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MacroAPE 1083:Motif TGTANC: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;2480!02;0;0;2480;0!03;0;0;0;2480!04;2480;0;0;0!05;620;620;620;620!06;0;2480;0;0 |macroape_1083_sample_pvalues=11376-118A8;0.548304!1...")
 
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G3;0.110178!10493-107B7;0.0694272!10494-107B8;0.924257!10850-111F4;0.391261!10851-111F5;0.574313!10852-111F6;0.950315!10853-111F7;0.982876!10854-111F8;0.980511!10855-111F9;0.90566!10856-111G1;0.4412!10847-111F1;0.555765!10846-111E9;0.628177!10848-111F2;0.986755!10845-111E8;0.605799!10857-111G2;0.390386!10858-111G3;0.256066!10156-103A3;0.648701!11901-125F2;0.647426!11902-125F3;0.875744!11903-125F4;0.724491!10689-109F5;0.955458!10648-109A9;0.661012!10784-110H1;0.258309!10744-110C6;0.826337!10772-110F7;0.595934!10474-106I6;0.541871!10600-108E6;0.715505!10684-109E9;0.250682!12226-129F3;0.119307!12227-129F4;0.803751!10508-107D4;0.233549!10539-107G8;0.968324!10607-108F4;0.40641!10555-107I6;0.84732!10774-110F9;0.593465!10637-108I7;0.364644!10663-109C6;0.838216!10728-110A8;0.0658482!10729-110A9;0.34141!10430-106D7;0.279275!10730-110B1;0.884482!10813-111B3;0.924601!10812-111B2;0.00293955!10037-101F1;0.307739!10172-103C1;0.625423!10163-103B1;0.773941!10076-102A4;0.602239!10073-102A1;0.686201!10036-101E9;0.640847!10195-103E6;0.659599!10277-104E7;0.70677!10434-106E2;0.775187!10550-107I1;0.620884!10545-107H5;0.630254!10544-107H4;0.689905!10704-109H2;0.809428!10510-107D6;0.00372199!10558-107I9;0.348072!10020-101D2;0.700266!10732-110B3;0.747098!10049-101G4;0.508173!10698-109G5;0.736457!10437-106E5;0.410658!10417-106C3;0.409753!10035-101E8;0.859538!10171-103B9;0.66517!10157-103A4;0.79569!10034-101E7;0.633426!10072-101I9;0.652512!10199-103F1;0.646363!10200-103F2;0.101178!10697-109G4;0.290451!10723-110A3;0.259645!10179-103C8;0.992961!10160-103A7;0.518332!10180-103C9;0.568833!10162-103A9;0.89442!10021-101D3;0.916349!10840-111E3;0.999744!10706-109H4;0.802712!10033-101E6;0.755134!10032-101E5;0.861493!10490-107B4;0.623922!10439-106E7;0.85554!10022-101D4;0.305086!10176-103C5;0.712067!10469-106I1;0.583339!10067-101I4;0.264552!10411-106B6;0.439683!10471-106I3;0.289202!10030-101E3;0.79039!10475-106I7;0.743217!10787-110H4;0.579411!10477-106I9;0.0790144!10695-109G2;0.587319!11771-123I7;0.000257672!11772-123I8;0.524576!11773-123I9;0.314047!10093-102C3;0.155035!10442-106F1;0.27786!10442-106F1;0.890024!10201-103F3;0.861112!10639-108I9;0.0754565!11843-124H7;0.434021!11841-124H5;0.392266!10693-109F9;0.195754!10436-106E4;0.612789!10483-107A6;0.564535!10282-104F3;0.654221!10023-101D5;0.172089!10066-101I3;0.28566!10065-101I2;0.423182!10800-110I8;0.999879!10610-108F7;0.633824!10841-111E4;0.995908!10541-107H1;0.814205!10842-111E5;0.532013!10562-108A4;0.542657!10024-101D6;0.357111!10064-101I1;0.895275!10609-108F6;0.678446!10048-101G3;0.726889!10781-110G7;0.255703!10181-103D1;0.513565!10159-103A6;0.899769!10056-101H2;0.981334!10737-110B8;0.952228!10025-101D7;0.363071!10044-101F8;0.450089!10424-106D1;0.518689!10463-106H4;0.521355!10616-108G4;0.886777!10486-107A9;0.641447!10062-101H8;0.786671!10202-103F4;0.888277!10158-103A5;0.62365!10441-106E9;0.720316!10031-101E4;0.891746!10063-101H9;0.698293!10063-101H9;0.675229!11763-123H8;0.418172!11765-123I1;0.198289!11768-123I4;0.338271!10807-111A6;0.157821!10790-110H7;0.762538!10798-110I6;0.347858!10786-110H3;0.936484!10591-108D6;0.218579!10593-108D8;0.188035!10590-108D5;0.170429!10026-101D8;0.453358!10096-102C6;0.619589!10168-103B6;0.57773!10154-103A1;0.953349!10209-103G2;0.71162!10061-101H7;0.771647!10027-101D9;0.94963!10043-101F7;0.187467!10783-110G9;0.192514!10028-101E1;0.216974!10060-101H6;0.843111!10203-103F5;0.48848!10059-101H5;0.64545!10047-101G2;0.675643!10029-101E2;0.257903!10058-101H4;0.691654!10418-106C4;0.853168!10492-107B6;0.33765!10694-109G1;0.976208!10797-110I5;0.00405849!10057-101H3;0.947212!10100-102D1;0.823541!10055-101H1;0.678685!10204-103F6;0.961274!10191-103E2;0.479908!10563-108A5;0.659497
|name=motif_TGTANC
|name=motif_TGTANC
|tomtom_result=NFIL3#MA0025.1;3;0.010813;5.14701;1;6;TGTAAC;TTATGTAACGT;+!ovo#MA0126.1;0;0.0180784;8.60532;1;6;TGTAAC;AGTAACAGT;+!prd#MA0239.1;0;0.0180784;8.60532;1;6;TGTAAC;AGTAACAGT;+!so#MA0246.1;-1;0.0186008;8.854;1;5;TGTAAC;GTATCA;-
}}
}}

Latest revision as of 13:44, 7 September 2012

Full Name: motif_TGTANC

Motif matrix
POACGT
010002480
020024800
030002480
042480000
05620620620620
060248000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

NFIL3#MA0025.130.0108135.1470116TGTAACTTATGTAACGT+
ovo#MA0126.100.01807848.6053216TGTAACAGTAACAGT+
prd#MA0239.100.01807848.6053216TGTAACAGTAACAGT+
so#MA0246.1-10.01860088.85415TGTAACGTATCA-