FFCP PHASE1:Mm9::chrX:19941798..19941809,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19889 | |EntrezGene=19889 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=533 | |MCL_coexpression_id=533 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=53bp_to_ENSMUST00000133619_5end | |association_with_transcript=53bp_to_ENSMUST00000133619_5end | ||
|cluster_id=chrX:19941798..19941809,+ | |||
|description=CAGE_peak_3_at_Rp2h_5end | |description=CAGE_peak_3_at_Rp2h_5end | ||
|id=chrX:19941798..19941809,+ | |id=chrX:19941798..19941809,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,4.38e-10,3;CL:0000239,1.93e-08,6;CL:0000677,1.93e-08,6;CL:0000584,1.93e-08,6;CL:0000075,3.11e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!3.35e-10!24;UBERON:0005409!3.56e-10!59;UBERON:0000344!2.62e-08!15;UBERON:0001242!6.29e-07!13;UBERON:0000060!6.29e-07!13;UBERON:0001262!6.29e-07!13;UBERON:0004786!6.29e-07!13 | |ontology_enrichment_uberon=UBERON:0004923!3.35e-10!24;UBERON:0005409!3.56e-10!59;UBERON:0000344!2.62e-08!15;UBERON:0001242!6.29e-07!13;UBERON:0000060!6.29e-07!13;UBERON:0001262!6.29e-07!13;UBERON:0004786!6.29e-07!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.59e-19,15;UBERON:0004923,8.47e-19,24;UBERON:0001242,2.80e-14,13;UBERON:0001262,2.80e-14,13;UBERON:0004786,2.80e-14,13;UBERON:0000160,6.99e-12,31;UBERON:0005409,2.75e-11,47;UBERON:0000331,4.38e-10,3;UBERON:0002116,4.38e-10,3;UBERON:0001204,4.38e-10,3;UBERON:0001168,4.38e-10,3;UBERON:0002465,1.82e-09,3;UBERON:0002108,1.18e-07,4;UBERON:0001962,3.05e-07,2;UBERON:0001961,3.05e-07,2;UBERON:0001744,3.05e-07,2;UBERON:0001155,3.51e-07,2;UBERON:0000059,3.51e-07,2 | |||
|phase1_expression=0.480446541314382,2.09385244583617,5.0049916332849,1.51232105653415,3.00537437967808,0.839396359559449,0.700837921786577,0,0.140788722151667,0,0,0,0,0,0,0.809901069559304,0.699561878128147,0.630924330716475,0.411343300817216,0,0,0.496454756004426,0.522399578277871,2.3998863419011,3.21172993494038,2.29692785646008,4.30761996159075,2.80112602491656,6.08074942260396,1.76421090831952,3.10422714917427,0,0,0,0,0.166234645358492,0.408338712524738,0,3.906676722619,0.523523743973798,2.35292595212406,0.683045484958446,1.45653105909346,0.377690453926732,0.304130793658544,0.183546752161682,0,0,0,0,0,0,0.167782606057736,0,0,0,0,1.03134418455488,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0.151452386666368,0.529000920747499,0,0,0,0,0,0,0.280888840263504,0.511290967734173,0.259786004602869,0,0,0,0,0,0,0,0,0.34255163915718,1.03575153458869,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,1.23597483867187,0.578397427679647,0,0.161766849947409,0.220841518460394,0,3.72783522436244,0,0.209446706813455,2.04365644166873,0.359445373517761,1.19980546198682,0.508280908292259,0.149790639404823,0,0,0.173824320192276,0,0,0.162241263067758,0.305518091550949,0.248813941220186,0.252722758433675,0,0.260240885925407,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0.556094498451196,0,1.02891068203972,0,0,0.257347907114715,0.568326998791185,0,0,0.180062061461015,0,0.393528463494808,0.462801338662135,0,0,0.233530684734339,0.16455984991348,0,0.162137619091711,0.292399974850665,0,0.536825675041487,0.210289948564127,0.102904612379284,3.63460661282178,0.528901133327089,0,0.232236671860439,0.128867461322093,0,0,0,0.474529061544512,0.494096864172033,0,0,0,0.898819408654221,1.29682829924817,1.39398891278057,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0.280543279561274,0.189709611372772,0.295220295959204,0.156998727841375,0,0.296452627087149,0.166845105716094,0.393117990226406,0,0.202860121388503,0.482354319504834,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0,1.4473305640901,0,0,0.325929952884052,0,0,0.335012514883631,0,0.390267295715598,0.315270288212382,0.221464689648775,0.797273843287435,0.491589944147214,0.172684981865896,0.723245292907558,0,0.54390568381871,0,0,0,0.117211686592203,0.327869890753351,0,0,0,0,0.477937595905104,0.222798674082394,0,0,0,0.395287777946524,0.321321316421807,0.283880170416537,0.178065603667255,0.651547837414304,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0,0,0.775284879504663,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0.23467170806371,0.21183207086382,0.220528398054962,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0.874442509889552,0.18542530201051,1.36696704638282,0,0.370389054739423,1.13021074202815,0.820165366326151,0.457556346413045,0,0,0.276399947608848,0.954670618015114,0.316335993581135,0.813277868507395,0.432021363287205,0.209088296014469,0.655087691238533,0.809186078308924,0.661227645802687,0.523511883968059,1.94422459937689,0,0,0.149516546043979,0,0.194451188344048,0,0,0.117357238645754,0.5208175393758,0.104859344425711,0,0.288030006257865,0,0,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.302478555410522,0.0974578807397524,0.288635524920988,0.116876902181569,0,0,0.179427713218951,0.167884616364078,0.19318959403219,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.486213434136588,0.209613162627982,0.183843508450014,0,0.412070114477788,0,0,0.25347929989024,0,0.187283014939765,0.192075457214608,0.17230640686684,0,0.115884325944855,0.38581844092741,0,0.294397840268795,0,0,0.238436189947321,0.290692833264657,0.282328141245992,0,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0,0.214871054048298,0,0.220591419119515,0.463735671240843 | |phase1_expression=0.480446541314382,2.09385244583617,5.0049916332849,1.51232105653415,3.00537437967808,0.839396359559449,0.700837921786577,0,0.140788722151667,0,0,0,0,0,0,0.809901069559304,0.699561878128147,0.630924330716475,0.411343300817216,0,0,0.496454756004426,0.522399578277871,2.3998863419011,3.21172993494038,2.29692785646008,4.30761996159075,2.80112602491656,6.08074942260396,1.76421090831952,3.10422714917427,0,0,0,0,0.166234645358492,0.408338712524738,0,3.906676722619,0.523523743973798,2.35292595212406,0.683045484958446,1.45653105909346,0.377690453926732,0.304130793658544,0.183546752161682,0,0,0,0,0,0,0.167782606057736,0,0,0,0,1.03134418455488,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0.15279824777681,0,0,0.186399445825301,0.151452386666368,0.529000920747499,0,0,0,0,0,0,0.280888840263504,0.511290967734173,0.259786004602869,0,0,0,0,0,0,0,0,0.34255163915718,1.03575153458869,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,1.23597483867187,0.578397427679647,0,0.161766849947409,0.220841518460394,0,3.72783522436244,0,0.209446706813455,2.04365644166873,0.359445373517761,1.19980546198682,0.508280908292259,0.149790639404823,0,0,0.173824320192276,0,0,0.162241263067758,0.305518091550949,0.248813941220186,0.252722758433675,0,0.260240885925407,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0.556094498451196,0,1.02891068203972,0,0,0.257347907114715,0.568326998791185,0,0,0.180062061461015,0,0.393528463494808,0.462801338662135,0,0,0.233530684734339,0.16455984991348,0,0.162137619091711,0.292399974850665,0,0.536825675041487,0.210289948564127,0.102904612379284,3.63460661282178,0.528901133327089,0,0.232236671860439,0.128867461322093,0,0,0,0.474529061544512,0.494096864172033,0,0,0,0.898819408654221,1.29682829924817,1.39398891278057,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0.280543279561274,0.189709611372772,0.295220295959204,0.156998727841375,0,0.296452627087149,0.166845105716094,0.393117990226406,0,0.202860121388503,0.482354319504834,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0,1.4473305640901,0,0,0.325929952884052,0,0,0.335012514883631,0,0.390267295715598,0.315270288212382,0.221464689648775,0.797273843287435,0.491589944147214,0.172684981865896,0.723245292907558,0,0.54390568381871,0,0,0,0.117211686592203,0.327869890753351,0,0,0,0,0.477937595905104,0.222798674082394,0,0,0,0.395287777946524,0.321321316421807,0.283880170416537,0.178065603667255,0.651547837414304,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0,0,0.775284879504663,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0.23467170806371,0.21183207086382,0.220528398054962,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0.874442509889552,0.18542530201051,1.36696704638282,0,0.370389054739423,1.13021074202815,0.820165366326151,0.457556346413045,0,0,0.276399947608848,0.954670618015114,0.316335993581135,0.813277868507395,0.432021363287205,0.209088296014469,0.655087691238533,0.809186078308924,0.661227645802687,0.523511883968059,1.94422459937689,0,0,0.149516546043979,0,0.194451188344048,0,0,0.117357238645754,0.5208175393758,0.104859344425711,0,0.288030006257865,0,0,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0.302478555410522,0.0974578807397524,0.288635524920988,0.116876902181569,0,0,0.179427713218951,0.167884616364078,0.19318959403219,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.486213434136588,0.209613162627982,0.183843508450014,0,0.412070114477788,0,0,0.25347929989024,0,0.187283014939765,0.192075457214608,0.17230640686684,0,0.115884325944855,0.38581844092741,0,0.294397840268795,0,0,0.238436189947321,0.290692833264657,0.282328141245992,0,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0,0.214871054048298,0,0.220591419119515,0.463735671240843 | ||
|short_description=p3@Rp2h | |short_description=p3@Rp2h | ||
}} | }} |
Latest revision as of 19:19, 1 October 2015
Short description: | p3@Rp2h |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rp2h_5end |
Coexpression cluster: | MCL_coexpression_mm9:533 |
Association with transcript: | 53bp_to_ENSMUST00000133619_5end |
EntrezGene: | Rp2h |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 4.38e-10 | 3 |
brush border epithelial cell | 1.93e-08 | 6 |
gut absorptive cell | 1.93e-08 | 6 |
enterocyte | 1.93e-08 | 6 |
columnar/cuboidal epithelial cell | 3.11e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.59e-19 | 15 |
organ component layer | 8.47e-19 | 24 |
intestinal mucosa | 2.80e-14 | 13 |
wall of intestine | 2.80e-14 | 13 |
gastrointestinal system mucosa | 2.80e-14 | 13 |
intestine | 6.99e-12 | 31 |
gastrointestinal system | 2.75e-11 | 47 |
ileal mucosa | 4.38e-10 | 3 |
ileum | 4.38e-10 | 3 |
mucosa of small intestine | 4.38e-10 | 3 |
wall of small intestine | 4.38e-10 | 3 |
lymphoid system | 1.82e-09 | 3 |
small intestine | 1.18e-07 | 4 |
gut-associated lymphoid tissue | 3.05e-07 | 2 |
mucosa-associated lymphoid tissue | 3.05e-07 | 2 |
lymphoid tissue | 3.05e-07 | 2 |
colon | 3.51e-07 | 2 |
large intestine | 3.51e-07 | 2 |