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MacroAPE 1083:Motif1068: Difference between revisions

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;0.852404!10788-110H5;0.973071!10792-110H9;0.921469!10765-110E9;0.994833!10829-111D1;0.876629!10830-111D2;0.853828!10831-111D3;0.708863!10832-111D4;0.666862!10833-111D5;0.871606!10764-110E8;0.775528!10770-110F5;0.533575!10399-106A3;0.79555!10400-106A4;0.893333!10405-106A9;0.99408!10834-111D6;0.939987!10835-111D7;0.716419!10836-111D8;0.921316!10837-111D9;0.90407!10699-109G6;0.731435!10802-111A1;0.556876!10796-110I4;0.833842!10010-101C1;0.0210329!10810-111A9;0.440985!10421-106C7;0.274192!10708-109H6;0.727134!12235-129G3;0.955401!12236-129G4;0.479714!12237-129G5;0.748589!10167-103B5;0.356198!10151-102I7;0.481176!10428-106D5;0.366137!10795-110I3;0.715316!10805-111A4;0.513056!10052-101G7;0.410149!10189-103D9;0.907776!10589-108D4;0.741704!10425-106D2;0.56261!10427-106D4;0.293166!10702-109G9;0.939106!10432-106D9;0.698583!10496-107C1;0.0132248!10718-109I7;0.0983658!10011-101C2;0.961688!10053-101G8;0.493951!10686-109F2;0.732796!10084-102B3;0.259153!10012-101C3;0.312338!10085-102B4;0.378453!10482-107A5;0.410254!10419-106C5;0.279328!10080-102A8;0.396837!10760-110E4;0.385194!10709-109H7;0.191931!10710-109H8;0.236896!10703-109H1;0.129532!10719-109I8;0.331764!10642-109A3;0.699312!10177-103C6;0.515668!10164-103B2;0.485725!10173-103C2;0.359572!10166-103B4;0.39634!10083-102B2;0.235919!10188-103D8;0.237765!10552-107I3;0.464331!10553-107I4;0.260791!10013-101C4;0.858765!10536-107G5;0.817477!10618-108G6;0.416974!10423-106C9;0.97041!10785-110H2;0.503359!12238-129G6;0.314449!12239-129G7;0.430567!12240-129G8;0.487038!10416-106C2;0.507871!10801-110I9;0.760995!10766-110F1;0.406014!10824-111C5;0.833522!10825-111C6;0.733107!10826-111C7;0.882868!10454-106G4;0.778701!10409-106B4;0.793582!10638-108I8;0.86672!10636-108I6;0.551091!10513-107D9;0.0592611!10420-106C6;0.171092!10082-102B1;0.473472!10014-101C5;0.864987!10070-101I7;0.808845!10452-106G2;0.830268!10453-106G3;0.871968!10449-106F8;0.591536!10042-101F6;0.65819!10069-101I6;0.372927!10193-103E4;0.519767!10631-108I1;0.432827!10438-106E6;0.99452!10488-107B2;0.461526!10196-103E7;0.398692!10071-101I8;0.399385!10071-101I8;0.976727!10041-101F5;0.316761!10451-106G1;0.969596!10450-106F9;0.927848!10604-108F1;0.783606!10605-108F2;0.843995!10606-108F3;0.505886!10603-108E9;0.886716!10497-107C2;0.700036!10448-106F7;0.183508!10643-109A4;0.583815!10426-106D3;0.136065!10431-106D8;0.589449!10197-103E8;0.33107!10443-106F2;0.698634!10815-111B5;0.74559!10816-111B6;0.350704!10817-111B7;0.329129!10015-101C6;0.327999!10410-106B5;0.242431!10054-101G9;0.517451!10758-110E2;0.611774!10711-109H9;0.910492!10040-101F4;0.475274!10470-106I2;0.354543!10415-106C1;0.576724!10198-103E9;0.346673!10614-108G2;0.685684!10612-108F9;0.383214!10549-107H9;0.476693!10615-108G3;0.956227!10487-107B1;0.130109!10433-106E1;0.313865!10688-109F4;0.568997!10444-106F3;0.322512!10444-106F3;0.432831!10485-107A8;0.34453!10413-106B8;0.226943!10175-103C4;0.405556!10161-103A8;0.477637!12131-128D7;0.388966!10624-108H3;0.25106!10712-109I1;0.811589!10205-103F7;0.969348!10206-103F8;0.687178!10207-103F9;0.903226!10050-101G5;0.414171!10051-101G6;0.140656!10016-101C7;0.546356!10046-101G1;0.473427!10778-110G4;0.980004!10633-108I3;0.810012!10818-111B8;0.316542!10819-111B9;0.215291!10820-111C1;0.231931!10484-107A7;0.218263!10808-111A7;0.743024!10169-103B7;0.764687!10153-102I9;0.552041!13425-144D5;0.413767!13433-144E4;0.237684!13437-144E8;0.210256!11904-125F5;0.105241!11905-125F6;0.988644!10039-101F3;0.677115!10791-110H8;0.340226!10017-101C8;0.774181!10045-101F9;0.95266!10509-107D5;0.54382!10839-111E2;0.280171!10692-109F8;0.493655!10079-102A7;0.311063!10078-102A6;0.594292!10721-110A1;0.145313!10569-108B2;0.441589!10570-108B3;0.353531!10571-108B4;0.307907!10647-109A8;0.0250344!10752-110D5;0.61336!10782-110G8;0.887771!10726-110A6;0.44637!10018-101C9;0.834862!10086-102B5;0.770231!10182-103D2;0.558642!10165-103B3;0.416378!10499-107C4;0.368272!10408-106B3;0.149308!10019-101D1;0.467753!10068-101I5;0.718726!10075-102A3;0.810216!10077-102A5;0.696523!10727-110A7;0.401501!10775-110G1;0.857729!10412-106B7;0.910381!12231-129F8;0.808731!12232-129F9;0.651451!12233-129G1;0.560061!12234-129G2;0.569355!10414-106B9;0.6335!10170-103B8;0.907795!10183-103D3;0.528302!10150-102I6;0.439837!10174-103C3;0.346211!10155-103A2;0.655351!10038-101F2;0.352662!10838-111E1;0.387105!10759-110E3;0.629316!10514-107E1;0.635447!10465-106H6;0.631994!10691-109F7;0.593969!10843-111E6;0.336196!10844-111E7;0.275394!11747-123G1;0.0444331!11748-123G2;0.171424!11749-123G3;0.604803!11750-123G4;0.28523!11751-123G5;0.0494921!11840-124H4;0.30084!11752-123G6;0.0439561!11753-123G7;0.0191966!11754-123G8;0.582641!11755-123G9;0.0190928!11756-123H1;0.000185664!11833-124G6;0.301103!11760-123H5;0.873234!11836-124G9;0.736895!11758-123H3;0.230399!11835-124G8;0.939191!11762-123H7;0.471328!11838-124H2;0.942703!11757-123H2;0.91003!11759-123H4;0.0566319!11761-123H6;0.28868!11842-124H6;0.957891!11837-124H1;0.861051!10568-108B1;0.966352!13230-141I8;0.724437!13231-141I9;0.278022!10696-109G3;0.314788!10493-107B7;0.937651!10494-107B8;0.98097!10850-111F4;0.342462!10851-111F5;0.529161!10852-111F6;0.129765!10853-111F7;0.501659!10854-111F8;0.591881!10855-111F9;0.649251!10856-111G1;0.51168!10847-111F1;0.905959!10846-111E9;0.995481!10848-111F2;0.464465!10845-111E8;0.194295!10857-111G2;0.287527!10858-111G3;0.46728!10156-103A3;0.645131!11901-125F2;0.354091!11902-125F3;0.8806!11903-125F4;0.588044!10689-109F5;0.933184!10648-109A9;0.568614!10784-110H1;0.323163!10744-110C6;0.297675!10772-110F7;0.896032!10474-106I6;0.749201!10600-108E6;0.698095!10684-109E9;0.362302!12226-129F3;0.572799!12227-129F4;0.224197!10508-107D4;0.44549!10539-107G8;0.201582!10607-108F4;0.510519!10555-107I6;0.43156!10774-110F9;0.326799!10637-108I7;0.960246!10663-109C6;0.271807!10728-110A8;0.442845!10729-110A9;0.425897!10430-106D7;0.462811!10730-110B1;0.809707!10813-111B3;0.621761!10812-111B2;0.297733!10037-101F1;0.0992395!10172-103C1;0.364247!10163-103B1;0.385934!10076-102A4;0.343846!10073-102A1;0.370074!10036-101E9;0.412645!10195-103E6;0.310133!10277-104E7;0.394205!10434-106E2;0.582536!10550-107I1;0.840441!10545-107H5;0.526709!10544-107H4;0.65515!10704-109H2;0.774039!10510-107D6;0.893178!10558-107I9;0.0921795!10020-101D2;0.490955!10732-110B3;0.987197!10049-101G4;0.881826!10698-109G5;0.307573!10437-106E5;0.433105!10417-106C3;0.216812!10035-101E8;0.331497!10171-103B9;0.343781!10157-103A4;0.498139!10034-101E7;0.349903!10072-101I9;0.350556!10199-103F1;0.38274!10200-103F2;0.0708934!10697-109G4;0.342042!10723-110A3;0.702321!10179-103C8;0.116011!10160-103A7;0.576405!10180-103C9;0.336327!10162-103A9;0.511426!10021-101D3;0.45288!10840-111E3;0.409317!10706-109H4;0.857182!10033-101E6;0.629147!10032-101E5;0.339634!10490-107B4;0.318531!10439-106E7;0.280165!10022-101D4;0.714752!10176-103C5;0.632891!10469-106I1;0.421677!10067-101I4;0.399527!10411-106B6;0.854489!10471-106I3;0.799405!10030-101E3;0.736339!10475-106I7;0.382354!10787-110H4;0.563041!10477-106I9;0.684175!10695-109G2;0.584672!11771-123I7;0.764059!11772-123I8;0.908745!11773-123I9;0.945858!10093-102C3;0.656726!10442-106F1;0.209137!10442-106F1;0.715218!10201-103F3;0.713823!10639-108I9;0.636039!11843-124H7;0.0396548!11841-124H5;0.837878!10693-109F9;0.497669!10436-106E4;0.086336!10483-107A6;0.422526!10282-104F3;0.0408852!10023-101D5;0.0706056!10066-101I3;0.0674823!10065-101I2;0.983565!10800-110I8;0.788943!10610-108F7;0.228778!10841-111E4;0.188007!10541-107H1;0.534139!10842-111E5;0.555484!10562-108A4;0.417523!10024-101D6;0.407454!10064-101I1;0.841214!10609-108F6;0.94667!10048-101G3;0.491562!10781-110G7;0.569438!10181-103D1;0.633076!10159-103A6;0.508749!10056-101H2;0.446803!10737-110B8;0.428516!10025-101D7;0.755164!10044-101F8;0.823673!10424-106D1;0.871031!10463-106H4;0.932309!10616-108G4;0.468165!10486-107A9;0.154364!10062-101H8;0.250605!10202-103F4;0.378991!10158-103A5;0.0395462!10441-106E9;0.519376!10031-101E4;0.811096!10063-101H9;0.320526!10063-101H9;0.337593!11763-123H8;0.983154!11765-123I1;0.958037!11768-123I4;0.710638!10807-111A6;0.714107!10790-110H7;0.19215!10798-110I6;0.374799!10786-110H3;0.000814145!10591-108D6;0.267798!10593-108D8;0.90549!10590-108D5;0.790183!10026-101D8;0.582489!10096-102C6;0.955907!10168-103B6;0.205349!10154-103A1;0.538188!10209-103G2;0.397638!10061-101H7;0.614231!10027-101D9;0.578095!10043-101F7;0.679938!10783-110G9;0.332431!10028-101E1;0.677611!10060-101H6;0.297002!10203-103F5;0.603397!10059-101H5;0.14929!10047-101G2;0.126216!10029-101E2;0.627645!10058-101H4;0.467264!10418-106C4;0.589684!10492-107B6;0.657991!10694-109G1;0.0800726!10797-110I5;0.56859!10057-101H3;0.306426!10100-102D1;0.519676!10055-101H1;0.89931!10204-103F6;0.982704!10191-103E2;0.865041!10563-108A5;0.487162
|name=motif1068
|name=motif1068
|tomtom_result=Klf4#MA0039.1;0;0.000964139;0.45893;0.729601;7;CCTTTCC;CCTTCCTTTA;-!STAT1#MA0137.2;0;0.00153278;0.729601;0.729601;7;CCTTTCC;CATTTCCCGGAAACC;+!PPARG::RXRA#MA0065.2;3;0.0037589;1.78924;1;7;CCTTTCC;TGACCTTTGCCCTAC;-!Kr#MA0452.1;4;0.00791579;3.76792;1;7;CCTTTCC;TAACCCTTTTG;-!REL#MA0101.1;3;0.00978577;4.65803;1;7;CCTTTCC;GGGGATTTCC;+!IRF2#MA0051.1;11;0.00988151;4.7036;1;7;CCTTTCC;GTTTTGCTTTCACTTTCC;-!RME1#MA0370.1;2;0.0105932;5.04237;1;7;CCTTTCC;TTCCTTTGGA;-!id1#MA0120.1;4;0.0115338;5.49008;1;7;CCTTTCC;TTTTCCTTTTCG;+!RXR::RAR_DR5#MA0159.1;3;0.0116309;5.53632;1;7;CCTTTCC;TGACCTCTCCGTGACCT;-!NFATC2#MA0152.1;-1;0.0121169;5.76763;1;6;CCTTTCC;TTTTCCA;+!PBF#MA0064.1;0;0.0194147;9.24138;1;5;CCTTTCC;GCTTT;-
}}
}}

Latest revision as of 12:35, 7 September 2012

Full Name: motif1068

Motif matrix
POACGT
01100881105161327320375
02014617819996075
033199169470134106
040140875975134190
05162903415149208
06144114981302998
077303115494221629239

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Klf4#MA0039.100.0009641390.458930.7296017CCTTTCCCCTTCCTTTA-
STAT1#MA0137.200.001532780.7296010.7296017CCTTTCCCATTTCCCGGAAACC+
PPARG::RXRA#MA0065.230.00375891.7892417CCTTTCCTGACCTTTGCCCTAC-
Kr#MA0452.140.007915793.7679217CCTTTCCTAACCCTTTTG-
REL#MA0101.130.009785774.6580317CCTTTCCGGGGATTTCC+
IRF2#MA0051.1110.009881514.703617CCTTTCCGTTTTGCTTTCACTTTCC-
RME1#MA0370.120.01059325.0423717CCTTTCCTTCCTTTGGA-
id1#MA0120.140.01153385.4900817CCTTTCCTTTTCCTTTTCG+
RXR::RAR_DR5#MA0159.130.01163095.5363217CCTTTCCTGACCTCTCCGTGACCT-
NFATC2#MA0152.1-10.01211695.7676316CCTTTCCTTTTCCA+
PBF#MA0064.100.01941479.2413815CCTTTCCGCTTT-
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:Motif1068&oldid=2133704"