FFCP PHASE1:Mm9::chr16:22857509..22857535,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70573 | |EntrezGene=70573 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=166 | |MCL_coexpression_id=166 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=81bp_to_uc007ysn.1_5end | |association_with_transcript=81bp_to_uc007ysn.1_5end | ||
|cluster_id=chr16:22857509..22857535,- | |||
|description=CAGE_peak_4_at_Tbccd1_5end | |description=CAGE_peak_4_at_Tbccd1_5end | ||
|id=chr16:22857509..22857535,- | |id=chr16:22857509..22857535,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.03e-11,9;CL:0002251,7.03e-11,9;CL:0000066,7.38e-10,25;CL:0000223,1.25e-08,20;CL:0000239,1.03e-07,6;CL:0000677,1.03e-07,6;CL:0000584,1.03e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.15e-18!43;UBERON:0005409!5.08e-18!59;UBERON:0004119!8.52e-14!130;UBERON:0000925!8.52e-14!130;UBERON:0006595!8.52e-14!130;UBERON:0001007!8.56e-14!128;UBERON:0001555!8.56e-14!128;UBERON:0007026!8.56e-14!128;UBERON:0004921!5.96e-13!126;UBERON:0004185!5.96e-13!126;UBERON:0002107!9.05e-11!22;UBERON:0007499!9.05e-11!22;UBERON:0006925!9.05e-11!22;UBERON:0009497!9.05e-11!22;UBERON:0000015!9.05e-11!22;UBERON:0002423!9.05e-11!22;UBERON:0006235!9.05e-11!22;UBERON:0008835!9.05e-11!22;UBERON:0003894!9.05e-11!22;UBERON:0004161!9.05e-11!22;UBERON:0008836!9.05e-11!22;UBERON:0009854!1.01e-09!23;UBERON:0009856!1.01e-09!23;UBERON:0000344!2.25e-09!15;UBERON:0002365!9.47e-09!25;UBERON:0002330!9.47e-09!25;UBERON:0001242!1.70e-08!13;UBERON:0000060!1.70e-08!13;UBERON:0001262!1.70e-08!13;UBERON:0004786!1.70e-08!13;UBERON:0002108!5.29e-08!16;UBERON:0004923!3.73e-07!24;UBERON:0003929!6.47e-07!55;UBERON:0005172!8.51e-07!49;UBERON:0005173!8.51e-07!49;UBERON:0002417!8.51e-07!49;UBERON:0000916!8.51e-07!49 | |ontology_enrichment_uberon=UBERON:0000160!4.15e-18!43;UBERON:0005409!5.08e-18!59;UBERON:0004119!8.52e-14!130;UBERON:0000925!8.52e-14!130;UBERON:0006595!8.52e-14!130;UBERON:0001007!8.56e-14!128;UBERON:0001555!8.56e-14!128;UBERON:0007026!8.56e-14!128;UBERON:0004921!5.96e-13!126;UBERON:0004185!5.96e-13!126;UBERON:0002107!9.05e-11!22;UBERON:0007499!9.05e-11!22;UBERON:0006925!9.05e-11!22;UBERON:0009497!9.05e-11!22;UBERON:0000015!9.05e-11!22;UBERON:0002423!9.05e-11!22;UBERON:0006235!9.05e-11!22;UBERON:0008835!9.05e-11!22;UBERON:0003894!9.05e-11!22;UBERON:0004161!9.05e-11!22;UBERON:0008836!9.05e-11!22;UBERON:0009854!1.01e-09!23;UBERON:0009856!1.01e-09!23;UBERON:0000344!2.25e-09!15;UBERON:0002365!9.47e-09!25;UBERON:0002330!9.47e-09!25;UBERON:0001242!1.70e-08!13;UBERON:0000060!1.70e-08!13;UBERON:0001262!1.70e-08!13;UBERON:0004786!1.70e-08!13;UBERON:0002108!5.29e-08!16;UBERON:0004923!3.73e-07!24;UBERON:0003929!6.47e-07!55;UBERON:0005172!8.51e-07!49;UBERON:0005173!8.51e-07!49;UBERON:0002417!8.51e-07!49;UBERON:0000916!8.51e-07!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.13e-22,31;UBERON:0002107,1.66e-16,22;UBERON:0007499,1.66e-16,22;UBERON:0006925,1.66e-16,22;UBERON:0009497,1.66e-16,22;UBERON:0000015,1.66e-16,22;UBERON:0002423,1.66e-16,22;UBERON:0006235,1.66e-16,22;UBERON:0008835,1.66e-16,22;UBERON:0003894,1.66e-16,22;UBERON:0004161,1.66e-16,22;UBERON:0008836,1.66e-16,22;UBERON:0000344,2.10e-16,15;UBERON:0009854,1.58e-15,23;UBERON:0009856,1.58e-15,23;UBERON:0001242,9.75e-15,13;UBERON:0001262,9.75e-15,13;UBERON:0004786,9.75e-15,13;UBERON:0002365,8.23e-14,25;UBERON:0002330,8.23e-14,25;UBERON:0001007,1.51e-13,116;UBERON:0001555,1.51e-13,116;UBERON:0007026,1.51e-13,116;UBERON:0004119,4.45e-13,118;UBERON:0000925,4.45e-13,118;UBERON:0006595,4.45e-13,118;UBERON:0005409,8.73e-13,47;UBERON:0004921,2.39e-12,114;UBERON:0003929,7.97e-12,55;UBERON:0003350,7.03e-11,9;UBERON:0004808,7.03e-11,9;UBERON:0001277,7.03e-11,9;UBERON:0001264,9.12e-11,12;UBERON:0005177,1.25e-09,79;UBERON:0000490,3.53e-09,66;UBERON:0004923,1.41e-08,24;UBERON:0000485,1.79e-08,11;UBERON:0000949,2.12e-08,72;UBERON:0005172,6.09e-08,49;UBERON:0005173,6.09e-08,49;UBERON:0002417,6.09e-08,49;UBERON:0000916,6.09e-08,49;UBERON:0002100,6.72e-08,90;UBERON:0005911,9.40e-08,69 | |||
|phase1_expression=0.480446541314382,5.23463111459042,3.18499467572675,3.93203474698879,3.50627010962443,3.69334398206158,3.73780224952841,0.258246646883153,0,0,0,0,1.88320802924326,0.699363219351979,0.333109761815663,0.202475267389826,0,0.157731082679119,0.274228867211478,0,0.255129870453209,0.496454756004426,0.261199789138935,2.23989391910769,3.21172993494038,1.72269589234506,3.87685796543167,4.30942465371778,3.99049180858385,3.2763916868791,4.43461021310609,0.635030673459631,0,0,4.04392267651784,4.48833542467929,3.26670970019791,0.837063261473815,0.7813353445238,0,1.17646297606203,0,0.971020706062307,0.503587271902309,1.31790010585369,0.734187008646726,0,0,0.219686182734472,0.388859798148567,0.419959264876088,0,0.167782606057736,0,0.336093799142464,0,0,0.515672092277442,0.202316460859598,0,0,0,0.889294796111139,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0,0.131886287730194,0,0,0,0.56276261003168,0,0,0,0,0.151452386666368,0.151143120213571,1.15945795480671,6.0229671388697,0.679971333707751,8.63525106620507,12.3457519315057,8.51251085484938,2.24711072210803,0.852151612890289,0.779358013808606,0.70667914902068,0.281686839553361,0,0,0,0.432982082022428,0,0,3.4255163915718,0.776813650941515,0,0.173485326766136,0,0.461230994512117,0.452167921657868,0.23517741427141,0.125666591329675,0.494389935468748,0.289198713839823,0.884610551949874,0.161766849947409,0,0,0,0.292780797011547,0,2.55457055208591,0.11981512450592,1.19980546198682,0.127070227073065,0.299581278809645,0,0,0.173824320192276,0.255715457330331,0,0,0.203678727700633,0.124406970610093,1.0108910337347,0,0.260240885925407,0,0,0.150704817835715,0.204109497453984,0.2562274405697,0.187403449119458,0,0.646703978798527,0.567318240503458,0,0,0,0.696504333044333,0,0,0,0.257347907114715,0.568326998791185,0.414251545071004,0,0.36012412292203,0.23674473558521,0,0.462801338662135,0.697601834251224,0,0.233530684734339,0,0.32833492815819,0.0810688095458557,0.146199987425332,0,0,0,0.205809224758569,1.98251269790279,1.58670339998127,0.213288250535234,0.464473343720877,2.06187938115349,2.42020229548011,3.33567065767305,2.28270751335071,2.37264530772256,2.14108641141214,2.26201687920243,2.78539060857611,1.9496408711912,0.898819408654221,3.45820879799511,2.78797782556114,0,0.571242563048644,0,1.22190796707189,0.193952487167626,0.98190147846446,0.758838445491087,1.91893192373483,3.92496819603437,1.72756029490521,7.41131567717872,0,0.786235980452812,0.449724224769707,1.21716072833102,3.61765739628625,3.05551022137704,5.75392274901621,2.2698931748505,5.21666685057355,4.31304619582064,3.72140947668503,5.30464044294753,6.56705082662491,8.25228102200796,11.5786445127208,0.184753190166605,0.37898282354097,0,0.339490171550376,0,0,0.238043640886014,0,0,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,1.08781136763742,0.491764273019036,0,0,0,0.655739781506702,0.252470927204373,0,0,0,0,0.445597348164788,0,0,0,0.395287777946524,0,0.425820255624806,0,0.162886959353576,0.494910368917606,5.30980553359851,1.45668381692989,3.62788268357701,8.29862350925952,4.72483028609236,5.53383266299069,1.03371317267288,3.63533729477506,2.13898427030833,4.42451461110142,0,2.06271086496374,0.340439605753788,0.36012218806262,0.129358683782755,0.214337035031592,0,0.535106452806212,0.329098041204242,0.608929898229199,0.469343416127421,0.21183207086382,0,0.32977250588296,0,0.0603129249281559,0,0,2.33184669303881,0,0,0.412773735926445,0.555583582109135,0.376736914009382,0.136694227721025,0.915112692826091,0,0,0.276399947608848,0.954670618015114,0.790839983952838,0.813277868507395,0.648032044930808,0.627264888043406,0.87345025498471,0.134864346384821,0.495920734352016,0.523511883968059,3.11075935900303,0,0,0.149516546043979,0.330916980914195,0,0.129159823477731,0.506868376472335,0.352071715937262,0,0.209718688851422,0,0.576060012515731,0.632022241256357,0,0.102710957164827,0,0.358053391334963,0.198681354781265,0.120195449519969,0.443068581523732,0.201932899896295,0.15241361331,0.302478555410522,0.194915761479505,0.481059208201647,0.467507608726276,0,0,0,0.335769232728157,0.19318959403219,0,0.183151624267265,0,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0.838452650511929,0.551530525350042,0.44449345560323,0.412070114477788,0.64183841918363,0.758091635291392,1.2673964994512,0.565879024158229,0.936415074698824,0.704276676453562,0.976402972245426,0.476293691283074,0.811190281613988,0.38581844092741,1.64834360321323,0.883193520806384,1.02860775715625,1.4198064492747,1.43061713968393,1.0174249164263,0.658765662907314,0.930760686808441,0.182927972872773,0,0.950628796921032,0,0.593175090620871,0.492522411877817,0,0.77468420592983,0.385813221962283,0,0.701794825336225,0.859484216193193,0,0,0 | |phase1_expression=0.480446541314382,5.23463111459042,3.18499467572675,3.93203474698879,3.50627010962443,3.69334398206158,3.73780224952841,0.258246646883153,0,0,0,0,1.88320802924326,0.699363219351979,0.333109761815663,0.202475267389826,0,0.157731082679119,0.274228867211478,0,0.255129870453209,0.496454756004426,0.261199789138935,2.23989391910769,3.21172993494038,1.72269589234506,3.87685796543167,4.30942465371778,3.99049180858385,3.2763916868791,4.43461021310609,0.635030673459631,0,0,4.04392267651784,4.48833542467929,3.26670970019791,0.837063261473815,0.7813353445238,0,1.17646297606203,0,0.971020706062307,0.503587271902309,1.31790010585369,0.734187008646726,0,0,0.219686182734472,0.388859798148567,0.419959264876088,0,0.167782606057736,0,0.336093799142464,0,0,0.515672092277442,0.202316460859598,0,0,0,0.889294796111139,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0,0.131886287730194,0,0,0,0.56276261003168,0,0,0,0,0.151452386666368,0.151143120213571,1.15945795480671,6.0229671388697,0.679971333707751,8.63525106620507,12.3457519315057,8.51251085484938,2.24711072210803,0.852151612890289,0.779358013808606,0.70667914902068,0.281686839553361,0,0,0,0.432982082022428,0,0,3.4255163915718,0.776813650941515,0,0.173485326766136,0,0.461230994512117,0.452167921657868,0.23517741427141,0.125666591329675,0.494389935468748,0.289198713839823,0.884610551949874,0.161766849947409,0,0,0,0.292780797011547,0,2.55457055208591,0.11981512450592,1.19980546198682,0.127070227073065,0.299581278809645,0,0,0.173824320192276,0.255715457330331,0,0,0.203678727700633,0.124406970610093,1.0108910337347,0,0.260240885925407,0,0,0.150704817835715,0.204109497453984,0.2562274405697,0.187403449119458,0,0.646703978798527,0.567318240503458,0,0,0,0.696504333044333,0,0,0,0.257347907114715,0.568326998791185,0.414251545071004,0,0.36012412292203,0.23674473558521,0,0.462801338662135,0.697601834251224,0,0.233530684734339,0,0.32833492815819,0.0810688095458557,0.146199987425332,0,0,0,0.205809224758569,1.98251269790279,1.58670339998127,0.213288250535234,0.464473343720877,2.06187938115349,2.42020229548011,3.33567065767305,2.28270751335071,2.37264530772256,2.14108641141214,2.26201687920243,2.78539060857611,1.9496408711912,0.898819408654221,3.45820879799511,2.78797782556114,0,0.571242563048644,0,1.22190796707189,0.193952487167626,0.98190147846446,0.758838445491087,1.91893192373483,3.92496819603437,1.72756029490521,7.41131567717872,0,0.786235980452812,0.449724224769707,1.21716072833102,3.61765739628625,3.05551022137704,5.75392274901621,2.2698931748505,5.21666685057355,4.31304619582064,3.72140947668503,5.30464044294753,6.56705082662491,8.25228102200796,11.5786445127208,0.184753190166605,0.37898282354097,0,0.339490171550376,0,0,0.238043640886014,0,0,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,1.08781136763742,0.491764273019036,0,0,0,0.655739781506702,0.252470927204373,0,0,0,0,0.445597348164788,0,0,0,0.395287777946524,0,0.425820255624806,0,0.162886959353576,0.494910368917606,5.30980553359851,1.45668381692989,3.62788268357701,8.29862350925952,4.72483028609236,5.53383266299069,1.03371317267288,3.63533729477506,2.13898427030833,4.42451461110142,0,2.06271086496374,0.340439605753788,0.36012218806262,0.129358683782755,0.214337035031592,0,0.535106452806212,0.329098041204242,0.608929898229199,0.469343416127421,0.21183207086382,0,0.32977250588296,0,0.0603129249281559,0,0,2.33184669303881,0,0,0.412773735926445,0.555583582109135,0.376736914009382,0.136694227721025,0.915112692826091,0,0,0.276399947608848,0.954670618015114,0.790839983952838,0.813277868507395,0.648032044930808,0.627264888043406,0.87345025498471,0.134864346384821,0.495920734352016,0.523511883968059,3.11075935900303,0,0,0.149516546043979,0.330916980914195,0,0.129159823477731,0.506868376472335,0.352071715937262,0,0.209718688851422,0,0.576060012515731,0.632022241256357,0,0.102710957164827,0,0.358053391334963,0.198681354781265,0.120195449519969,0.443068581523732,0.201932899896295,0.15241361331,0.302478555410522,0.194915761479505,0.481059208201647,0.467507608726276,0,0,0,0.335769232728157,0.19318959403219,0,0.183151624267265,0,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0.838452650511929,0.551530525350042,0.44449345560323,0.412070114477788,0.64183841918363,0.758091635291392,1.2673964994512,0.565879024158229,0.936415074698824,0.704276676453562,0.976402972245426,0.476293691283074,0.811190281613988,0.38581844092741,1.64834360321323,0.883193520806384,1.02860775715625,1.4198064492747,1.43061713968393,1.0174249164263,0.658765662907314,0.930760686808441,0.182927972872773,0,0.950628796921032,0,0.593175090620871,0.492522411877817,0,0.77468420592983,0.385813221962283,0,0.701794825336225,0.859484216193193,0,0,0 | ||
|short_description=p4@Tbccd1 | |short_description=p4@Tbccd1 | ||
}} | }} |
Latest revision as of 18:46, 1 October 2015
Short description: | p4@Tbccd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tbccd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:166 |
Association with transcript: | 81bp_to_uc007ysn.1_5end |
EntrezGene: | Tbccd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.03e-11 | 9 |
epithelial cell of alimentary canal | 7.03e-11 | 9 |
epithelial cell | 7.38e-10 | 25 |
endodermal cell | 1.25e-08 | 20 |
brush border epithelial cell | 1.03e-07 | 6 |
gut absorptive cell | 1.03e-07 | 6 |
enterocyte | 1.03e-07 | 6 |