FFCP PHASE1:Mm9::chr12:60230744..60230805,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=217615 | |EntrezGene=217615 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=341 | |MCL_coexpression_id=341 | ||
|TSSclassifier=NA | |||
|UniProt=E9QN50,E9Q3S2,Q8R311,Q3TZZ3 | |UniProt=E9QN50,E9Q3S2,Q8R311,Q3TZZ3 | ||
|association_with_transcript=11bp_to_ENSMUST00000043421,ENSMUST00000069430,NM_001165254,NM_146034,uc007nqd.2,uc007nqe.2,uc007nqf.2,uc007nqg.2_5end | |association_with_transcript=11bp_to_ENSMUST00000043421,ENSMUST00000069430,NM_001165254,NM_146034,uc007nqd.2,uc007nqe.2,uc007nqf.2,uc007nqg.2_5end | ||
|cluster_id=chr12:60230744..60230805,+ | |||
|description=CAGE_peak_3_at_Ctage5_5end | |description=CAGE_peak_3_at_Ctage5_5end | ||
|id=chr12:60230744..60230805,+ | |id=chr12:60230744..60230805,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!4.21e-13!131;UBERON:0009142!4.21e-13!131;UBERON:0000926!1.26e-10!193;UBERON:0004120!1.26e-10!193;UBERON:0006603!1.26e-10!193;UBERON:0001048!1.53e-09!147;UBERON:0000077!1.78e-09!97;UBERON:0001041!8.71e-09!92;UBERON:0000949!8.83e-09!72;UBERON:0001264!3.22e-07!12;UBERON:0003922!3.22e-07!12;UBERON:0002114!3.22e-07!12;UBERON:0003923!3.22e-07!12;UBERON:0003924!3.22e-07!12;UBERON:0003921!3.22e-07!12;UBERON:0005177!3.35e-07!85;UBERON:0000468!3.67e-07!333;UBERON:0002100!4.35e-07!98;UBERON:0001045!5.69e-07!13 | |ontology_enrichment_uberon=UBERON:0003104!4.21e-13!131;UBERON:0009142!4.21e-13!131;UBERON:0000926!1.26e-10!193;UBERON:0004120!1.26e-10!193;UBERON:0006603!1.26e-10!193;UBERON:0001048!1.53e-09!147;UBERON:0000077!1.78e-09!97;UBERON:0001041!8.71e-09!92;UBERON:0000949!8.83e-09!72;UBERON:0001264!3.22e-07!12;UBERON:0003922!3.22e-07!12;UBERON:0002114!3.22e-07!12;UBERON:0003923!3.22e-07!12;UBERON:0003924!3.22e-07!12;UBERON:0003921!3.22e-07!12;UBERON:0005177!3.35e-07!85;UBERON:0000468!3.67e-07!333;UBERON:0002100!4.35e-07!98;UBERON:0001045!5.69e-07!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.07e-09,79;UBERON:0002100,2.41e-09,90;UBERON:0000949,7.23e-09,72;UBERON:0003104,2.73e-07,61;UBERON:0009142,2.73e-07,61;UBERON:0001264,3.19e-07,12 | |||
|phase1_expression=9.28863313207805,0.697950815278722,0.909998478779072,3.0246421130683,1.00179145989269,2.51818907867835,1.86890112476421,1.54947988129892,0.985521055061667,0.234064526321993,0.171217968225505,0.0797721589953364,2.05440875917447,1.22388563386596,0.333109761815663,0.809901069559304,0.699561878128147,2.36596624018678,2.05671650408608,1.69755860719212,11.9911039113008,0.397163804803541,0.522399578277871,4.47978783821539,3.44113921600755,1.14846392823004,1.7230479846363,1.50829862880122,3.23039813075836,2.77233142735924,0.886922042621219,0,0,0,12.9983228888074,6.81562045969819,8.16677425049476,2.92972141515835,9.37602413428561,7.85285615960697,1.17646297606203,2.73218193983378,4.36959317728038,8.3091899863881,9.0225468785368,6.9747765821439,0.782391344348039,0.65407546914134,1.75748946187577,1.55543919259427,1.39986421625363,4.31257693094915,0.503347818173209,1.45072428402269,1.34437519656986,1.80081605225163,6.30373567865265,7.21940929188419,1.41621522601718,1.05798195854407,0.633831403506179,1.0165335962074,0,0.449949858640699,0.988866362566974,0.7104801149461,0.898800331555214,0.768436610643109,4.04389488003063,2.97013064329719,2.94454945891935,0.571301968807607,0.441737081903227,1.34739879136449,1.24599112323707,0.919218786610021,2.20231761998777,4.21368215681119,4.30098293117482,1.31886287730194,1.00636407962651,1.56274011167028,0.837548997004143,3.37657566019008,2.44477196442896,1.76777151284201,2.27794689278565,0.745597783301202,2.19605960666234,3.02286240427142,13.3337664802772,17.2084775396277,15.6393406752783,39.3983329895607,46.1341256387845,97.6698613872192,61.0933227573121,9.54409806437123,3.89679006904303,3.88673531961374,8.45060518660083,5.13305909657271,2.54805239706646,0,3.24736561516821,1.52015919285059,1.51657333504435,77.4166704495227,7.76813650941515,15.5864246018066,4.51061849591953,6.39377504455497,6.91846491768175,8.89263579260473,13.9930561491489,16.8393232381765,8.89901883843746,38.6080282976164,4.42305275974937,16.3384518446883,14.3546986999256,16.9706338597328,9.31958806090611,4.39171195517321,6.49284791121711,13.2837668708468,4.91242010474273,2.39961092397363,7.75128385145695,4.34392854273986,1.37250180845588,1.63350657746724,3.30266208365325,5.37002460393694,3.1168206683934,2.27137768294861,7.43427356107309,21.397998944936,24.7668303265001,85.6498353457949,8.58794923553845,8.73627996847197,7.92273371143537,9.79581315932148,12.1785333480877,12.0426897067759,9.93238280333126,24.8355235909455,7.54487975264948,9.45530400839096,12.1406275673125,8.32943783224784,20.019401944243,20.1986256582857,28.1921526878883,7.16523360546575,6.31991868581911,5.91900186363845,7.10408748488982,5.59239585845855,4.69052119962192,5.76198596675248,4.49814997611899,6.49321964766433,7.86762275725629,6.0458825635106,4.82892122519315,11.4430035519826,10.3672705445493,14.4467368389604,25.9420190546738,26.3159977365598,21.2963611832319,31.404301989927,6.09840850835969,4.01327988279209,13.5471701023357,1.85115396664481,5.54549451391608,7.19933682767359,5.92790322081629,9.4791256572971,6.0042071838115,6.08722003560189,6.64340686162316,4.44687177754829,8.54539709920916,6.96347652144028,12.8676297498619,3.59527763461689,5.18731319699266,16.3295844068581,5.50036912763937,7.31190480702264,11.270773567308,12.4227309985642,13.5766741017338,17.8144982521409,22.7651533647326,61.7010418554737,57.6185331177846,60.7114046495259,50.3969466048153,0.667380422864376,2.35870794135844,1.79889689907883,5.68008339887808,8.44120059133459,11.4581633301639,15.8232875597946,65.3404963903393,11.8061407670875,43.1304619582064,30.5155577088173,16.5379966750717,25.2578877947112,20.0925103144542,92.6291561017665,20.1380977281599,4.16881105895066,4.4000543639347,4.92260748748046,7.04070744865506,14.573044397438,15.7108802984769,18.9279638422065,14.817703545982,10.85176979279,11.3212885746816,19.99132439532,14.3328534948693,19.8169210256671,1.50791283939272,2.71952841909355,45.7340773907704,54.9114125146418,3.85321415970701,4.10240903072711,7.37707254195039,59.8356097474364,2.2085575359138,3.12350995437311,3.23135096599198,2.86762557543062,4.90157082981267,3.96307143104365,4.45291771842384,2.92255857911312,5.13874111330481,5.78378369559253,18.3102709918667,6.05423052468668,9.28455668315384,12.0428189769951,234.958894861734,6.31229654002952,13.302236506449,106.373264982327,50.4966236826121,77.1662221339258,45.4833795976069,82.5221565913938,93.7588105151817,203.527672110665,250.896288408497,180.487200684327,33.703520969625,6.84232157318979,3.62204314591713,8.57348140126369,11.3497749531055,12.664186049747,16.4549020602121,7.61162372786498,9.62154003061212,3.81297727554876,44.3262080090473,38.0887244294819,41.8192865142395,19.7826393764351,18.5027133204862,19.0403443704271,12.5336759750836,6.11903496634682,1.87957968877638,6.81076664278634,5.74103034846106,1.31857919903284,1.77702496037333,0.686334519619568,0.849892149969277,2.6590775941495,1.24379976423981,26.7307773044232,6.01038387804157,11.3858901591035,11.0165447638237,17.7725051612298,16.3771922809633,24.0058536564981,16.2000773221658,26.175594198403,6.99920855775682,166.518935907296,1.12738587736838,8.52244312450679,5.79104716599842,6.02798683866548,5.29555276258697,7.60302564708502,10.4447942394721,7.42164993610516,7.34015410979976,4.34851417486811,8.92893019399383,15.4845449107807,5.87903124341476,19.001527075493,65.6100156037865,49.9484480912273,44.9019861805659,27.8853442886328,32.3440064512324,41.4972109286887,33.7596153481649,27.9288532829048,18.0297079368542,24.822655143205,16.7133970119644,52.8281793823442,0.443971906748129,0.0897138566094757,0,14.8755987404787,21.2081197259836,15.0184331899157,22.2943114242228,61.1917966923143,5.64751842617067,6.44455331110048,4.01026859407578,6.70227411140382,3.42541259885321,5.2877572817279,1.35004500046361,1.35096360967266,4.53142408984205,4.14208249401456,1.66059756134683,5.58634822761443,4.43907374960749,10.6966955510049,3.77303692730368,6.61836630420051,14.6682840349066,7.41726206060019,8.98573786857083,11.6240717411347,10.6461305953901,11.6948331659367,15.6381317474704,12.6769801761641,14.0716898941253,10.9547548995107,11.240779616651,13.3107362119956,11.5384052224926,12.217510371155,10.2860775715625,12.2458306249943,10.4911923576821,10.7556348307923,12.9870944973156,13.3691080468849,12.6220301282213,12.3642764375786,12.3581743599734,7.85599180320834,12.3380418849141,12.1160513321943,10.6400071224119,13.3245683419931,15.046715656529,10.9916654292696,15.9073493742878,19.9830080264917,19.3201215389532,21.838550492832,22.7230478908013 | |phase1_expression=9.28863313207805,0.697950815278722,0.909998478779072,3.0246421130683,1.00179145989269,2.51818907867835,1.86890112476421,1.54947988129892,0.985521055061667,0.234064526321993,0.171217968225505,0.0797721589953364,2.05440875917447,1.22388563386596,0.333109761815663,0.809901069559304,0.699561878128147,2.36596624018678,2.05671650408608,1.69755860719212,11.9911039113008,0.397163804803541,0.522399578277871,4.47978783821539,3.44113921600755,1.14846392823004,1.7230479846363,1.50829862880122,3.23039813075836,2.77233142735924,0.886922042621219,0,0,0,12.9983228888074,6.81562045969819,8.16677425049476,2.92972141515835,9.37602413428561,7.85285615960697,1.17646297606203,2.73218193983378,4.36959317728038,8.3091899863881,9.0225468785368,6.9747765821439,0.782391344348039,0.65407546914134,1.75748946187577,1.55543919259427,1.39986421625363,4.31257693094915,0.503347818173209,1.45072428402269,1.34437519656986,1.80081605225163,6.30373567865265,7.21940929188419,1.41621522601718,1.05798195854407,0.633831403506179,1.0165335962074,0,0.449949858640699,0.988866362566974,0.7104801149461,0.898800331555214,0.768436610643109,4.04389488003063,2.97013064329719,2.94454945891935,0.571301968807607,0.441737081903227,1.34739879136449,1.24599112323707,0.919218786610021,2.20231761998777,4.21368215681119,4.30098293117482,1.31886287730194,1.00636407962651,1.56274011167028,0.837548997004143,3.37657566019008,2.44477196442896,1.76777151284201,2.27794689278565,0.745597783301202,2.19605960666234,3.02286240427142,13.3337664802772,17.2084775396277,15.6393406752783,39.3983329895607,46.1341256387845,97.6698613872192,61.0933227573121,9.54409806437123,3.89679006904303,3.88673531961374,8.45060518660083,5.13305909657271,2.54805239706646,0,3.24736561516821,1.52015919285059,1.51657333504435,77.4166704495227,7.76813650941515,15.5864246018066,4.51061849591953,6.39377504455497,6.91846491768175,8.89263579260473,13.9930561491489,16.8393232381765,8.89901883843746,38.6080282976164,4.42305275974937,16.3384518446883,14.3546986999256,16.9706338597328,9.31958806090611,4.39171195517321,6.49284791121711,13.2837668708468,4.91242010474273,2.39961092397363,7.75128385145695,4.34392854273986,1.37250180845588,1.63350657746724,3.30266208365325,5.37002460393694,3.1168206683934,2.27137768294861,7.43427356107309,21.397998944936,24.7668303265001,85.6498353457949,8.58794923553845,8.73627996847197,7.92273371143537,9.79581315932148,12.1785333480877,12.0426897067759,9.93238280333126,24.8355235909455,7.54487975264948,9.45530400839096,12.1406275673125,8.32943783224784,20.019401944243,20.1986256582857,28.1921526878883,7.16523360546575,6.31991868581911,5.91900186363845,7.10408748488982,5.59239585845855,4.69052119962192,5.76198596675248,4.49814997611899,6.49321964766433,7.86762275725629,6.0458825635106,4.82892122519315,11.4430035519826,10.3672705445493,14.4467368389604,25.9420190546738,26.3159977365598,21.2963611832319,31.404301989927,6.09840850835969,4.01327988279209,13.5471701023357,1.85115396664481,5.54549451391608,7.19933682767359,5.92790322081629,9.4791256572971,6.0042071838115,6.08722003560189,6.64340686162316,4.44687177754829,8.54539709920916,6.96347652144028,12.8676297498619,3.59527763461689,5.18731319699266,16.3295844068581,5.50036912763937,7.31190480702264,11.270773567308,12.4227309985642,13.5766741017338,17.8144982521409,22.7651533647326,61.7010418554737,57.6185331177846,60.7114046495259,50.3969466048153,0.667380422864376,2.35870794135844,1.79889689907883,5.68008339887808,8.44120059133459,11.4581633301639,15.8232875597946,65.3404963903393,11.8061407670875,43.1304619582064,30.5155577088173,16.5379966750717,25.2578877947112,20.0925103144542,92.6291561017665,20.1380977281599,4.16881105895066,4.4000543639347,4.92260748748046,7.04070744865506,14.573044397438,15.7108802984769,18.9279638422065,14.817703545982,10.85176979279,11.3212885746816,19.99132439532,14.3328534948693,19.8169210256671,1.50791283939272,2.71952841909355,45.7340773907704,54.9114125146418,3.85321415970701,4.10240903072711,7.37707254195039,59.8356097474364,2.2085575359138,3.12350995437311,3.23135096599198,2.86762557543062,4.90157082981267,3.96307143104365,4.45291771842384,2.92255857911312,5.13874111330481,5.78378369559253,18.3102709918667,6.05423052468668,9.28455668315384,12.0428189769951,234.958894861734,6.31229654002952,13.302236506449,106.373264982327,50.4966236826121,77.1662221339258,45.4833795976069,82.5221565913938,93.7588105151817,203.527672110665,250.896288408497,180.487200684327,33.703520969625,6.84232157318979,3.62204314591713,8.57348140126369,11.3497749531055,12.664186049747,16.4549020602121,7.61162372786498,9.62154003061212,3.81297727554876,44.3262080090473,38.0887244294819,41.8192865142395,19.7826393764351,18.5027133204862,19.0403443704271,12.5336759750836,6.11903496634682,1.87957968877638,6.81076664278634,5.74103034846106,1.31857919903284,1.77702496037333,0.686334519619568,0.849892149969277,2.6590775941495,1.24379976423981,26.7307773044232,6.01038387804157,11.3858901591035,11.0165447638237,17.7725051612298,16.3771922809633,24.0058536564981,16.2000773221658,26.175594198403,6.99920855775682,166.518935907296,1.12738587736838,8.52244312450679,5.79104716599842,6.02798683866548,5.29555276258697,7.60302564708502,10.4447942394721,7.42164993610516,7.34015410979976,4.34851417486811,8.92893019399383,15.4845449107807,5.87903124341476,19.001527075493,65.6100156037865,49.9484480912273,44.9019861805659,27.8853442886328,32.3440064512324,41.4972109286887,33.7596153481649,27.9288532829048,18.0297079368542,24.822655143205,16.7133970119644,52.8281793823442,0.443971906748129,0.0897138566094757,0,14.8755987404787,21.2081197259836,15.0184331899157,22.2943114242228,61.1917966923143,5.64751842617067,6.44455331110048,4.01026859407578,6.70227411140382,3.42541259885321,5.2877572817279,1.35004500046361,1.35096360967266,4.53142408984205,4.14208249401456,1.66059756134683,5.58634822761443,4.43907374960749,10.6966955510049,3.77303692730368,6.61836630420051,14.6682840349066,7.41726206060019,8.98573786857083,11.6240717411347,10.6461305953901,11.6948331659367,15.6381317474704,12.6769801761641,14.0716898941253,10.9547548995107,11.240779616651,13.3107362119956,11.5384052224926,12.217510371155,10.2860775715625,12.2458306249943,10.4911923576821,10.7556348307923,12.9870944973156,13.3691080468849,12.6220301282213,12.3642764375786,12.3581743599734,7.85599180320834,12.3380418849141,12.1160513321943,10.6400071224119,13.3245683419931,15.046715656529,10.9916654292696,15.9073493742878,19.9830080264917,19.3201215389532,21.838550492832,22.7230478908013 | ||
|short_description=p3@Ctage5 | |short_description=p3@Ctage5 | ||
}} | }} |
Latest revision as of 17:06, 26 September 2015
Short description: | p3@Ctage5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ctage5_5end |
Coexpression cluster: | MCL_coexpression_mm9:341 |
Association with transcript: | 11bp_to_ENSMUST00000043421, ENSMUST00000069430, NM_001165254, NM_146034, uc007nqd.2, uc007nqe.2, uc007nqf.2, uc007nqg.2_5end |
EntrezGene: | Ctage5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk region element | 1.07e-09 | 79 |
trunk | 2.41e-09 | 90 |
endocrine system | 7.23e-09 | 72 |
mesenchyme | 2.73e-07 | 61 |
entire embryonic mesenchyme | 2.73e-07 | 61 |
pancreas | 3.19e-07 | 12 |