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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;861.5017681578487;153.56133670225256;124.39767068756983;180.99531988624457!2;55.7527840193943;83.92336528320578;84.72827799035397;1096.05166...")
 
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25!10429-106D6;0.748633!10464-106H5;0.762552!10827-111C8;0.89064!10789-110H6;0.981848!10828-111C9;0.907784!10788-110H5;0.47217!10792-110H9;0.805157!10765-110E9;0.9565!10829-111D1;0.976944!10830-111D2;0.869191!10831-111D3;0.394677!10832-111D4;0.964054!10833-111D5;0.665607!10764-110E8;0.849279!10770-110F5;0.86246!10399-106A3;0.682549!10400-106A4;0.0765227!10405-106A9;0.0868153!10834-111D6;0.0815997!10835-111D7;0.491565!10836-111D8;0.97234!10837-111D9;0.576427!10699-109G6;0.898669!10802-111A1;0.934928!10796-110I4;0.986597!10010-101C1;0.67602!10810-111A9;0.0751027!10421-106C7;0.225778!10708-109H6;0.431168!12235-129G3;0.445321!12236-129G4;0.879647!12237-129G5;0.600655!10167-103B5;0.943596!10151-102I7;0.0237075!10428-106D5;0.00577972!10795-110I3;0.0324196!10805-111A4;0.687842!10052-101G7;0.14047!10189-103D9;0.653269!10589-108D4;0.394046!10425-106D2;0.530679!10427-106D4;0.0630006!10702-109G9;0.174685!10432-106D9;0.894987!10496-107C1;0.375617!10718-109I7;0.674681!10011-101C2;0.653689!10053-101G8;0.182533!10686-109F2;0.171681!10084-102B3;0.565681!10012-101C3;0.0134347!10085-102B4;0.0430318!10482-107A5;0.00454618!10419-106C5;0.346055!10080-102A8;0.122063!10760-110E4;0.0749192!10709-109H7;0.443063!10710-109H8;0.530644!10703-109H1;0.502684!10719-109I8;0.332992!10642-109A3;0.870664!10177-103C6;0.550647!10164-103B2;0.0859399!10173-103C2;0.0218871!10166-103B4;0.341991!10083-102B2;0.106209!10188-103D8;0.18067!10552-107I3;0.049889!10553-107I4;0.177617!10013-101C4;0.15327!10536-107G5;0.948644!10618-108G6;0.928542!10423-106C9;0.584307!10785-110H2;0.648747!12238-129G6;0.467957!12239-129G7;0.759!12240-129G8;0.225552!10416-106C2;0.915859!10801-110I9;0.966092!10766-110F1;0.570186!10824-111C5;0.463629!10825-111C6;0.912321!10826-111C7;0.885204!10454-106G4;0.961896!10409-106B4;0.889743!10638-108I8;0.833528!10636-108I6;0.35004!10513-107D9;0.026545!10420-106C6;0.348401!10082-102B1;0.512224!10014-101C5;0.550794!10070-101I7;0.78086!10452-106G2;0.726913!10453-106G3;0.480802!10449-106F8;0.701332!10042-101F6;0.631464!10069-101I6;0.0879144!10193-103E4;0.488436!10631-108I1;0.0178138!10438-106E6;0.714271!10488-107B2;0.679444!10196-103E7;0.352318!10071-101I8;0.952567!10071-101I8;0.880647!10041-101F5;0.000314383!10451-106G1;0.966153!10450-106F9;0.719396!10604-108F1;0.505633!10605-108F2;0.153607!10606-108F3;0.223951!10603-108E9;0.0965215!10497-107C2;0.411434!10448-106F7;0.0565284!10643-109A4;0.265188!10426-106D3;0.136458!10431-106D8;0.202207!10197-103E8;0.0595128!10443-106F2;0.618389!10815-111B5;0.0346461!10816-111B6;0.741702!10817-111B7;0.585059!10015-101C6;0.668112!10410-106B5;0.967932!10054-101G9;0.321285!10758-110E2;0.525469!10711-109H9;0.102357!10040-101F4;0.576587!10470-106I2;0.0354394!10415-106C1;0.676386!10198-103E9;0.391485!10614-108G2;0.176519!10612-108F9;0.577574!10549-107H9;0.81727!10615-108G3;0.978943!10487-107B1;0.836284!10433-106E1;0.0702231!10688-109F4;0.337893!10444-106F3;0.751424!10444-106F3;0.390096!10485-107A8;0.198966!10413-106B8;0.620919!10175-103C4;0.0973482!10161-103A8;0.0999827!12131-128D7;0.0751644!10624-108H3;0.997797!10712-109I1;0.162332!10205-103F7;0.183082!10206-103F8;0.168047!10207-103F9;0.325849!10050-101G5;0.0174527!10051-101G6;0.50553!10016-101C7;0.0786741!10046-101G1;0.040468!10778-110G4;0.414824!10633-108I3;0.621825!10818-111B8;0.955376!10819-111B9;0.032549!10820-111C1;0.0354027!10484-107A7;0.0283745!10808-111A7;0.819012!10169-103B7;0.639995!10153-102I9;0.122656!13425-144D5;0.0100531!13433-144E4;0.00126191!13437-144E8;0.000364393!11904-125F5;0.000769651!11905-125F6;0.261009!10039-101F3;0.202152!10791-110H8;0.0193999!10017-101C8;0.928625!10045-101F9;0.864036!10509-107D5;0.714178!10839-111E2;0.703142!10692-109F8;0.964338!10079-102A7;0.107415!10078-102A6;0.143198!10721-110A1;0.0471368!10569-108B2;0.0303884!10570-108B3;0.755239!10571-108B4;0.448243!10647-109A8;0.376991!10752-110D5;0.375201!10782-110G8;0.512943!10726-110A6;0.994212!10018-101C9;0.605635!10086-102B5;0.000166176!10182-103D2;0.0697937!10165-103B3;0.0721616!10499-107C4;0.0789336!10408-106B3;0.189633!10019-101D1;0.615547!10068-101I5;0.148584!10075-102A3;0.343758!10077-102A5;0.07916!10727-110A7;0.0178576!10775-110G1;0.733591!10412-106B7;0.967993!12231-129F8;0.133482!12232-129F9;0.0034383!12233-129G1;0.00748849!12234-129G2;0.00490658!10414-106B9;0.00207565!10170-103B8;0.434208!10183-103D3;0.0666554!10150-102I6;0.0172206!10174-103C3;0.0270365!10155-103A2;0.0995702!10038-101F2;0.0533782!10838-111E1;0.0573289!10759-110E3;0.0181535!10514-107E1;0.576078!10465-106H6;0.487354!10691-109F7;0.683894!10843-111E6;0.791034!10844-111E7;0.507055!11747-123G1;0.454399!11748-123G2;0.869008!11749-123G3;0.709737!11750-123G4;0.797207!11751-123G5;0.835541!11840-124H4;0.975268!11752-123G6;0.937866!11753-123G7;0.185929!11754-123G8;0.829632!11755-123G9;0.20777!11756-123H1;0.651224!11833-124G6;0.342518!11760-123H5;0.818909!11836-124G9;0.0977624!11758-123H3;0.848256!11835-124G8;0.318665!11762-123H7;0.978026!11838-124H2;0.830357!11757-123H2;0.34902!11759-123H4;0.162331!11761-123H6;0.64557!11842-124H6;0.23452!11837-124H1;0.797202!10568-108B1;0.893068!13230-141I8;0.859663!13231-141I9;0.50146!10696-109G3;0.56585!10493-107B7;0.221309!10494-107B8;0.614619!10850-111F4;0.621324!10851-111F5;0.0411846!10852-111F6;0.0107!10853-111F7;0.0355263!10854-111F8;0.36706!10855-111F9;0.044483!10856-111G1;0.177461!10847-111F1;0.294212!10846-111E9;0.00338258!10848-111F2;0.479551!10845-111E8;0.0946448!10857-111G2;0.632488!10858-111G3;0.289851!10156-103A3;0.302313!11901-125F2;0.0219461!11902-125F3;0.720125!11903-125F4;0.58822!10689-109F5;0.641523!10648-109A9;0.848599!10784-110H1;0.452317!10744-110C6;0.280142!10772-110F7;0.497644!10474-106I6;0.469316!10600-108E6;0.946749!10684-109E9;0.0175316!12226-129F3;0.812106!12227-129F4;0.789956!10508-107D4;0.0660811!10539-107G8;0.80026!10607-108F4;0.54647!10555-107I6;0.584575!10774-110F9;0.910842!10637-108I7;0.571972!10663-109C6;0.907348!10728-110A8;0.676489!10729-110A9;0.934695!10430-106D7;0.858722!10730-110B1;0.776725!10813-111B3;0.393454!10812-111B2;0.337552!10037-101F1;0.793403!10172-103C1;0.0253163!10163-103B1;0.0455041!10076-102A4;0.0240045!10073-102A1;0.0489916!10036-101E9;0.00486002!10195-103E6;0.0299548!10277-104E7;0.0199694!10434-106E2;0.897579!10550-107I1;0.501569!10545-107H5;0.604328!10544-107H4;0.133689!10704-109H2;0.400445!10510-107D6;0.308839!10558-107I9;0.456223!10020-101D2;0.124095!10732-110B3;0.104476!10049-101G4;0.235567!10698-109G5;0.0214223!10437-106E5;0.957979!10417-106C3;0.985094!10035-101E8;0.285365!10171-103B9;0.0555898!10157-103A4;0.0450779!10034-101E7;0.0311403!10072-101I9;0.0402201!10199-103F1;0.00349919!10200-103F2;0.0366489!10697-109G4;0.83833!10723-110A3;0.637188!10179-103C8;0.396723!10160-103A7;0.980229!10180-103C9;0.618854!10162-103A9;0.832656!10021-101D3;0.721654!10840-111E3;0.17735!10706-109H4;0.939927!10033-101E6;0.997876!10032-101E5;0.222818!10490-107B4;0.0308476!10439-106E7;0.601945!10022-101D4;0.367918!10176-103C5;0.336735!10469-106I1;0.0261318!10067-101I4;0.851425!10411-106B6;0.353023!10471-106I3;0.0885022!10030-101E3;0.195288!10475-106I7;0.316537!10787-110H4;0.886265!10477-106I9;0.448784!10695-109G2;0.433006!11771-123I7;0.786099!11772-123I8;0.353225!11773-123I9;0.337144!10093-102C3;0.635502!10442-106F1;0.119582!10442-106F1;0.283927!10201-103F3;0.163768!10639-108I9;0.580532!11843-124H7;0.0506487!11841-124H5;0.390763!10693-109F9;0.0389872!10436-106E4;0.727169!10483-107A6;0.257974!10282-104F3;0.907105!10023-101D5;0.212629!10066-101I3;0.267243!10065-101I2;0.824996!10800-110I8;0.820915!10610-108F7;0.429403!10841-111E4;0.128687!10541-107H1;0.434688!10842-111E5;0.113736!10562-108A4;0.705822!10024-101D6;0.930842!10064-101I1;0.570595!10609-108F6;0.308876!10048-101G3;0.435156!10781-110G7;0.341871!10181-103D1;0.962792!10159-103A6;0.0889082!10056-101H2;0.0342786!10737-110B8;0.00494254!10025-101D7;0.568515!10044-101F8;0.00844873!10424-106D1;0.181499!10463-106H4;0.707712!10616-108G4;0.992115!10486-107A9;0.643946!10062-101H8;0.502601!10202-103F4;0.342248!10158-103A5;0.257669!10441-106E9;0.277182!10031-101E4;0.876444!10063-101H9;0.0170462!10063-101H9;0.00140734!11763-123H8;0.412206!11765-123I1;0.902306!11768-123I4;0.555534!10807-111A6;0.362589!10790-110H7;2.46769e-05!10798-110I6;0.0056029!10786-110H3;0.217572!10591-108D6;0.000254599!10593-108D8;0.00436272!10590-108D5;0.00224477!10026-101D8;0.0542841!10096-102C6;0.135267!10168-103B6;0.0399755!10154-103A1;0.0359131!10209-103G2;0.0297996!10061-101H7;0.766816!10027-101D9;0.870124!10043-101F7;0.907357!10783-110G9;0.944927!10028-101E1;0.202301!10060-101H6;0.0332679!10203-103F5;0.228755!10059-101H5;0.749009!10047-101G2;0.701944!10029-101E2;0.895977!10058-101H4;0.668043!10418-106C4;0.7447!10492-107B6;0.120231!10694-109G1;0.972398!10797-110I5;0.687629!10057-101H3;0.927944!10100-102D1;0.334127!10055-101H1;0.859603!10204-103F6;0.719976!10191-103E2;0.127761!10563-108A5;0.386468
|name=PO5F1_do
|name=PO5F1_do
|tomtom_result=Pou5f1#MA0142.1;0;2.8889e-27;1.37511e-24;2.74953e-24;15;ATTTGCATAACAAAGG;ATTTGCATAACAAAG;-!Sox2#MA0143.1;-1;1.11972e-12;5.32985e-10;5.3285e-10;15;ATTTGCATAACAAAGG;TTTGCATAACAAAGG;-!nub#MA0453.1;3;0.000708802;0.33739;0.224869;9;ATTTGCATAACAAAGG;CTAATTTGCATA;-!ARR1#MA0274.1;0;0.00136933;0.651803;0.325819;8;ATTTGCATAACAAAGG;ACTTGAAT;+!vvl#MA0254.1;-3;0.00387802;1.84594;0.738188;6;ATTTGCATAACAAAGG;TGCATA;-!INO2#MA0321.1;-4;0.00517786;2.46466;0.765055;9;ATTTGCATAACAAAGG;GCATGTGAA;+!hb#MA0049.1;-4;0.00562683;2.67837;0.765055;10;ATTTGCATAACAAAGG;GCATAAAAAA;+!NHP6B#MA0346.1;3;0.00713432;3.39594;0.848769;16;ATTTGCATAACAAAGG;TTTATTTATATATAATATGA;+!SOK2#MA0385.1;0;0.00843429;4.01472;0.850486;11;ATTTGCATAACAAAGG;ACCTGCAGGCA;+!INO4#MA0322.1;-4;0.00893595;4.25351;0.850486;9;ATTTGCATAACAAAGG;GCATGTGAA;+!CG11617#MA0173.1;-1;0.0117585;5.59704;0.928275;7;ATTTGCATAACAAAGG;TTAACAT;+!HLF#MA0043.1;0;0.0118126;5.62279;0.928275;12;ATTTGCATAACAAAGG;TATTACGTAACC;-!D#MA00445.1;-6;0.0140606;6.69283;0.928275;10;ATTTGCATAACAAAGG;AGAACAATGGA;-!MATALPHA2#MA0328.1;0;0.01418;6.74966;0.928275;9;ATTTGCATAACAAAGG;AATTACATG;-!YPR015C#MA0435.1;7;0.015861;7.54986;0.928275;13;ATTTGCATAACAAAGG;TGTAAGGATTTACGTCTTCA;-!TBP#MA0386.1;5;0.0165805;7.89234;0.928275;16;ATTTGCATAACAAAGG;ATCGAATATATATATCTAGTC;-!fkh#MA0446.1;1;0.019211;9.14442;0.99655;10;ATTTGCATAACAAAGG;TGTTTGCTTAA;+!NHP6A#MA0345.1;5;0.0200697;9.55317;0.99655;16;ATTTGCATAACAAAGG;ATGACCTATATATAAAAATGA;+!FOXL1#MA0033.1;-1;0.0209412;9.96803;0.99655;8;ATTTGCATAACAAAGG;TATACATA;+
}}
}}

Latest revision as of 13:17, 7 September 2012

Full Name: PO5F1_do

Motif matrix
POACGT
1861.5017681578487153.56133670225256124.39767068756983180.99531988624457
255.752784019394383.9233652832057884.728277990353971096.0516681409742
3127.30830349428444273.0680002398338578.5522467244468841.5275449753515
4239.7699013910475722.0657622044661411.7224361711226491046.8979956672895
5196.60858791768607102.443073161797391011.57827462276549.82615973167633
681.158054468848631189.852429126356642.550061149831856.895550688895676
71274.93837034842617.5851057577852443.44777534444783834.484843983277315
8117.1373662281636416.5493216533495721.376207135576651165.3932004168435
9569.4597200251796143.32627776836884325.227686922423282.44241071793584
10802.27284663881366.2114676909962764.94062465267682387.03115645143083
1187.9053855861528773.0550470743985292.33139673704426167.1642660363206
121128.9950013372872108.7544383020290636.2899319800959746.41672381452018
131185.998652158937139.17639559117975587.35116439158777.929883292230027
14651.297341444890442.58711604272965479.03235813321605547.5392798130729
15357.336143057483378.57931349931165759.6928211348787124.8478177422402
16341.79763250200347196.96270587999828608.5755392179979173.12021783390892

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Pou5f1#MA0142.102.8889e-271.37511e-242.74953e-2415ATTTGCATAACAAAGGATTTGCATAACAAAG-
Sox2#MA0143.1-11.11972e-125.32985e-105.3285e-1015ATTTGCATAACAAAGGTTTGCATAACAAAGG-
nub#MA0453.130.0007088020.337390.2248699ATTTGCATAACAAAGGCTAATTTGCATA-
ARR1#MA0274.100.001369330.6518030.3258198ATTTGCATAACAAAGGACTTGAAT+
vvl#MA0254.1-30.003878021.845940.7381886ATTTGCATAACAAAGGTGCATA-
INO2#MA0321.1-40.005177862.464660.7650559ATTTGCATAACAAAGGGCATGTGAA+
hb#MA0049.1-40.005626832.678370.76505510ATTTGCATAACAAAGGGCATAAAAAA+
NHP6B#MA0346.130.007134323.395940.84876916ATTTGCATAACAAAGGTTTATTTATATATAATATGA+
SOK2#MA0385.100.008434294.014720.85048611ATTTGCATAACAAAGGACCTGCAGGCA+
INO4#MA0322.1-40.008935954.253510.8504869ATTTGCATAACAAAGGGCATGTGAA+
CG11617#MA0173.1-10.01175855.597040.9282757ATTTGCATAACAAAGGTTAACAT+
HLF#MA0043.100.01181265.622790.92827512ATTTGCATAACAAAGGTATTACGTAACC-
D#MA00445.1-60.01406066.692830.92827510ATTTGCATAACAAAGGAGAACAATGGA-
MATALPHA2#MA0328.100.014186.749660.9282759ATTTGCATAACAAAGGAATTACATG-
YPR015C#MA0435.170.0158617.549860.92827513ATTTGCATAACAAAGGTGTAAGGATTTACGTCTTCA-
TBP#MA0386.150.01658057.892340.92827516ATTTGCATAACAAAGGATCGAATATATATATCTAGTC-
fkh#MA0446.110.0192119.144420.9965510ATTTGCATAACAAAGGTGTTTGCTTAA+
NHP6A#MA0345.150.02006979.553170.9965516ATTTGCATAACAAAGGATGACCTATATATAAAAATGA+
FOXL1#MA0033.1-10.02094129.968030.996558ATTTGCATAACAAAGGTATACATA+
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