FFCP PHASE1:Mm9::chr4:128795953..128795960,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=223 | |MCL_coexpression_id=223 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:128795953..128795960,- | |||
|description=CAGE_peak_at_chr4:128795953..128795960,- | |description=CAGE_peak_at_chr4:128795953..128795960,- | ||
|id=chr4:128795953..128795960,- | |id=chr4:128795953..128795960,- | ||
|ontology_enrichment_celltype=CL:0002610!1.45e-11!3;CL:0000117!2.77e-08!23;CL:0000337!2.77e-08!23 | |ontology_enrichment_celltype=CL:0002610!1.45e-11!3;CL:0000117!2.77e-08!23;CL:0000337!2.77e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,8.72e-24,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!3.93e-19!49;UBERON:0000955!1.12e-18!50;UBERON:0006238!1.12e-18!50;UBERON:0000033!6.67e-16!63;UBERON:0001017!6.86e-15!73;UBERON:0005743!6.86e-15!73;UBERON:0002791!1.37e-14!29;UBERON:0003528!1.37e-14!29;UBERON:0001893!1.37e-14!29;UBERON:0000073!2.18e-14!75;UBERON:0001016!2.18e-14!75;UBERON:0002780!2.58e-14!39;UBERON:0001890!2.58e-14!39;UBERON:0006240!2.58e-14!39;UBERON:0002020!2.67e-14!34;UBERON:0003080!6.90e-14!40;UBERON:0001049!1.95e-13!52;UBERON:0005068!1.95e-13!52;UBERON:0006241!1.95e-13!52;UBERON:0007135!1.95e-13!52;UBERON:0003056!1.36e-12!49;UBERON:0000956!1.33e-11!21;UBERON:0001869!1.33e-11!21;UBERON:0000203!1.33e-11!21;UBERON:0004684!1.45e-11!3;UBERON:0002275!1.45e-11!3;UBERON:0004121!9.37e-11!102;UBERON:0000924!9.37e-11!102;UBERON:0006601!9.37e-11!102;UBERON:0007811!1.24e-10!86;UBERON:0002346!2.40e-10!71;UBERON:0003075!2.40e-10!71;UBERON:0007284!2.40e-10!71;UBERON:0000153!2.09e-09!94;UBERON:0002021!1.55e-08!10;UBERON:0000411!1.55e-08!10;UBERON:0001950!1.55e-08!10;UBERON:0002619!6.13e-07!17 | |ontology_enrichment_uberon=UBERON:0002616!3.93e-19!49;UBERON:0000955!1.12e-18!50;UBERON:0006238!1.12e-18!50;UBERON:0000033!6.67e-16!63;UBERON:0001017!6.86e-15!73;UBERON:0005743!6.86e-15!73;UBERON:0002791!1.37e-14!29;UBERON:0003528!1.37e-14!29;UBERON:0001893!1.37e-14!29;UBERON:0000073!2.18e-14!75;UBERON:0001016!2.18e-14!75;UBERON:0002780!2.58e-14!39;UBERON:0001890!2.58e-14!39;UBERON:0006240!2.58e-14!39;UBERON:0002020!2.67e-14!34;UBERON:0003080!6.90e-14!40;UBERON:0001049!1.95e-13!52;UBERON:0005068!1.95e-13!52;UBERON:0006241!1.95e-13!52;UBERON:0007135!1.95e-13!52;UBERON:0003056!1.36e-12!49;UBERON:0000956!1.33e-11!21;UBERON:0001869!1.33e-11!21;UBERON:0000203!1.33e-11!21;UBERON:0004684!1.45e-11!3;UBERON:0002275!1.45e-11!3;UBERON:0004121!9.37e-11!102;UBERON:0000924!9.37e-11!102;UBERON:0006601!9.37e-11!102;UBERON:0007811!1.24e-10!86;UBERON:0002346!2.40e-10!71;UBERON:0003075!2.40e-10!71;UBERON:0007284!2.40e-10!71;UBERON:0000153!2.09e-09!94;UBERON:0002021!1.55e-08!10;UBERON:0000411!1.55e-08!10;UBERON:0001950!1.55e-08!10;UBERON:0002619!6.13e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,8.72e-24,3;UBERON:0002275,8.72e-24,3;UBERON:0000073,1.10e-08,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0.285650984403804,0,0,0,0,1.10115880999389,1.27687338085188,0.768032666281217,0,0,0,0,0,0.763991238884051,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,3.20250421973039,0.125654352112864,0.347648640384553,0.511430914660661,0.20778804455956,0.973447578406546,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.565947171027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0.460325236507177,0.572895513439397,0,1.37016503954128,0.755393897389701,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0.285650984403804,0,0,0,0,1.10115880999389,1.27687338085188,0.768032666281217,0,0,0,0,0,0.763991238884051,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,3.20250421973039,0.125654352112864,0.347648640384553,0.511430914660661,0.20778804455956,0.973447578406546,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.565947171027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0.460325236507177,0.572895513439397,0,1.37016503954128,0.755393897389701,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:128795953..128795960,- | |short_description=p@chr4:128795953..128795960,- | ||
}} | }} |
Latest revision as of 19:10, 4 August 2015
Short description: | p@chr4:128795953..128795960, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:128795953..128795960, - |
Coexpression cluster: | MCL_coexpression_mm9:223 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 8.72e-24 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 8.72e-24 | 3 |
reticular formation | 8.72e-24 | 3 |
regional part of nervous system | 1.10e-08 | 54 |