FFCP PHASE1:Mm9::chr17:46297510..46297526,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56055 | |EntrezGene=56055 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |MCL_coexpression_id=0 | ||
|TSSclassifier=NA | |||
|UniProt=Q3UJK4,E9PVQ4 | |UniProt=Q3UJK4,E9PVQ4 | ||
|association_with_transcript=-454bp_to_ENSMUST00000024748,ENSMUST00000169383,NM_001145979,NM_019581,uc008crv.2,uc008crw.2,uc012aul.1_5end | |association_with_transcript=-454bp_to_ENSMUST00000024748,ENSMUST00000169383,NM_001145979,NM_019581,uc008crv.2,uc008crw.2,uc012aul.1_5end | ||
|cluster_id=chr17:46297510..46297526,+ | |||
|description=CAGE_peak_8_at_Gtpbp2_5end | |description=CAGE_peak_8_at_Gtpbp2_5end | ||
|id=chr17:46297510..46297526,+ | |id=chr17:46297510..46297526,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.07e-16!9;CL:0002251!2.07e-16!9;CL:0000239!2.85e-13!6;CL:0000677!2.85e-13!6;CL:0000212!2.85e-13!6;CL:0000584!2.85e-13!6;CL:0000066!5.08e-13!25;CL:0000075!2.52e-11!7;CL:0000473!6.18e-10!3;CL:0000627!6.18e-10!3;CL:0000682!6.18e-10!3;CL:0002076!1.96e-09!15;CL:0000223!8.42e-09!20 | |ontology_enrichment_celltype=CL:0002563!2.07e-16!9;CL:0002251!2.07e-16!9;CL:0000239!2.85e-13!6;CL:0000677!2.85e-13!6;CL:0000212!2.85e-13!6;CL:0000584!2.85e-13!6;CL:0000066!5.08e-13!25;CL:0000075!2.52e-11!7;CL:0000473!6.18e-10!3;CL:0000627!6.18e-10!3;CL:0000682!6.18e-10!3;CL:0002076!1.96e-09!15;CL:0000223!8.42e-09!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.68e-22,6;CL:0000677,3.68e-22,6;CL:0000584,3.68e-22,6;CL:0000075,4.01e-19,7;CL:0002563,4.60e-15,9;CL:0002251,4.60e-15,9;CL:0002076,2.41e-09,15;CL:0000223,3.53e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.77e-18!15;UBERON:0001242!9.25e-18!13;UBERON:0000060!9.25e-18!13;UBERON:0001262!9.25e-18!13;UBERON:0004786!9.25e-18!13;UBERON:0003350!2.07e-16!9;UBERON:0004808!2.07e-16!9;UBERON:0001277!2.07e-16!9;UBERON:0000485!3.07e-13!11;UBERON:0004923!7.80e-11!24;UBERON:0000160!1.12e-07!43 | |ontology_enrichment_uberon=UBERON:0000344!1.77e-18!15;UBERON:0001242!9.25e-18!13;UBERON:0000060!9.25e-18!13;UBERON:0001262!9.25e-18!13;UBERON:0004786!9.25e-18!13;UBERON:0003350!2.07e-16!9;UBERON:0004808!2.07e-16!9;UBERON:0001277!2.07e-16!9;UBERON:0000485!3.07e-13!11;UBERON:0004923!7.80e-11!24;UBERON:0000160!1.12e-07!43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.60e-15,9;UBERON:0004808,4.60e-15,9;UBERON:0001277,4.60e-15,9;UBERON:0000485,1.80e-12,11;UBERON:0001242,1.14e-10,13;UBERON:0001262,1.14e-10,13;UBERON:0004786,1.14e-10,13;UBERON:0000344,2.41e-09,15 | |||
|phase1_expression=0,2.44282785347553,0,1.20985684522732,3.00537437967808,0.503637815735669,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3577272795174,0,0,0.159992422793407,0,0.57423196411502,0.430761996159075,0.861884930743556,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,34.3852692597356,0,0,0,0,0,0,0,0,0.241584120826006,24.4825505319186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.44282785347553,0,1.20985684522732,3.00537437967808,0.503637815735669,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3577272795174,0,0,0.159992422793407,0,0.57423196411502,0.430761996159075,0.861884930743556,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,34.3852692597356,0,0,0,0,0,0,0,0,0.241584120826006,24.4825505319186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@Gtpbp2 | |short_description=p8@Gtpbp2 | ||
}} | }} |
Latest revision as of 13:23, 26 September 2015
Short description: | p8@Gtpbp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Gtpbp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -454bp_to_ENSMUST00000024748, ENSMUST00000169383, NM_001145979, NM_019581, uc008crv.2, uc008crw.2, uc012aul.1_5end |
EntrezGene: | Gtpbp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.68e-22 | 6 |
gut absorptive cell | 3.68e-22 | 6 |
enterocyte | 3.68e-22 | 6 |
columnar/cuboidal epithelial cell | 4.01e-19 | 7 |
intestinal epithelial cell | 4.60e-15 | 9 |
epithelial cell of alimentary canal | 4.60e-15 | 9 |
endo-epithelial cell | 2.41e-09 | 15 |
endodermal cell | 3.53e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 4.60e-15 | 9 |
gastrointestinal system epithelium | 4.60e-15 | 9 |
intestinal epithelium | 4.60e-15 | 9 |
simple columnar epithelium | 1.80e-12 | 11 |
intestinal mucosa | 1.14e-10 | 13 |
wall of intestine | 1.14e-10 | 13 |
gastrointestinal system mucosa | 1.14e-10 | 13 |
mucosa | 2.41e-09 | 15 |