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MacroAPE 1083:Motif494: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;56183!02;0;56183;0;0!03;0;56183;0;0!04;0;56183;0;0!05;0;44873;0;11310!06;13756;35797;6630;0!07;56183;0;0;0 |macroape_1083_sample_pva...")
 
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51!10788-110H5;0.219361!10792-110H9;0.147649!10765-110E9;0.127741!10829-111D1;0.405091!10830-111D2;0.139657!10831-111D3;0.493475!10832-111D4;0.207962!10833-111D5;0.116852!10764-110E8;0.16633!10770-110F5;0.310792!10399-106A3;0.10935!10400-106A4;0.123709!10405-106A9;0.157323!10834-111D6;0.0968163!10835-111D7;0.102763!10836-111D8;0.274959!10837-111D9;0.254569!10699-109G6;0.110451!10802-111A1;0.309397!10796-110I4;0.378882!10010-101C1;0.156409!10810-111A9;0.377794!10421-106C7;0.234469!10708-109H6;0.156525!12235-129G3;0.228475!12236-129G4;0.838771!12237-129G5;0.884613!10167-103B5;0.546695!10151-102I7;0.359921!10428-106D5;0.336436!10795-110I3;0.773187!10805-111A4;0.278575!10052-101G7;0.762482!10189-103D9;0.224934!10589-108D4;0.753681!10425-106D2;0.171897!10427-106D4;0.642483!10702-109G9;0.41813!10432-106D9;0.166678!10496-107C1;0.333489!10718-109I7;0.45699!10011-101C2;0.182457!10053-101G8;0.519551!10686-109F2;0.802025!10084-102B3;0.0593219!10012-101C3;0.546171!10085-102B4;0.646211!10482-107A5;0.395772!10419-106C5;0.87058!10080-102A8;0.442154!10760-110E4;0.345911!10709-109H7;0.166636!10710-109H8;0.464101!10703-109H1;0.645101!10719-109I8;0.425693!10642-109A3;0.649805!10177-103C6;0.661584!10164-103B2;0.552114!10173-103C2;0.321228!10166-103B4;0.422786!10083-102B2;0.165074!10188-103D8;0.23399!10552-107I3;0.340657!10553-107I4;0.311502!10013-101C4;0.332103!10536-107G5;0.346768!10618-108G6;0.286265!10423-106C9;0.196447!10785-110H2;0.237392!12238-129G6;0.407155!12239-129G7;0.916903!12240-129G8;0.988954!10416-106C2;0.579403!10801-110I9;0.306462!10766-110F1;0.254306!10824-111C5;0.314506!10825-111C6;0.458552!10826-111C7;0.447832!10454-106G4;0.470621!10409-106B4;0.261744!10638-108I8;0.219581!10636-108I6;0.148742!10513-107D9;0.287765!10420-106C6;0.106606!10082-102B1;0.205861!10014-101C5;0.981302!10070-101I7;0.989247!10452-106G2;0.935667!10453-106G3;0.973948!10449-106F8;0.907023!10042-101F6;0.801724!10069-101I6;0.838687!10193-103E4;0.427221!10631-108I1;0.803686!10438-106E6;0.318611!10488-107B2;0.362058!10196-103E7;0.844714!10071-101I8;0.987083!10071-101I8;0.720081!10041-101F5;0.492311!10451-106G1;0.393722!10450-106F9;0.672077!10604-108F1;0.31234!10605-108F2;0.489636!10606-108F3;0.328753!10603-108E9;0.363229!10497-107C2;0.521037!10448-106F7;0.599359!10643-109A4;0.755304!10426-106D3;0.229384!10431-106D8;0.475791!10197-103E8;0.64334!10443-106F2;0.890844!10815-111B5;0.0611986!10816-111B6;0.400687!10817-111B7;0.538691!10015-101C6;0.463045!10410-106B5;0.55922!10054-101G9;0.853!10758-110E2;0.284973!10711-109H9;0.254852!10040-101F4;0.0899745!10470-106I2;0.592914!10415-106C1;0.50034!10198-103E9;0.0801497!10614-108G2;0.642792!10612-108F9;0.190308!10549-107H9;0.422066!10615-108G3;0.287542!10487-107B1;0.779177!10433-106E1;0.379389!10688-109F4;0.737999!10444-106F3;0.620769!10444-106F3;0.872455!10485-107A8;0.857712!10413-106B8;0.31583!10175-103C4;0.888041!10161-103A8;0.934319!12131-128D7;0.60771!10624-108H3;0.249467!10712-109I1;0.739632!10205-103F7;0.399333!10206-103F8;0.29672!10207-103F9;0.375952!10050-101G5;0.301036!10051-101G6;0.708029!10016-101C7;0.306836!10046-101G1;0.300043!10778-110G4;0.302178!10633-108I3;0.723545!10818-111B8;0.160246!10819-111B9;0.174496!10820-111C1;0.192566!10484-107A7;0.203625!10808-111A7;0.38175!10169-103B7;0.224231!10153-102I9;0.560192!13425-144D5;0.329314!13433-144E4;0.828816!13437-144E8;0.975849!11904-125F5;0.974389!11905-125F6;0.50621!10039-101F3;0.896168!10791-110H8;0.518968!10017-101C8;0.0869239!10045-101F9;0.646614!10509-107D5;0.661462!10839-111E2;0.940421!10692-109F8;0.939795!10079-102A7;0.664404!10078-102A6;0.587331!10721-110A1;0.330941!10569-108B2;0.498038!10570-108B3;0.256004!10571-108B4;0.99555!10647-109A8;0.652333!10752-110D5;0.744899!10782-110G8;0.212475!10726-110A6;0.837312!10018-101C9;0.93706!10086-102B5;0.34112!10182-103D2;0.468951!10165-103B3;0.514466!10499-107C4;0.396175!10408-106B3;0.393168!10019-101D1;0.662348!10068-101I5;0.419636!10075-102A3;0.433122!10077-102A5;0.506453!10727-110A7;0.92616!10775-110G1;0.27044!10412-106B7;0.235298!12231-129F8;0.549695!12232-129F9;0.451569!12233-129G1;0.367277!12234-129G2;0.539183!10414-106B9;0.537378!10170-103B8;0.369061!10183-103D3;0.52785!10150-102I6;0.466159!10174-103C3;0.418569!10155-103A2;0.758311!10038-101F2;0.400258!10838-111E1;0.517322!10759-110E3;0.625299!10514-107E1;0.517686!10465-106H6;0.0549508!10691-109F7;0.0433075!10843-111E6;0.377348!10844-111E7;0.357317!11747-123G1;0.420933!11748-123G2;0.566376!11749-123G3;0.418797!11750-123G4;0.455952!11751-123G5;0.288964!11840-124H4;0.223813!11752-123G6;0.284701!11753-123G7;0.577227!11754-123G8;0.251611!11755-123G9;0.888383!11756-123H1;0.777888!11833-124G6;0.950844!11760-123H5;0.708559!11836-124G9;0.797497!11758-123H3;0.550499!11835-124G8;0.816858!11762-123H7;0.599871!11838-124H2;0.789495!11757-123H2;0.58755!11759-123H4;0.366511!11761-123H6;0.796099!11842-124H6;0.73653!11837-124H1;0.991331!10568-108B1;0.731963!13230-141I8;0.72799!13231-141I9;0.166507!10696-109G3;0.172987!10493-107B7;0.0670447!10494-107B8;0.520758!10850-111F4;0.948274!10851-111F5;0.713234!10852-111F6;0.357684!10853-111F7;0.229588!10854-111F8;0.882007!10855-111F9;0.354482!10856-111G1;0.580606!10847-111F1;0.577654!10846-111E9;0.317296!10848-111F2;0.371528!10845-111E8;0.842251!10857-111G2;0.485039!10858-111G3;0.182857!10156-103A3;0.866018!11901-125F2;0.41186!11902-125F3;0.676016!11903-125F4;0.7135!10689-109F5;0.65054!10648-109A9;0.220409!10784-110H1;0.383648!10744-110C6;0.210923!10772-110F7;0.524295!10474-106I6;0.0708079!10600-108E6;0.317571!10684-109E9;0.371618!12226-129F3;0.7835!12227-129F4;0.469067!10508-107D4;0.745582!10539-107G8;0.713761!10607-108F4;0.621932!10555-107I6;0.90245!10774-110F9;0.824966!10637-108I7;0.452462!10663-109C6;0.370643!10728-110A8;0.305843!10729-110A9;0.36135!10430-106D7;0.19193!10730-110B1;0.223882!10813-111B3;0.363039!10812-111B2;0.115978!10037-101F1;0.465556!10172-103C1;0.481046!10163-103B1;0.649964!10076-102A4;0.460981!10073-102A1;0.516359!10036-101E9;0.729482!10195-103E6;0.458993!10277-104E7;0.514106!10434-106E2;0.684204!10550-107I1;0.172689!10545-107H5;0.328393!10544-107H4;0.34598!10704-109H2;0.42085!10510-107D6;0.464934!10558-107I9;0.961887!10020-101D2;0.914837!10732-110B3;0.272939!10049-101G4;0.09512!10698-109G5;0.671672!10437-106E5;0.173907!10417-106C3;0.613743!10035-101E8;0.414253!10171-103B9;0.583619!10157-103A4;0.698133!10034-101E7;0.413679!10072-101I9;0.502966!10199-103F1;0.846517!10200-103F2;0.720303!10697-109G4;0.441722!10723-110A3;0.86353!10179-103C8;0.972908!10160-103A7;0.106851!10180-103C9;0.208233!10162-103A9;0.636826!10021-101D3;0.456029!10840-111E3;0.96202!10706-109H4;0.397027!10033-101E6;0.947426!10032-101E5;0.681851!10490-107B4;0.465397!10439-106E7;0.342059!10022-101D4;0.251689!10176-103C5;0.512355!10469-106I1;0.502399!10067-101I4;0.217476!10411-106B6;0.613029!10471-106I3;0.381927!10030-101E3;0.788588!10475-106I7;0.298031!10787-110H4;0.638428!10477-106I9;0.684421!10695-109G2;0.809877!11771-123I7;0.129126!11772-123I8;0.983787!11773-123I9;0.453712!10093-102C3;0.371332!10442-106F1;0.782438!10442-106F1;0.321884!10201-103F3;0.307438!10639-108I9;0.585379!11843-124H7;0.471002!11841-124H5;0.42926!10693-109F9;0.25383!10436-106E4;0.557719!10483-107A6;0.264329!10282-104F3;0.283118!10023-101D5;0.877195!10066-101I3;0.317826!10065-101I2;0.253382!10800-110I8;0.50644!10610-108F7;0.442225!10841-111E4;0.354664!10541-107H1;0.975899!10842-111E5;0.199237!10562-108A4;0.560224!10024-101D6;0.364805!10064-101I1;0.572853!10609-108F6;0.557167!10048-101G3;0.453225!10781-110G7;0.484302!10181-103D1;0.506565!10159-103A6;0.58073!10056-101H2;0.677921!10737-110B8;0.447685!10025-101D7;0.385448!10044-101F8;0.831423!10424-106D1;0.441085!10463-106H4;0.459245!10616-108G4;0.648993!10486-107A9;0.0919801!10062-101H8;0.257852!10202-103F4;0.810702!10158-103A5;0.904853!10441-106E9;0.699375!10031-101E4;0.770153!10063-101H9;0.393297!10063-101H9;0.537515!11763-123H8;0.885615!11765-123I1;0.208366!11768-123I4;0.142261!10807-111A6;0.305774!10790-110H7;0.386768!10798-110I6;0.361207!10786-110H3;0.553421!10591-108D6;0.333326!10593-108D8;0.77932!10590-108D5;0.465892!10026-101D8;0.360722!10096-102C6;0.547524!10168-103B6;0.849876!10154-103A1;0.885034!10209-103G2;0.52845!10061-101H7;0.669966!10027-101D9;0.536882!10043-101F7;0.988701!10783-110G9;0.608763!10028-101E1;0.482329!10060-101H6;0.519649!10203-103F5;0.637744!10059-101H5;0.737039!10047-101G2;0.586396!10029-101E2;0.866351!10058-101H4;0.644109!10418-106C4;0.60913!10492-107B6;0.202075!10694-109G1;0.254982!10797-110I5;0.105711!10057-101H3;0.429022!10100-102D1;0.751889!10055-101H1;0.346837!10204-103F6;0.645319!10191-103E2;0.282956!10563-108A5;0.40865
|name=motif494
|name=motif494
|tomtom_result=MZF1_1-4#MA0056.1;0;0.000170517;0.0811662;0.162332;6;TCCCCCA;TCCCCA;-!ADR1#MA0268.1;-1;0.00452758;2.15513;0.881192;6;TCCCCCA;ACCCCAC;+!Macho-1#MA0118.1;2;0.00468455;2.22985;0.881192;7;TCCCCCA;GAACCCCCA;-!MIG1#MA0337.1;-1;0.00496273;2.36226;0.881192;6;TCCCCCA;CCCCCGC;+!MSN2#MA0341.1;-1;0.00597459;2.84391;0.881192;5;TCCCCCA;CCCCT;-!MZF1_5-13#MA0057.1;1;0.00611423;2.91037;0.881192;7;TCCCCCA;TTCCCCCTAC;-!SP1#MA0079.2;4;0.00669971;3.18906;0.881192;6;TCCCCCA;CCCCGCCCCC;+!RDS2#MA0362.1;-1;0.00808923;3.85047;0.881192;6;TCCCCCA;CCCCGAG;-!OAF1#MA0348.1;2;0.0100477;4.7827;0.881192;7;TCCCCCA;TATCTCCGA;-!PPARG::RXRA#MA0065.2;7;0.0126439;6.01847;0.881192;7;TCCCCCA;TGACCTTTGCCCTAC;-!YPR022C#MA0436.1;-2;0.0141098;6.71626;0.881192;5;TCCCCCA;CCCCACG;+!EBF1#MA0154.1;-1;0.0141433;6.7322;0.881192;6;TCCCCCA;ACCCAAGGGA;+!Su(H)#MA0085.1;8;0.0146492;6.97304;0.881192;7;TCCCCCA;ATCTCGGTTCCCACAA;-!RREB1#MA0073.1;-1;0.0146794;6.98741;0.881192;6;TCCCCCA;CCCCAAACCACCCCCCCCCC;+!RPH1#MA0372.1;0;0.017151;8.16389;0.881192;7;TCCCCCA;ACCCCTAA;+!NHP10#MA0344.1;0;0.0178566;8.49975;0.881192;7;TCCCCCA;TCCCCGGC;-!MSN4#MA0342.1;-1;0.0184451;8.77989;0.881192;5;TCCCCCA;CCCCT;-!GIS1#MA0306.1;0;0.018807;8.95212;0.881192;7;TCCCCCA;ACCCCTAAA;+!ZMS1#MA0441.1;0;0.018807;8.95212;0.881192;7;TCCCCCA;TTCCCCGCA;+!USV1#MA0413.1;4;0.0194029;9.23576;0.881192;7;TCCCCCA;AAATTCCCCCTGAATTTGTG;+!INSM1#MA0155.1;1;0.01967;9.36293;0.881192;7;TCCCCCA;CGCCCCCTGACA;-!NFKB1#MA0105.1;6;0.0204371;9.72806;0.881192;5;TCCCCCA;GGGGAATCCCC;-
}}
}}

Latest revision as of 14:32, 7 September 2012

Full Name: motif494

Motif matrix
POACGT
0100056183
0205618300
0305618300
0405618300
05044873011310
06137563579766300
0756183000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
MZF1_1-4#MA0056.100.0001705170.08116620.1623326TCCCCCATCCCCA-
ADR1#MA0268.1-10.004527582.155130.8811926TCCCCCAACCCCAC+
Macho-1#MA0118.120.004684552.229850.8811927TCCCCCAGAACCCCCA-
MIG1#MA0337.1-10.004962732.362260.8811926TCCCCCACCCCCGC+
MSN2#MA0341.1-10.005974592.843910.8811925TCCCCCACCCCT-
MZF1_5-13#MA0057.110.006114232.910370.8811927TCCCCCATTCCCCCTAC-
SP1#MA0079.240.006699713.189060.8811926TCCCCCACCCCGCCCCC+
RDS2#MA0362.1-10.008089233.850470.8811926TCCCCCACCCCGAG-
OAF1#MA0348.120.01004774.78270.8811927TCCCCCATATCTCCGA-
PPARG::RXRA#MA0065.270.01264396.018470.8811927TCCCCCATGACCTTTGCCCTAC-
YPR022C#MA0436.1-20.01410986.716260.8811925TCCCCCACCCCACG+
EBF1#MA0154.1-10.01414336.73220.8811926TCCCCCAACCCAAGGGA+
Su(H)#MA0085.180.01464926.973040.8811927TCCCCCAATCTCGGTTCCCACAA-
RREB1#MA0073.1-10.01467946.987410.8811926TCCCCCACCCCAAACCACCCCCCCCCC+
RPH1#MA0372.100.0171518.163890.8811927TCCCCCAACCCCTAA+
NHP10#MA0344.100.01785668.499750.8811927TCCCCCATCCCCGGC-
MSN4#MA0342.1-10.01844518.779890.8811925TCCCCCACCCCT-
GIS1#MA0306.100.0188078.952120.8811927TCCCCCAACCCCTAAA+
ZMS1#MA0441.100.0188078.952120.8811927TCCCCCATTCCCCGCA+
USV1#MA0413.140.01940299.235760.8811927TCCCCCAAAATTCCCCCTGAATTTGTG+
INSM1#MA0155.110.019679.362930.8811927TCCCCCACGCCCCCTGACA-
NFKB1#MA0105.160.02043719.728060.8811925TCCCCCAGGGGAATCCCC-
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