FFCP PHASE1:Hg19::chr2:128293277..128293316,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:128293277..128293316,+
|short_description=p1@MYO7B
|description=CAGE_peak_1_at_MYO7B_5end
|association_with_transcript=-61bp_to_ENST00000272666,ENST0000038...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4648 | |EntrezGene=4648 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7607 | |HGNC=7607 | ||
|TSSclassifier=strong | |||
|UniProt=F8WBZ4,C9J6C0,Q6PIF6 | |UniProt=F8WBZ4,C9J6C0,Q6PIF6 | ||
|association_with_transcript=-61bp_to_ENST00000272666,ENST00000389524,ENST00000428314,NM_001080527,uc002top.2_5end | |||
|cluster_id=chr2:128293277..128293316,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_MYO7B_5end | |||
|id=chr2:128293277..128293316,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;3.11e-08;1!UBERON:0001045;3.58e-08;1 | |||
|ontology_enrichment_disease=DOID:3119!5.03e-09!14;DOID:4929!1.49e-08!2;DOID:3493!3.14e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:4929;7.36e-14;2!DOID:3119;9.11e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,6.89e-14,2;DOID:3119,8.94e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0005409!6.93e-24!35;UBERON:0000160!5.70e-21!27;UBERON:0000059!7.56e-17!11;UBERON:0004921!1.29e-15!129;UBERON:0004185!1.29e-15!129;UBERON:0001007!4.68e-13!155;UBERON:0001555!4.68e-13!155;UBERON:0007026!4.68e-13!155;UBERON:0004907!1.19e-12!5;UBERON:0004119!2.06e-11!169;UBERON:0000925!2.06e-11!169;UBERON:0006595!2.06e-11!169;UBERON:0001155!8.37e-11!9;UBERON:0001052!3.13e-09!4;UBERON:0000077!2.86e-08!130;UBERON:0003127!3.38e-08!2;UBERON:0005172!3.19e-07!55;UBERON:0005173!3.19e-07!55;UBERON:0005177!6.83e-07!107;UBERON:0000466!8.85e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.44e-47;22!UBERON:0000160;2.78e-44;17!UBERON:0004921;7.13e-28;33!UBERON:0000059;2.50e-22;11!UBERON:0002108;2.80e-22;4!UBERON:0004907;5.34e-13;5!UBERON:0001155;1.16e-12;9!UBERON:0002114;7.34e-10;2!UBERON:0006947;1.03e-09;3!UBERON:0004054;1.03e-09;3!UBERON:0001555;1.30e-09;54!UBERON:0001007;3.22e-09;81!UBERON:0001154;3.58e-08;1!UBERON:0001153;3.58e-08;1!UBERON:0009854;3.58e-08;1!UBERON:0001301;4.11e-08;1!UBERON:0001052;7.36e-08;4!UBERON:0001000;1.06e-07;1!UBERON:0004913;1.06e-07;1!UBERON:0003703;1.06e-07;1!UBERON:0005352;1.06e-07;1!UBERON:0001174;1.06e-07;1!UBERON:0004914;1.06e-07;1!UBERON:0005904;1.70e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.72e-44,17;UBERON:0005409,8.20e-42,25;UBERON:0000059,2.50e-22,11;UBERON:0002108,2.73e-22,4;UBERON:0004907,5.34e-13,5;UBERON:0001155,1.16e-12,9;UBERON:0004921,2.36e-11,118;UBERON:0001007,5.38e-10,145;UBERON:0001555,5.38e-10,145;UBERON:0007026,5.38e-10,145;UBERON:0002114,7.18e-10,2;UBERON:0006947,1.07e-09,3;UBERON:0004054,1.07e-09,3;UBERON:0004119,9.43e-09,160;UBERON:0000925,9.43e-09,160;UBERON:0006595,9.43e-09,160;UBERON:0001154,3.58e-08,1;UBERON:0001153,3.58e-08,1;UBERON:0001045,3.58e-08,1;UBERON:0001301,4.11e-08,1;UBERON:0001052,7.36e-08,4;UBERON:0004913,9.94e-08,1;UBERON:0003703,9.94e-08,1;UBERON:0001174,9.94e-08,1;UBERON:0004914,9.94e-08,1;UBERON:0001000,1.14e-07,1;UBERON:0005352,1.14e-07,1;UBERON:0005904,1.75e-07,4 | |||
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| ||
|short_description=p1@MYO7B | |||
}} | }} |
Latest revision as of 20:46, 16 September 2015
Short description: | p1@MYO7B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYO7B_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -61bp_to_ENST00000272666, ENST00000389524, ENST00000428314, NM_001080527, uc002top.2_5end |
EntrezGene: | MYO7B |
HGNC: | 7607 |
UniProt: | F8WBZ4C9J6C0Q6PIF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.72e-44 | 17 |
gastrointestinal system | 8.20e-42 | 25 |
large intestine | 2.50e-22 | 11 |
small intestine | 2.73e-22 | 4 |
lower digestive tract | 5.34e-13 | 5 |
colon | 1.16e-12 | 9 |
subdivision of digestive tract | 2.36e-11 | 118 |
digestive system | 5.38e-10 | 145 |
digestive tract | 5.38e-10 | 145 |
primitive gut | 5.38e-10 | 145 |
duodenum | 7.18e-10 | 2 |
male genital duct | 1.07e-09 | 3 |
internal male genitalia | 1.07e-09 | 3 |
endoderm-derived structure | 9.43e-09 | 160 |
endoderm | 9.43e-09 | 160 |
presumptive endoderm | 9.43e-09 | 160 |
vermiform appendix | 3.58e-08 | 1 |
caecum | 3.58e-08 | 1 |
midgut | 3.58e-08 | 1 |
epididymis | 4.11e-08 | 1 |
rectum | 7.36e-08 | 4 |
hepatopancreatic ampulla | 9.94e-08 | 1 |
extrahepatic bile duct | 9.94e-08 | 1 |
common bile duct | 9.94e-08 | 1 |
duodenal papilla | 9.94e-08 | 1 |
vas deferens | 1.14e-07 | 1 |
spermatic cord | 1.14e-07 | 1 |
duct of male reproductive system | 1.75e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 6.89e-14 | 2 |
gastrointestinal system cancer | 8.94e-08 | 14 |