FFCP PHASE1:Mm9::chr18:70085196..70085225,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=381175 | |EntrezGene=381175 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=297 | |MCL_coexpression_id=297 | ||
|TSSclassifier=NA | |||
|UniProt=Q8BVC4 | |UniProt=Q8BVC4 | ||
|association_with_transcript=0bp_to_ENSMUST00000135428,NM_201362,uc008fnw.1,uc008fnx.1_5end | |association_with_transcript=0bp_to_ENSMUST00000135428,NM_201362,uc008fnw.1,uc008fnx.1_5end | ||
|cluster_id=chr18:70085196..70085225,+ | |||
|description=CAGE_peak_2_at_Ccdc68_5end | |description=CAGE_peak_2_at_Ccdc68_5end | ||
|id=chr18:70085196..70085225,+ | |id=chr18:70085196..70085225,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.51e-07!25 | |ontology_enrichment_celltype=CL:0000066!4.51e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.91e-08,25;CL:0002563,6.20e-07,9;CL:0002251,6.20e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.67e-22!130;UBERON:0000925!2.67e-22!130;UBERON:0006595!2.67e-22!130;UBERON:0001007!2.94e-21!128;UBERON:0001555!2.94e-21!128;UBERON:0007026!2.94e-21!128;UBERON:0004921!5.38e-20!126;UBERON:0004185!5.38e-20!126;UBERON:0000160!5.46e-17!43;UBERON:0005409!2.09e-16!59;UBERON:0000344!2.19e-09!15;UBERON:0000481!8.61e-09!230;UBERON:0001242!3.75e-08!13;UBERON:0000060!3.75e-08!13;UBERON:0001262!3.75e-08!13;UBERON:0004786!3.75e-08!13;UBERON:0000077!7.43e-08!97;UBERON:0005178!1.62e-07!17;UBERON:0005181!1.62e-07!17;UBERON:0002224!1.62e-07!17;UBERON:0000915!1.62e-07!17;UBERON:0008947!1.62e-07!17;UBERON:0003258!1.62e-07!17 | |ontology_enrichment_uberon=UBERON:0004119!2.67e-22!130;UBERON:0000925!2.67e-22!130;UBERON:0006595!2.67e-22!130;UBERON:0001007!2.94e-21!128;UBERON:0001555!2.94e-21!128;UBERON:0007026!2.94e-21!128;UBERON:0004921!5.38e-20!126;UBERON:0004185!5.38e-20!126;UBERON:0000160!5.46e-17!43;UBERON:0005409!2.09e-16!59;UBERON:0000344!2.19e-09!15;UBERON:0000481!8.61e-09!230;UBERON:0001242!3.75e-08!13;UBERON:0000060!3.75e-08!13;UBERON:0001262!3.75e-08!13;UBERON:0004786!3.75e-08!13;UBERON:0000077!7.43e-08!97;UBERON:0005178!1.62e-07!17;UBERON:0005181!1.62e-07!17;UBERON:0002224!1.62e-07!17;UBERON:0000915!1.62e-07!17;UBERON:0008947!1.62e-07!17;UBERON:0003258!1.62e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.49e-20,118;UBERON:0000925,8.49e-20,118;UBERON:0006595,8.49e-20,118;UBERON:0000160,1.62e-19,31;UBERON:0005409,5.91e-19,47;UBERON:0001007,1.16e-18,116;UBERON:0001555,1.16e-18,116;UBERON:0007026,1.16e-18,116;UBERON:0004921,2.71e-17,114;UBERON:0000344,1.33e-11,15;UBERON:0001242,5.08e-10,13;UBERON:0001262,5.08e-10,13;UBERON:0004786,5.08e-10,13;UBERON:0005178,6.90e-09,17;UBERON:0005181,6.90e-09,17;UBERON:0002224,6.90e-09,17;UBERON:0000915,6.90e-09,17;UBERON:0008947,6.90e-09,17;UBERON:0003258,6.90e-09,17;UBERON:0004923,2.67e-08,24;UBERON:0000485,4.54e-08,11;UBERON:0003350,6.20e-07,9;UBERON:0004808,6.20e-07,9;UBERON:0001277,6.20e-07,9 | |||
|phase1_expression=8.48788889655408,12.2141392673776,11.8299802241279,19.9626379462508,20.0358291978539,8.72972213941827,10.7461814673942,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,16.3192271249275,11.6998733344257,8.6134794617253,10.7690499039769,11.2045040996662,33.8241686632346,19.9103802510345,5.54326276638262,0,0,0,3.75507105676657,2.32728503501889,4.08338712524738,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.183546752161682,0,0,0,0,0,0,0,0,0,0,1.14613375975503,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.453429360640713,4.92769630792852,0.860423876981386,0.679971333707751,3.2382191498269,0.649776417447669,0.448026887097336,2.80888840263504,0,0,0,7.32385782838739,0,0,0,14.5048997477513,14.4415123320806,13.1436355703844,6.8510327831436,0,0.29688427812965,0,0.304465478312141,0.691846491768175,0.150722640552623,0.470354828542819,0.502666365318702,14.5845030963281,0.722996784599558,0,0.323533699894818,0,0,24.2309289583559,0,0,13.2837668708468,0,0,0,0.149790639404823,0,0,0,0,0,0,0.509196819251581,0.497627882440372,1.0108910337347,0.420883711772948,0.260240885925407,0.229902104433473,0.900310649026746,0.150704817835715,0.204109497453984,0.384341160854549,0.374806898238915,0.776110112217047,0,0.567318240503458,1.23165786914764,0.657587197282725,0.834141747676794,0.696504333044333,1.23469281844766,0,0,0,0,0.414251545071004,0.938104239924385,0.540186184383045,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0.536546802799238,0.583826711835847,0.16455984991348,0.656669856316381,0.810688095458557,0.584799949701329,1.75640092232841,0.402619256281115,0.420579897128254,0,35.0243909962826,11.3713743665324,0,1.16118335930219,2.70621668776396,3.63030344322017,3.33567065767305,4.1849637744763,10.9141684155238,7.5761519173045,8.79673230800943,12.9321706826748,11.6978452271472,11.6846523125049,18.8040103390984,16.7278669533668,0.189667900953082,0.799739588268102,1.1270773567308,1.62921062276251,0.775809948670503,2.45475369616115,3.85742876457969,9.29943932271494,8.63493003127561,8.02081565491703,2.07516838961004,0.333690211432188,0,0,1.01430060694251,0.964708639009667,1.01850340712568,1.72617682470486,0.810676133875177,1.37280706594041,5.75072826109418,2.23284568601102,6.55279113540577,4.2938409251009,0.717589654087649,1.92977408545347,7.7596339869974,0.37898282354097,1.95557971730431,1.69745085775188,3.05097322775053,5.02518772325447,8.56957107189649,8.58588050574315,5.51723004371669,5.97954662051692,6.218735977642,7.53771247692395,6.73471429276993,9.54683786637976,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0,0.488660878060728,0.329940245945071,7.96470830039777,0.728341908464944,0,1.50884063804718,0.295301892880773,2.76691633149535,4.39328098385976,4.36240475373007,7.12994756769443,6.63677191665214,8.4334886859999,9.28219889233682,2.04263763452273,1.26042765821917,1.29358683782755,1.28602221018955,1.77340233642274,1.24858172321449,0.987294123612726,0.304464949114599,7.04015124191131,7.83778662196135,3.08739757276947,1.97863503529776,1.29171541356724,2.41251699712623,2.50681922406587,5.74493149107714,14.2825609948627,0,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0,21.9574242143476,0.632671987162271,2.64315307264903,4.21220829205025,5.01811910434725,5.45906409365444,7.41753905116514,8.01738520535759,12.8260411572175,41.8656363732491,23.6108938973032,0,0,0.165458490457098,0,0.258319646955462,0,0.352071715937262,0.39061315453185,0.314578033277133,0.483168241652012,0,0.632022241256357,0.608175645870493,0.410843828659309,0.25984164595559,0.895133478337407,0.596044064343795,0.961563596159751,0.443068581523732,1.11063094942962,0.609654453239999,0.302478555410522,0.487289403698762,0.384847366561318,0.584384510907845,1.36038230169127,1.77588762699252,0.807424709485281,3.18980771091749,3.28422309854724,1.50145980360946,0,1.2862102744744,1.50471631210609,0,0,0,0.343706364687375,0,0,0,0,0,0,0.518936737920883,0.798049746802062,0.341467211508268,0.486213434136588,0.838452650511929,0.367687016900028,0.888986911206461,0.824140228955577,0.962757628775446,1.51618327058278,1.77435509923168,0.943131706930381,1.12369808963859,1.28050304809739,1.37845125493472,1.42888107384922,1.39061191133827,0.192909220463705,1.64834360321323,1.47198920134397,1.71434626192708,1.24233064311536,0.953744759789284,0.581385666529314,1.31753132581463,0.592302255241736,0.914639864363863,0.789209134313529,0.543216455383447,0.561142271657738,1.42362021749009,1.18205378850676,2.04615521584845,0.929621047115796,1.54325288784913,0.499621155875892,1.16965804222704,2.79332370262788,0.382576664137687,2.42650561031467,0.695603506861264 | |phase1_expression=8.48788889655408,12.2141392673776,11.8299802241279,19.9626379462508,20.0358291978539,8.72972213941827,10.7461814673942,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,16.3192271249275,11.6998733344257,8.6134794617253,10.7690499039769,11.2045040996662,33.8241686632346,19.9103802510345,5.54326276638262,0,0,0,3.75507105676657,2.32728503501889,4.08338712524738,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.183546752161682,0,0,0,0,0,0,0,0,0,0,1.14613375975503,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.453429360640713,4.92769630792852,0.860423876981386,0.679971333707751,3.2382191498269,0.649776417447669,0.448026887097336,2.80888840263504,0,0,0,7.32385782838739,0,0,0,14.5048997477513,14.4415123320806,13.1436355703844,6.8510327831436,0,0.29688427812965,0,0.304465478312141,0.691846491768175,0.150722640552623,0.470354828542819,0.502666365318702,14.5845030963281,0.722996784599558,0,0.323533699894818,0,0,24.2309289583559,0,0,13.2837668708468,0,0,0,0.149790639404823,0,0,0,0,0,0,0.509196819251581,0.497627882440372,1.0108910337347,0.420883711772948,0.260240885925407,0.229902104433473,0.900310649026746,0.150704817835715,0.204109497453984,0.384341160854549,0.374806898238915,0.776110112217047,0,0.567318240503458,1.23165786914764,0.657587197282725,0.834141747676794,0.696504333044333,1.23469281844766,0,0,0,0,0.414251545071004,0.938104239924385,0.540186184383045,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0.536546802799238,0.583826711835847,0.16455984991348,0.656669856316381,0.810688095458557,0.584799949701329,1.75640092232841,0.402619256281115,0.420579897128254,0,35.0243909962826,11.3713743665324,0,1.16118335930219,2.70621668776396,3.63030344322017,3.33567065767305,4.1849637744763,10.9141684155238,7.5761519173045,8.79673230800943,12.9321706826748,11.6978452271472,11.6846523125049,18.8040103390984,16.7278669533668,0.189667900953082,0.799739588268102,1.1270773567308,1.62921062276251,0.775809948670503,2.45475369616115,3.85742876457969,9.29943932271494,8.63493003127561,8.02081565491703,2.07516838961004,0.333690211432188,0,0,1.01430060694251,0.964708639009667,1.01850340712568,1.72617682470486,0.810676133875177,1.37280706594041,5.75072826109418,2.23284568601102,6.55279113540577,4.2938409251009,0.717589654087649,1.92977408545347,7.7596339869974,0.37898282354097,1.95557971730431,1.69745085775188,3.05097322775053,5.02518772325447,8.56957107189649,8.58588050574315,5.51723004371669,5.97954662051692,6.218735977642,7.53771247692395,6.73471429276993,9.54683786637976,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0,0.488660878060728,0.329940245945071,7.96470830039777,0.728341908464944,0,1.50884063804718,0.295301892880773,2.76691633149535,4.39328098385976,4.36240475373007,7.12994756769443,6.63677191665214,8.4334886859999,9.28219889233682,2.04263763452273,1.26042765821917,1.29358683782755,1.28602221018955,1.77340233642274,1.24858172321449,0.987294123612726,0.304464949114599,7.04015124191131,7.83778662196135,3.08739757276947,1.97863503529776,1.29171541356724,2.41251699712623,2.50681922406587,5.74493149107714,14.2825609948627,0,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0,21.9574242143476,0.632671987162271,2.64315307264903,4.21220829205025,5.01811910434725,5.45906409365444,7.41753905116514,8.01738520535759,12.8260411572175,41.8656363732491,23.6108938973032,0,0,0.165458490457098,0,0.258319646955462,0,0.352071715937262,0.39061315453185,0.314578033277133,0.483168241652012,0,0.632022241256357,0.608175645870493,0.410843828659309,0.25984164595559,0.895133478337407,0.596044064343795,0.961563596159751,0.443068581523732,1.11063094942962,0.609654453239999,0.302478555410522,0.487289403698762,0.384847366561318,0.584384510907845,1.36038230169127,1.77588762699252,0.807424709485281,3.18980771091749,3.28422309854724,1.50145980360946,0,1.2862102744744,1.50471631210609,0,0,0,0.343706364687375,0,0,0,0,0,0,0.518936737920883,0.798049746802062,0.341467211508268,0.486213434136588,0.838452650511929,0.367687016900028,0.888986911206461,0.824140228955577,0.962757628775446,1.51618327058278,1.77435509923168,0.943131706930381,1.12369808963859,1.28050304809739,1.37845125493472,1.42888107384922,1.39061191133827,0.192909220463705,1.64834360321323,1.47198920134397,1.71434626192708,1.24233064311536,0.953744759789284,0.581385666529314,1.31753132581463,0.592302255241736,0.914639864363863,0.789209134313529,0.543216455383447,0.561142271657738,1.42362021749009,1.18205378850676,2.04615521584845,0.929621047115796,1.54325288784913,0.499621155875892,1.16965804222704,2.79332370262788,0.382576664137687,2.42650561031467,0.695603506861264 | ||
|short_description=p2@Ccdc68 | |short_description=p2@Ccdc68 | ||
}} | }} |
Latest revision as of 16:51, 1 October 2015
Short description: | p2@Ccdc68 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ccdc68_5end |
Coexpression cluster: | MCL_coexpression_mm9:297 |
Association with transcript: | 0bp_to_ENSMUST00000135428, NM_201362, uc008fnw.1, uc008fnx.1_5end |
EntrezGene: | Ccdc68 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.91e-08 | 25 |
intestinal epithelial cell | 6.20e-07 | 9 |
epithelial cell of alimentary canal | 6.20e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 8.49e-20 | 118 |
endoderm | 8.49e-20 | 118 |
presumptive endoderm | 8.49e-20 | 118 |
intestine | 1.62e-19 | 31 |
gastrointestinal system | 5.91e-19 | 47 |
digestive system | 1.16e-18 | 116 |
digestive tract | 1.16e-18 | 116 |
primitive gut | 1.16e-18 | 116 |
subdivision of digestive tract | 2.71e-17 | 114 |
mucosa | 1.33e-11 | 15 |
intestinal mucosa | 5.08e-10 | 13 |
wall of intestine | 5.08e-10 | 13 |
gastrointestinal system mucosa | 5.08e-10 | 13 |
thoracic cavity element | 6.90e-09 | 17 |
thoracic segment organ | 6.90e-09 | 17 |
thoracic cavity | 6.90e-09 | 17 |
thoracic segment of trunk | 6.90e-09 | 17 |
respiratory primordium | 6.90e-09 | 17 |
endoderm of foregut | 6.90e-09 | 17 |
organ component layer | 2.67e-08 | 24 |
simple columnar epithelium | 4.54e-08 | 11 |
epithelium of mucosa | 6.20e-07 | 9 |
gastrointestinal system epithelium | 6.20e-07 | 9 |
intestinal epithelium | 6.20e-07 | 9 |