.8193!11768-123I4;0.686843!10807-111A6;0.78913!10790-110H7;0.288934!10798-110I6;0.585635!10786-110H3;0.11298!10591-108D6;0.488281!10593-108D8;0.408901!10590-108D5;0.749669!10026-101D8;0.201119!10096-102C6;0.0734559!10168-103B6;0.851102!10154-103A1;0.0132705!10209-103G2;0.00775025!10061-101H7;0.0513541!10027-101D9;0.0879277!10043-101F7;0.701687!10783-110G9;0.0837718!10028-101E1;0.00107132!10060-101H6;0.0264641!10203-103F5;0.0348875!10059-101H5;0.0461632!10047-101G2;0.0443244!10029-101E2;0.0229211!10058-101H4;0.0792415!10418-106C4;0.0709342!10492-107B6;0.80785!10694-109G1;0.080774!10797-110I5;0.496253!10057-101H3;0.455136!10100-102D1;0.100998!10055-101H1;0.0582763!10204-103F6;0.06341!10191-103E2;0.0117286!10563-108A5;0.0995166
|name=CNhs11287_bu_f1
|name=CNhs11287_bu_f1
|tomtom_result=kni#MA0451.1;1;0.0114854;5.46704;1;8;AGCTCAGG;GTGCTCTAGTTT;-!Tcfcp2l1#MA0145.1;2;0.0130608;6.21692;1;8;AGCTCAGG;CCAGTTCAAACCAG;+!YLR278C#MA0430.1;0;0.0147602;7.02588;1;8;AGCTCAGG;AACTCCGG;-!ECM23#MA0293.1;2;0.0154299;7.34463;1;8;AGCTCAGG;AAAGATCTAAA;+!GAT3#MA0301.1;0;0.0160834;7.65572;1;8;AGCTCAGG;AGATCTACA;+!CRZ1#MA0285.1;2;0.0193016;9.18758;1;7;AGCTCAGG;GTGGCTTAG;-
}}
}}

Latest revision as of 12:24, 7 September 2012

Full Name: CNhs11287_bu_f1

Motif matrix
POACGT
1750.3463775485915149.51649877011278606.3227710274678390.7048519944694
23.16203516968316742.1212807213599971468.9026768704607422.70450657913653
30.37738164807505871895.75835439641560.37738164807505870.3773816480750587
40.00.00.01896.8904993406409
51.84544681556008381891.35415889396061.84544681556008381.8454468155600838
6702.6990122876722464.8735194015511640.53054198708878688.7874256643292
7508.23763131628357129.6765602059601980.9386530440285278.0376547743694
8524.1181606159852408.3063817675544843.1209789487716121.3449780083289

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

kni#MA0451.110.01148545.4670418AGCTCAGGGTGCTCTAGTTT-
Tcfcp2l1#MA0145.120.01306086.2169218AGCTCAGGCCAGTTCAAACCAG+
YLR278C#MA0430.100.01476027.0258818AGCTCAGGAACTCCGG-
ECM23#MA0293.120.01542997.3446318AGCTCAGGAAAGATCTAAA+
GAT3#MA0301.100.01608347.6557218AGCTCAGGAGATCTACA+
CRZ1#MA0285.120.01930169.1875817AGCTCAGGGTGGCTTAG-