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MacroAPE 1083:7-GCTGCATT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;488.52;2.655;1948.77;215.055!2;369.045;1688.58;225.675;371.7!3;254.88;122.13;307.98;1970.01!4;361.08;387.63;1558.485;347.805!5;411.525;2139....")
 
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757-123H2;0.11495!11759-123H4;0.104273!11761-123H6;0.633156!11842-124H6;0.137704!11837-124H1;0.674996!10568-108B1;0.474205!13230-141I8;0.27021!13231-141I9;0.0617487!10696-109G3;0.0467825!10493-107B7;0.579959!10494-107B8;0.117897!10850-111F4;0.495087!10851-111F5;0.906224!10852-111F6;0.203733!10853-111F7;0.737411!10854-111F8;0.640032!10855-111F9;0.826313!10856-111G1;0.886226!10847-111F1;0.800541!10846-111E9;0.733728!10848-111F2;0.671508!10845-111E8;0.658411!10857-111G2;0.639735!10858-111G3;0.675853!10156-103A3;0.0902959!11901-125F2;0.000248616!11902-125F3;0.129738!11903-125F4;0.0983582!10689-109F5;0.0748493!10648-109A9;0.138393!10784-110H1;0.257546!10744-110C6;0.219237!10772-110F7;0.522837!10474-106I6;0.222137!10600-108E6;0.0855507!10684-109E9;0.585446!12226-129F3;0.138281!12227-129F4;0.16719!10508-107D4;0.452454!10539-107G8;0.0179908!10607-108F4;0.109528!10555-107I6;0.355448!10774-110F9;0.0314787!10637-108I7;0.930799!10663-109C6;0.026574!10728-110A8;0.418552!10729-110A9;0.279961!10430-106D7;0.402781!10730-110B1;0.759304!10813-111B3;0.0345324!10812-111B2;0.567082!10037-101F1;0.13528!10172-103C1;8.03433e-05!10163-103B1;4.81992e-05!10076-102A4;0.000216013!10073-102A1;1.97518e-05!10036-101E9;0.000137549!10195-103E6;5.00043e-05!10277-104E7;9.86481e-05!10434-106E2;0.0479219!10550-107I1;0.0658317!10545-107H5;0.425723!10544-107H4;0.263466!10704-109H2;0.756509!10510-107D6;0.0885584!10558-107I9;0.579815!10020-101D2;0.745874!10732-110B3;0.173537!10049-101G4;0.100963!10698-109G5;0.981165!10437-106E5;0.122534!10417-106C3;0.441138!10035-101E8;0.309916!10171-103B9;7.42341e-05!10157-103A4;0.00014365!10034-101E7;0.000158184!10072-101I9;7.47658e-05!10199-103F1;0.000241501!10200-103F2;0.10451!10697-109G4;0.847873!10723-110A3;0.0693841!10179-103C8;0.65751!10160-103A7;0.0023477!10180-103C9;0.00393619!10162-103A9;0.0187095!10021-101D3;0.0139294!10840-111E3;0.607918!10706-109H4;0.978185!10033-101E6;0.121964!10032-101E5;0.000579678!10490-107B4;5.33986e-05!10439-106E7;0.433641!10022-101D4;0.955239!10176-103C5;0.118273!10469-106I1;7.76839e-06!10067-101I4;0.456122!10411-106B6;0.0538437!10471-106I3;0.201836!10030-101E3;0.0234501!10475-106I7;0.0328496!10787-110H4;0.442163!10477-106I9;0.960039!10695-109G2;0.176701!11771-123I7;0.926251!11772-123I8;0.655672!11773-123I9;0.625558!10093-102C3;0.621888!10442-106F1;0.391409!10442-106F1;0.327484!10201-103F3;0.542583!10639-108I9;0.652077!11843-124H7;0.402437!11841-124H5;0.446294!10693-109F9;0.962462!10436-106E4;0.274031!10483-107A6;0.0807059!10282-104F3;0.387383!10023-101D5;0.330774!10066-101I3;0.547755!10065-101I2;0.511578!10800-110I8;0.613881!10610-108F7;0.932468!10841-111E4;0.0494801!10541-107H1;0.157969!10842-111E5;0.417814!10562-108A4;0.0799723!10024-101D6;0.498725!10064-101I1;0.747313!10609-108F6;0.288405!10048-101G3;0.543143!10781-110G7;0.11868!10181-103D1;0.239284!10159-103A6;0.000950556!10056-101H2;0.00314539!10737-110B8;0.000162413!10025-101D7;0.0562433!10044-101F8;0.842146!10424-106D1;0.632811!10463-106H4;0.409135!10616-108G4;0.200293!10486-107A9;0.921927!10062-101H8;0.0839541!10202-103F4;0.252411!10158-103A5;0.565147!10441-106E9;0.00789132!10031-101E4;0.240471!10063-101H9;0.000100203!10063-101H9;0.000106857!11763-123H8;0.0569753!11765-123I1;0.0588725!11768-123I4;0.0640996!10807-111A6;0.199194!10790-110H7;0.851926!10798-110I6;0.82345!10786-110H3;0.944214!10591-108D6;0.902422!10593-108D8;0.473504!10590-108D5;0.521808!10026-101D8;0.677125!10096-102C6;0.589029!10168-103B6;0.544943!10154-103A1;0.000306615!10209-103G2;0.00105176!10061-101H7;0.46066!10027-101D9;0.531314!10043-101F7;0.513169!10783-110G9;0.362074!10028-101E1;0.39236!10060-101H6;0.766224!10203-103F5;0.470755!10059-101H5;0.508915!10047-101G2;0.965154!10029-101E2;0.475181!10058-101H4;0.630672!10418-106C4;0.784629!10492-107B6;0.693453!10694-109G1;0.287663!10797-110I5;0.539402!10057-101H3;0.305478!10100-102D1;0.58209!10055-101H1;0.301286!10204-103F6;0.369756!10191-103E2;0.174038!10563-108A5;0.325477
|name=7-GCTGCATT,BestGuess:MA0406.1_TEC1(0.680400387172021),T:2655.0(40.99%),B:13775.5(32.91%),P:1e-36
|name=7-GCTGCATT,BestGuess:MA0406.1_TEC1(0.680400387172021),T:2655.0(40.99%),B:13775.5(32.91%),P:1e-36
|tomtom_result=PHD1#MA0355.1;1;0.00770043;3.6654;1;8;GCTGCATT;ACCTGCAGCA;+!Ddit3::Cebpa#MA0019.1;1;0.0190277;9.05717;1;8;GCTGCATT;AGATGCAATCCC;+
}}
}}

Latest revision as of 13:10, 7 September 2012

Full Name: 7-GCTGCATT,BestGuess:MA0406.1_TEC1(0.680400387172021),T:2655.0(40.99%),B:13775.5(32.91%),P:1e-36

Motif matrix
POACGT
1488.522.6551948.77215.055
2369.0451688.58225.675371.7
3254.88122.13307.981970.01
4361.08387.631558.485347.805
5411.5252139.9379.6523.895
62373.5761.0652.655217.71
7477.958.41252.2251866.465
8265.52.6552.6552384.19

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
PHD1#MA0355.110.007700433.665418GCTGCATTACCTGCAGCA+
Ddit3::Cebpa#MA0019.110.01902779.0571718GCTGCATTAGATGCAATCCC+
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