FFCP PHASE1:Hg19::chr2:106227025..106227040,-: Difference between revisions
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|id=chr2:106227025..106227040,-
|short_description=p1@LOC285000
|description=CAGE_peak_1_at_LOC285000_5end
|association_with_transcript=-9bp_to_NR_038891,uc002tdf.2...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=285000 | |EntrezGene=285000 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_NR_038891,uc002tdf.2_5end | |||
|cluster_id=chr2:106227025..106227040,- | |||
|coexpression_cluster_id=C610 | |||
|description=CAGE_peak_1_at_LOC285000_5end | |||
|id=chr2:106227025..106227040,- | |||
|ontology_enrichment_celltype=CL:0000148!5.49e-55!10;CL:0000541!5.49e-55!10;CL:0000147!2.75e-39!14;CL:0000710!1.72e-27!20;CL:0002567!1.43e-21!3;CL:0000075!2.45e-20!27;CL:0002566!6.47e-17!1;CL:0002077!1.30e-16!33;CL:0000325!4.99e-14!39;CL:0000333!1.05e-12!41;CL:0000133!7.01e-09!59;CL:0000221!2.26e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.53e-88;10!CL:0000147;3.90e-63;14!CL:0000710;2.49e-44;20!CL:0002567;9.10e-34;3!CL:0000075;6.19e-33;27!CL:0002566;3.15e-26;1!CL:0002077;1.58e-24;34!CL:0000149;1.64e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,3.53e-88,10;CL:0000541,3.53e-88,10;CL:0000147,3.90e-63,14;CL:0000710,2.49e-44,20;CL:0002567,7.70e-34,3;CL:0000075,6.19e-33,27;CL:0002077,3.22e-26,34;CL:0002566,3.58e-26,1;CL:0000333,8.71e-21,41;CL:0000133,1.04e-14,59;CL:0000221,3.78e-12,72;CL:0000149,1.59e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000133;3.40e-08;59!CL:0000221;6.07e-07;72 | |||
|ontology_enrichment_disease=DOID:1909!6.27e-32!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;2.42e-50;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.42e-50,2 | |||
|ontology_enrichment_uberon=UBERON:0002022!3.07e-16!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.31e-07;15!UBERON:0007376;1.31e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.31e-07,15;UBERON:0007376,1.31e-07,15;UBERON:0007383,1.31e-07,15 | |||
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|short_description=p1@LOC285000 | |||
}} | }} |
Latest revision as of 04:52, 16 September 2015
Short description: | p1@LOC285000 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC285000_5end |
Coexpression cluster: | C610_melanoma_Melanocyte_migratory_mycosis_cerebellum_epithelioid_retina |
Association with transcript: | -9bp_to_NR_038891, uc002tdf.2_5end |
EntrezGene: | LOC285000 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 3.53e-88 | 10 |
melanoblast | 3.53e-88 | 10 |
pigment cell | 3.90e-63 | 14 |
neurecto-epithelial cell | 2.49e-44 | 20 |
light melanocyte | 7.70e-34 | 3 |
columnar/cuboidal epithelial cell | 6.19e-33 | 27 |
ecto-epithelial cell | 3.22e-26 | 34 |
dark melanocyte | 3.58e-26 | 1 |
migratory neural crest cell | 8.71e-21 | 41 |
neurectodermal cell | 1.04e-14 | 59 |
ectodermal cell | 3.78e-12 | 72 |
visual pigment cell | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.31e-07 | 15 |
outer epithelium | 1.31e-07 | 15 |
enveloping layer of ectoderm | 1.31e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.42e-50 | 2 |