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MacroAPE 1083:8-CATACGC: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;378.88;1565.248;161.024;262.848!2;1955.968;61.568;196.544;153.92!3;151.552;499.648;2.368;1714.432!4;1302.4;182.336;149.184;734.08!5;222.592;...")
 
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97!10828-111C9;0.681213!10788-110H5;0.780535!10792-110H9;0.857492!10765-110E9;0.724628!10829-111D1;0.692751!10830-111D2;0.81088!10831-111D3;0.962239!10832-111D4;0.8781!10833-111D5;0.876745!10764-110E8;0.701653!10770-110F5;0.963174!10399-106A3;0.967917!10400-106A4;0.709894!10405-106A9;0.694945!10834-111D6;0.659311!10835-111D7;0.649066!10836-111D8;0.957339!10837-111D9;0.843901!10699-109G6;0.982724!10802-111A1;0.939271!10796-110I4;0.813535!10010-101C1;0.466938!10810-111A9;0.98822!10421-106C7;0.8234!10708-109H6;0.97343!12235-129G3;0.861771!12236-129G4;0.219442!12237-129G5;0.273649!10167-103B5;0.173646!10151-102I7;0.0709969!10428-106D5;0.0467209!10795-110I3;0.528937!10805-111A4;0.695772!10052-101G7;0.783317!10189-103D9;0.655192!10589-108D4;0.718939!10425-106D2;0.902937!10427-106D4;0.00756453!10702-109G9;0.860869!10432-106D9;0.639253!10496-107C1;0.935784!10718-109I7;0.171232!10011-101C2;0.53106!10053-101G8;0.714403!10686-109F2;0.741802!10084-102B3;0.261516!10012-101C3;0.153648!10085-102B4;0.0853775!10482-107A5;0.0344925!10419-106C5;0.514924!10080-102A8;0.501439!10760-110E4;0.992183!10709-109H7;0.449091!10710-109H8;0.682793!10703-109H1;0.0665738!10719-109I8;0.516222!10642-109A3;0.18281!10177-103C6;0.0566698!10164-103B2;0.0680579!10173-103C2;0.0433026!10166-103B4;0.0449508!10083-102B2;0.0592087!10188-103D8;0.076528!10552-107I3;0.120412!10553-107I4;0.666584!10013-101C4;0.215388!10536-107G5;0.635166!10618-108G6;0.321858!10423-106C9;0.645955!10785-110H2;0.879469!12238-129G6;0.420205!12239-129G7;0.98882!12240-129G8;0.997923!10416-106C2;0.953463!10801-110I9;0.500766!10766-110F1;0.889459!10824-111C5;0.834314!10825-111C6;0.785113!10826-111C7;0.938199!10454-106G4;0.908065!10409-106B4;0.912171!10638-108I8;0.614931!10636-108I6;0.615032!10513-107D9;0.431542!10420-106C6;0.541664!10082-102B1;0.411136!10014-101C5;0.629143!10070-101I7;0.978972!10452-106G2;0.993911!10453-106G3;0.83184!10449-106F8;0.772931!10042-101F6;0.947863!10069-101I6;0.228819!10193-103E4;0.742259!10631-108I1;0.0988198!10438-106E6;0.770886!10488-107B2;0.657472!10196-103E7;0.24872!10071-101I8;0.918735!10071-101I8;0.971563!10041-101F5;0.025969!10451-106G1;0.484466!10450-106F9;0.989963!10604-108F1;0.43978!10605-108F2;0.785114!10606-108F3;0.892394!10603-108E9;0.961791!10497-107C2;0.529958!10448-106F7;0.556935!10643-109A4;0.598231!10426-106D3;0.830207!10431-106D8;0.558051!10197-103E8;0.84844!10443-106F2;0.698624!10815-111B5;0.812176!10816-111B6;0.554566!10817-111B7;0.604574!10015-101C6;0.555681!10410-106B5;0.799553!10054-101G9;0.345536!10758-110E2;0.515391!10711-109H9;0.582732!10040-101F4;0.752604!10470-106I2;0.066289!10415-106C1;0.287182!10198-103E9;0.885563!10614-108G2;0.944867!10612-108F9;0.480591!10549-107H9;0.522836!10615-108G3;0.853331!10487-107B1;0.432914!10433-106E1;0.744165!10688-109F4;0.5018!10444-106F3;0.537163!10444-106F3;0.0460126!10485-107A8;0.0437909!10413-106B8;0.7295!10175-103C4;0.690507!10161-103A8;0.0616493!12131-128D7;0.106531!10624-108H3;0.671693!10712-109I1;0.100532!10205-103F7;0.573992!10206-103F8;0.663717!10207-103F9;0.384353!10050-101G5;0.474074!10051-101G6;0.567225!10016-101C7;0.975342!10046-101G1;0.622717!10778-110G4;0.441023!10633-108I3;0.366794!10818-111B8;0.427795!10819-111B9;0.844972!10820-111C1;0.805235!10484-107A7;0.858659!10808-111A7;0.618906!10169-103B7;0.550109!10153-102I9;0.0583987!13425-144D5;0.0730112!13433-144E4;0.722903!13437-144E8;0.792757!11904-125F5;0.666353!11905-125F6;0.542129!10039-101F3;0.573156!10791-110H8;0.0713367!10017-101C8;0.32873!10045-101F9;0.868865!10509-107D5;0.527858!10839-111E2;0.921154!10692-109F8;0.492716!10079-102A7;0.733619!10078-102A6;0.974153!10721-110A1;0.756474!10569-108B2;0.593301!10570-108B3;0.369997!10571-108B4;0.686733!10647-109A8;0.698599!10752-110D5;0.550083!10782-110G8;0.972786!10726-110A6;0.811332!10018-101C9;0.983806!10086-102B5;0.209319!10182-103D2;0.0864615!10165-103B3;0.130544!10499-107C4;0.138427!10408-106B3;0.808745!10019-101D1;0.964381!10068-101I5;0.990974!10075-102A3;0.499095!10077-102A5;0.738071!10727-110A7;0.742975!10775-110G1;0.55911!10412-106B7;0.732844!12231-129F8;0.920132!12232-129F9;0.993927!12233-129G1;0.962908!12234-129G2;0.782387!10414-106B9;0.767475!10170-103B8;0.439967!10183-103D3;0.0780276!10150-102I6;0.0585878!10174-103C3;0.0621438!10155-103A2;0.373087!10038-101F2;0.199149!10838-111E1;0.207376!10759-110E3;0.38646!10514-107E1;0.177973!10465-106H6;0.522477!10691-109F7;0.295852!10843-111E6;0.945501!10844-111E7;0.396785!11747-123G1;0.169031!11748-123G2;0.750667!11749-123G3;0.451415!11750-123G4;0.817696!11751-123G5;0.739091!11840-124H4;0.671668!11752-123G6;0.141877!11753-123G7;0.620942!11754-123G8;0.745075!11755-123G9;0.72469!11756-123H1;0.111933!11833-124G6;0.104908!11760-123H5;0.864815!11836-124G9;0.0816317!11758-123H3;0.621318!11835-124G8;0.712069!11762-123H7;0.560361!11838-124H2;0.933262!11757-123H2;0.661334!11759-123H4;0.0237115!11761-123H6;0.477633!11842-124H6;0.298926!11837-124H1;0.308084!10568-108B1;0.543433!13230-141I8;0.676972!13231-141I9;0.352473!10696-109G3;0.487583!10493-107B7;0.104368!10494-107B8;0.771627!10850-111F4;0.376091!10851-111F5;0.421992!10852-111F6;0.661135!10853-111F7;0.949237!10854-111F8;0.359595!10855-111F9;0.965613!10856-111G1;0.148943!10847-111F1;0.354777!10846-111E9;0.406707!10848-111F2;0.198253!10845-111E8;0.423669!10857-111G2;0.57628!10858-111G3;0.557783!10156-103A3;0.159163!11901-125F2;0.0468775!11902-125F3;0.788405!11903-125F4;0.709563!10689-109F5;0.65572!10648-109A9;0.497678!10784-110H1;0.38209!10744-110C6;0.444701!10772-110F7;0.475433!10474-106I6;0.943166!10600-108E6;0.639505!10684-109E9;0.521033!12226-129F3;0.516306!12227-129F4;0.715919!10508-107D4;0.170836!10539-107G8;0.134376!10607-108F4;0.155981!10555-107I6;0.639725!10774-110F9;0.0836449!10637-108I7;0.880628!10663-109C6;0.124259!10728-110A8;0.934347!10729-110A9;0.357111!10430-106D7;0.450867!10730-110B1;0.757681!10813-111B3;0.71007!10812-111B2;0.726696!10037-101F1;0.542333!10172-103C1;0.073057!10163-103B1;0.0456347!10076-102A4;0.0532305!10073-102A1;0.0766803!10036-101E9;0.021607!10195-103E6;0.0850278!10277-104E7;0.0754351!10434-106E2;0.262013!10550-107I1;0.460256!10545-107H5;0.785075!10544-107H4;0.291871!10704-109H2;0.481694!10510-107D6;0.907839!10558-107I9;0.056741!10020-101D2;0.0320157!10732-110B3;0.538323!10049-101G4;0.861921!10698-109G5;0.210799!10437-106E5;0.893806!10417-106C3;0.613366!10035-101E8;0.316574!10171-103B9;0.0765619!10157-103A4;0.0702232!10034-101E7;0.0515974!10072-101I9;0.0922936!10199-103F1;0.0261158!10200-103F2;0.968527!10697-109G4;0.867474!10723-110A3;0.507712!10179-103C8;0.312792!10160-103A7;0.111572!10180-103C9;0.0695577!10162-103A9;0.385083!10021-101D3;0.147911!10840-111E3;0.680942!10706-109H4;0.681316!10033-101E6;0.00501719!10032-101E5;0.0892452!10490-107B4;0.0873692!10439-106E7;0.465148!10022-101D4;0.438656!10176-103C5;0.920922!10469-106I1;0.0393615!10067-101I4;0.488587!10411-106B6;0.581932!10471-106I3;0.223969!10030-101E3;0.624616!10475-106I7;0.381586!10787-110H4;0.404333!10477-106I9;0.884802!10695-109G2;0.168172!11771-123I7;0.721678!11772-123I8;0.756821!11773-123I9;0.694828!10093-102C3;0.33288!10442-106F1;0.999892!10442-106F1;0.670377!10201-103F3;0.531353!10639-108I9;0.980642!11843-124H7;0.738662!11841-124H5;0.775388!10693-109F9;0.810472!10436-106E4;0.956199!10483-107A6;0.348379!10282-104F3;0.494091!10023-101D5;0.956726!10066-101I3;0.8792!10065-101I2;0.978512!10800-110I8;0.969672!10610-108F7;0.453226!10841-111E4;0.296024!10541-107H1;0.8096!10842-111E5;0.519926!10562-108A4;0.377027!10024-101D6;0.865335!10064-101I1;0.644913!10609-108F6;0.861643!10048-101G3;0.503177!10781-110G7;0.610015!10181-103D1;0.905004!10159-103A6;0.211474!10056-101H2;0.172085!10737-110B8;0.329716!10025-101D7;0.927385!10044-101F8;0.615184!10424-106D1;0.752089!10463-106H4;0.856547!10616-108G4;0.637639!10486-107A9;0.552604!10062-101H8;0.68747!10202-103F4;0.93928!10158-103A5;0.722195!10441-106E9;0.299732!10031-101E4;0.0171337!10063-101H9;0.0960374!10063-101H9;0.0254421!11763-123H8;0.533855!11765-123I1;0.367253!11768-123I4;0.412448!10807-111A6;0.244765!10790-110H7;0.378197!10798-110I6;0.54458!10786-110H3;0.553796!10591-108D6;0.99737!10593-108D8;0.944768!10590-108D5;0.372186!10026-101D8;0.527673!10096-102C6;0.743445!10168-103B6;0.176242!10154-103A1;0.161295!10209-103G2;0.0947263!10061-101H7;0.566498!10027-101D9;0.703521!10043-101F7;0.823807!10783-110G9;0.683646!10028-101E1;0.912383!10060-101H6;0.582717!10203-103F5;0.551715!10059-101H5;0.54471!10047-101G2;0.624603!10029-101E2;0.6645!10058-101H4;0.658642!10418-106C4;0.704659!10492-107B6;0.754743!10694-109G1;0.919752!10797-110I5;0.428911!10057-101H3;0.668599!10100-102D1;0.827527!10055-101H1;0.433131!10204-103F6;0.592583!10191-103E2;0.606623!10563-108A5;0.905278
|name=8-CATACGC,CNhs13793,BestGuess:NRF1_f1_HM09(0.642650501149626),T:2368.0(48.16%),B:17299.0(39.98%),P:1e-30
|name=8-CATACGC,CNhs13793,BestGuess:NRF1_f1_HM09(0.642650501149626),T:2368.0(48.16%),B:17299.0(39.98%),P:1e-30
|tomtom_result=twi#MA0249.1;3;0.0123419;5.87474;1;7;CATACGC;CAACATATGCGA;-!UPC2#MA0411.1;0;0.0186427;8.87393;1;7;CATACGC;TATACGA;+
}}
}}

Latest revision as of 13:33, 7 September 2012

Full Name: 8-CATACGC,CNhs13793,BestGuess:NRF1_f1_HM09(0.642650501149626),T:2368.0(48.16%),B:17299.0(39.98%),P:1e-30

Motif matrix
POACGT
1378.881565.248161.024262.848
21955.96861.568196.544153.92
3151.552499.6482.3681714.432
41302.4182.336149.184734.08
5222.5921780.736215.488149.184
6587.264161.0241503.68116.032
7134.9762031.744106.5694.72

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
twi#MA0249.130.01234195.8747417CATACGCCAACATATGCGA-
UPC2#MA0411.100.01864278.8739317CATACGCTATACGA+
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