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MacroAPE 1083:7-TSTCWCG: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;1.788;312.9;1.788;1471.524!2;134.1;783.144;868.968;1.788!3;277.14;1.788;307.536;1201.536!4;1.788;1056.708;627.588;101.916!5;920.82;1.788;1.7...")
 
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8;0.33291!10789-110H6;0.167295!10828-111C9;0.148709!10788-110H5;0.35281!10792-110H9;0.477356!10765-110E9;0.434336!10829-111D1;0.49402!10830-111D2;0.437554!10831-111D3;0.349677!10832-111D4;0.140986!10833-111D5;0.551167!10764-110E8;0.58933!10770-110F5;0.24269!10399-106A3;0.122714!10400-106A4;0.399449!10405-106A9;0.421522!10834-111D6;0.525362!10835-111D7;0.372287!10836-111D8;0.379006!10837-111D9;0.215382!10699-109G6;0.113044!10802-111A1;0.212566!10796-110I4;0.270312!10010-101C1;0.787651!10810-111A9;0.477764!10421-106C7;0.926289!10708-109H6;0.252852!12235-129G3;0.75332!12236-129G4;0.249901!12237-129G5;0.801949!10167-103B5;0.181794!10151-102I7;0.246682!10428-106D5;0.249565!10795-110I3;0.189059!10805-111A4;0.430745!10052-101G7;0.894156!10189-103D9;0.885077!10589-108D4;0.821603!10425-106D2;0.676524!10427-106D4;0.282941!10702-109G9;0.710486!10432-106D9;0.944536!10496-107C1;0.878824!10718-109I7;0.583914!10011-101C2;0.381705!10053-101G8;0.795304!10686-109F2;0.891878!10084-102B3;0.611214!10012-101C3;0.288859!10085-102B4;0.368451!10482-107A5;0.265874!10419-106C5;0.615131!10080-102A8;0.908825!10760-110E4;0.503842!10709-109H7;0.971304!10710-109H8;0.797886!10703-109H1;0.698411!10719-109I8;0.394075!10642-109A3;0.232018!10177-103C6;0.36293!10164-103B2;0.179558!10173-103C2;0.178401!10166-103B4;0.440431!10083-102B2;0.498202!10188-103D8;0.426522!10552-107I3;0.215408!10553-107I4;0.593142!10013-101C4;0.0302603!10536-107G5;0.943746!10618-108G6;0.115251!10423-106C9;0.895111!10785-110H2;0.896015!12238-129G6;0.417391!12239-129G7;0.671696!12240-129G8;0.102445!10416-106C2;0.941439!10801-110I9;0.221779!10766-110F1;0.116286!10824-111C5;0.263009!10825-111C6;0.364863!10826-111C7;0.391998!10454-106G4;0.39432!10409-106B4;0.412474!10638-108I8;0.150388!10636-108I6;0.977803!10513-107D9;0.872387!10420-106C6;0.770721!10082-102B1;0.818686!10014-101C5;0.502545!10070-101I7;0.992784!10452-106G2;0.810697!10453-106G3;0.507927!10449-106F8;0.995224!10042-101F6;0.847833!10069-101I6;0.213806!10193-103E4;0.746471!10631-108I1;0.162534!10438-106E6;0.148068!10488-107B2;0.194055!10196-103E7;0.741777!10071-101I8;0.873996!10071-101I8;0.760668!10041-101F5;0.101821!10451-106G1;0.671947!10450-106F9;0.591694!10604-108F1;0.713811!10605-108F2;0.452179!10606-108F3;0.539626!10603-108E9;0.25953!10497-107C2;0.704707!10448-106F7;0.656097!10643-109A4;0.181643!10426-106D3;0.836695!10431-106D8;0.91402!10197-103E8;0.644202!10443-106F2;0.910769!10815-111B5;0.541498!10816-111B6;0.913777!10817-111B7;0.753117!10015-101C6;0.949153!10410-106B5;0.925896!10054-101G9;0.747423!10758-110E2;0.669465!10711-109H9;0.320021!10040-101F4;0.853207!10470-106I2;0.288571!10415-106C1;0.667071!10198-103E9;0.784407!10614-108G2;0.981108!10612-108F9;0.766302!10549-107H9;0.666636!10615-108G3;0.800621!10487-107B1;0.0419517!10433-106E1;0.71881!10688-109F4;0.206359!10444-106F3;0.586107!10444-106F3;0.866557!10485-107A8;0.743584!10413-106B8;0.955885!10175-103C4;0.916284!10161-103A8;0.170188!12131-128D7;0.186107!10624-108H3;0.565525!10712-109I1;0.606744!10205-103F7;0.701642!10206-103F8;0.814857!10207-103F9;0.945924!10050-101G5;0.520441!10051-101G6;0.957791!10016-101C7;0.917979!10046-101G1;0.995725!10778-110G4;0.65057!10633-108I3;0.978131!10818-111B8;0.303124!10819-111B9;0.752984!10820-111C1;0.693154!10484-107A7;0.807457!10808-111A7;0.467953!10169-103B7;0.190652!10153-102I9;0.236201!13425-144D5;0.238708!13433-144E4;0.997712!13437-144E8;0.953078!11904-125F5;0.985201!11905-125F6;0.219971!10039-101F3;0.00536329!10791-110H8;0.265088!10017-101C8;0.560825!10045-101F9;0.728281!10509-107D5;0.787968!10839-111E2;0.556224!10692-109F8;0.945978!10079-102A7;0.742236!10078-102A6;0.698055!10721-110A1;0.809138!10569-108B2;0.675952!10570-108B3;0.748585!10571-108B4;0.382198!10647-109A8;0.224782!10752-110D5;0.976952!10782-110G8;0.225627!10726-110A6;0.157155!10018-101C9;0.533477!10086-102B5;0.679185!10182-103D2;0.431322!10165-103B3;0.239462!10499-107C4;0.286016!10408-106B3;0.617036!10019-101D1;0.454266!10068-101I5;0.894382!10075-102A3;0.921138!10077-102A5;0.745236!10727-110A7;0.444814!10775-110G1;0.342922!10412-106B7;0.319338!12231-129F8;0.907453!12232-129F9;0.379017!12233-129G1;0.643047!12234-129G2;0.593334!10414-106B9;0.549624!10170-103B8;0.522339!10183-103D3;0.325664!10150-102I6;0.288788!10174-103C3;0.316715!10155-103A2;0.306139!10038-101F2;0.3328!10838-111E1;0.36093!10759-110E3;0.367675!10514-107E1;0.868136!10465-106H6;0.497516!10691-109F7;0.481613!10843-111E6;0.375609!10844-111E7;0.633578!11747-123G1;0.0980212!11748-123G2;0.0887426!11749-123G3;0.72856!11750-123G4;0.140772!11751-123G5;0.162991!11840-124H4;0.535559!11752-123G6;0.610103!11753-123G7;0.464294!11754-123G8;0.757676!11755-123G9;0.508854!11756-123H1;0.184205!11833-124G6;0.10068!11760-123H5;0.614649!11836-124G9;0.151276!11758-123H3;0.0451288!11835-124G8;0.299626!11762-123H7;0.58752!11838-124H2;0.958364!11757-123H2;0.861328!11759-123H4;0.069763!11761-123H6;0.309464!11842-124H6;0.699467!11837-124H1;0.559193!10568-108B1;0.511185!13230-141I8;0.618359!13231-141I9;0.756456!10696-109G3;0.989673!10493-107B7;0.649029!10494-107B8;0.71247!10850-111F4;0.546582!10851-111F5;0.84797!10852-111F6;0.413142!10853-111F7;0.713367!10854-111F8;0.896493!10855-111F9;0.779068!10856-111G1;0.387203!10847-111F1;0.99334!10846-111E9;0.64071!10848-111F2;0.593604!10845-111E8;0.723716!10857-111G2;0.697911!10858-111G3;0.717793!10156-103A3;0.89942!11901-125F2;0.330133!11902-125F3;0.8679!11903-125F4;0.839154!10689-109F5;0.974203!10648-109A9;0.429929!10784-110H1;0.945967!10744-110C6;0.400156!10772-110F7;0.529835!10474-106I6;0.259078!10600-108E6;0.269716!10684-109E9;0.597495!12226-129F3;0.801693!12227-129F4;0.120683!10508-107D4;0.267886!10539-107G8;0.204895!10607-108F4;0.636469!10555-107I6;0.230623!10774-110F9;0.128189!10637-108I7;0.889021!10663-109C6;0.141471!10728-110A8;0.22382!10729-110A9;0.375682!10430-106D7;0.630159!10730-110B1;0.674185!10813-111B3;0.603365!10812-111B2;0.359777!10037-101F1;0.514657!10172-103C1;0.236613!10163-103B1;0.239028!10076-102A4;0.275144!10073-102A1;0.224205!10036-101E9;0.159222!10195-103E6;0.270265!10277-104E7;0.290448!10434-106E2;0.124004!10550-107I1;0.579105!10545-107H5;0.634486!10544-107H4;0.539276!10704-109H2;0.968589!10510-107D6;0.712764!10558-107I9;0.347933!10020-101D2;0.747028!10732-110B3;0.734504!10049-101G4;0.850924!10698-109G5;0.573599!10437-106E5;0.783007!10417-106C3;0.642235!10035-101E8;0.359185!10171-103B9;0.304487!10157-103A4;0.306949!10034-101E7;0.25034!10072-101I9;0.276793!10199-103F1;0.158733!10200-103F2;0.511757!10697-109G4;0.952227!10723-110A3;0.0181801!10179-103C8;0.619557!10160-103A7;0.448443!10180-103C9;0.785238!10162-103A9;0.232083!10021-101D3;0.186284!10840-111E3;0.77524!10706-109H4;0.728325!10033-101E6;0.975488!10032-101E5;0.420901!10490-107B4;0.303953!10439-106E7;0.75806!10022-101D4;0.610673!10176-103C5;0.765771!10469-106I1;0.155832!10067-101I4;0.0534267!10411-106B6;0.486077!10471-106I3;0.633557!10030-101E3;0.945737!10475-106I7;0.374198!10787-110H4;0.913388!10477-106I9;0.660791!10695-109G2;0.91555!11771-123I7;0.223214!11772-123I8;0.61196!11773-123I9;0.682742!10093-102C3;0.234289!10442-106F1;0.419563!10442-106F1;0.798806!10201-103F3;0.626443!10639-108I9;0.543207!11843-124H7;0.274486!11841-124H5;0.378607!10693-109F9;0.375257!10436-106E4;0.650646!10483-107A6;0.67273!10282-104F3;0.705076!10023-101D5;0.886162!10066-101I3;0.835602!10065-101I2;0.509948!10800-110I8;0.69546!10610-108F7;0.0766238!10841-111E4;0.972409!10541-107H1;0.524452!10842-111E5;0.904363!10562-108A4;0.472993!10024-101D6;0.0150126!10064-101I1;0.958698!10609-108F6;0.936801!10048-101G3;0.123319!10781-110G7;0.83519!10181-103D1;0.000311443!10159-103A6;0.330202!10056-101H2;0.464547!10737-110B8;0.618067!10025-101D7;0.823872!10044-101F8;0.36603!10424-106D1;0.730103!10463-106H4;0.283567!10616-108G4;0.536559!10486-107A9;0.172708!10062-101H8;0.7791!10202-103F4;0.566548!10158-103A5;0.435744!10441-106E9;0.289513!10031-101E4;0.444027!10063-101H9;0.287253!10063-101H9;0.139036!11763-123H8;0.735523!11765-123I1;0.644222!11768-123I4;0.929232!10807-111A6;0.407779!10790-110H7;0.860402!10798-110I6;0.679682!10786-110H3;0.943707!10591-108D6;0.636541!10593-108D8;0.641911!10590-108D5;0.269245!10026-101D8;0.916229!10096-102C6;0.161394!10168-103B6;0.0686735!10154-103A1;0.32393!10209-103G2;0.163014!10061-101H7;0.767615!10027-101D9;0.543648!10043-101F7;0.513067!10783-110G9;0.563789!10028-101E1;0.813728!10060-101H6;0.905832!10203-103F5;0.881955!10059-101H5;0.911612!10047-101G2;0.83575!10029-101E2;0.550964!10058-101H4;0.891328!10418-106C4;0.807252!10492-107B6;0.987668!10694-109G1;0.563367!10797-110I5;0.049866!10057-101H3;0.451391!10100-102D1;0.996436!10055-101H1;0.702258!10204-103F6;0.711595!10191-103E2;0.613787!10563-108A5;0.546704
|name=7-TSTCWCG,CNhs12352,BestGuess:TGIF1_si_HM09(0.672507845977532),T:1788.0(57.36%),B:20574.9(46.20%),P:1e-35
|name=7-TSTCWCG,CNhs12352,BestGuess:TGIF1_si_HM09(0.672507845977532),T:1788.0(57.36%),B:20574.9(46.20%),P:1e-35
|tomtom_result=Pax2#MA0067.1;0;0.00286735;1.36486;1;7;TGTCACG;AGTCACGG;+!TYE7#MA0409.1;-2;0.01716;8.16818;1;5;TGTCACG;TCACGTG;-
}}
}}

Latest revision as of 13:36, 7 September 2012

Full Name: 7-TSTCWCG,CNhs12352,BestGuess:TGIF1_si_HM09(0.672507845977532),T:1788.0(57.36%),B:20574.9(46.20%),P:1e-35

Motif matrix
POACGT
11.788312.91.7881471.524
2134.1783.144868.9681.788
3277.141.788307.5361201.536
41.7881056.708627.588101.916
5920.821.7881.788863.604
6455.941176.504153.7681.788
71.788110.8561339.212336.144

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Pax2#MA0067.100.002867351.3648617TGTCACGAGTCACGG+
TYE7#MA0409.1-20.017168.1681815TGTCACGTCACGTG-
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