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FFCP PHASE1:Mm9::chr8:40728023..40728027,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20288
|EntrezGene=20288
|HGNC=
|HGNC=
|MCL_coexpression_id=67
|MCL_coexpression_id=67
|TSSclassifier=NA
|UniProt=P30204,Q8CED7
|UniProt=P30204,Q8CED7
|association_with_transcript=4bp_to_ENSMUST00000026021,ENSMUST00000170091,NM_001113326,NM_031195,uc009lmk.1,uc012gcm.1_5end
|association_with_transcript=4bp_to_ENSMUST00000026021,ENSMUST00000170091,NM_001113326,NM_031195,uc009lmk.1,uc012gcm.1_5end
|cluster_id=chr8:40728023..40728027,-
|description=CAGE_peak_1_at_Msr1_5end
|description=CAGE_peak_1_at_Msr1_5end
|id=chr8:40728023..40728027,-
|id=chr8:40728023..40728027,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!6.16e-11!193;UBERON:0004120!6.16e-11!193;UBERON:0006603!6.16e-11!193;UBERON:0005256!3.94e-09!47;UBERON:0002100!6.54e-09!98;UBERON:0009569!1.70e-08!66;UBERON:0005177!1.83e-08!85;UBERON:0002107!2.60e-08!22;UBERON:0007499!2.60e-08!22;UBERON:0006925!2.60e-08!22;UBERON:0009497!2.60e-08!22;UBERON:0000015!2.60e-08!22;UBERON:0002423!2.60e-08!22;UBERON:0006235!2.60e-08!22;UBERON:0008835!2.60e-08!22;UBERON:0003894!2.60e-08!22;UBERON:0004161!2.60e-08!22;UBERON:0008836!2.60e-08!22;UBERON:0005172!3.62e-08!49;UBERON:0005173!3.62e-08!49;UBERON:0002417!3.62e-08!49;UBERON:0000916!3.62e-08!49;UBERON:0003914!5.04e-08!47;UBERON:0002365!6.82e-08!25;UBERON:0002330!6.82e-08!25;UBERON:0003104!7.01e-08!131;UBERON:0009142!7.01e-08!131;UBERON:0009854!1.89e-07!23;UBERON:0009856!1.89e-07!23
|ontology_enrichment_uberon=UBERON:0000926!6.16e-11!193;UBERON:0004120!6.16e-11!193;UBERON:0006603!6.16e-11!193;UBERON:0005256!3.94e-09!47;UBERON:0002100!6.54e-09!98;UBERON:0009569!1.70e-08!66;UBERON:0005177!1.83e-08!85;UBERON:0002107!2.60e-08!22;UBERON:0007499!2.60e-08!22;UBERON:0006925!2.60e-08!22;UBERON:0009497!2.60e-08!22;UBERON:0000015!2.60e-08!22;UBERON:0002423!2.60e-08!22;UBERON:0006235!2.60e-08!22;UBERON:0008835!2.60e-08!22;UBERON:0003894!2.60e-08!22;UBERON:0004161!2.60e-08!22;UBERON:0008836!2.60e-08!22;UBERON:0005172!3.62e-08!49;UBERON:0005173!3.62e-08!49;UBERON:0002417!3.62e-08!49;UBERON:0000916!3.62e-08!49;UBERON:0003914!5.04e-08!47;UBERON:0002365!6.82e-08!25;UBERON:0002330!6.82e-08!25;UBERON:0003104!7.01e-08!131;UBERON:0009142!7.01e-08!131;UBERON:0009854!1.89e-07!23;UBERON:0009856!1.89e-07!23
|ontology_enrichment_uberon_v019_2=UBERON:0005256,2.63e-13,45;UBERON:0002107,1.59e-11,22;UBERON:0007499,1.59e-11,22;UBERON:0006925,1.59e-11,22;UBERON:0009497,1.59e-11,22;UBERON:0000015,1.59e-11,22;UBERON:0002423,1.59e-11,22;UBERON:0006235,1.59e-11,22;UBERON:0008835,1.59e-11,22;UBERON:0003894,1.59e-11,22;UBERON:0004161,1.59e-11,22;UBERON:0008836,1.59e-11,22;UBERON:0002100,6.30e-11,90;UBERON:0009854,9.80e-11,23;UBERON:0009856,9.80e-11,23;UBERON:0002365,1.65e-10,25;UBERON:0002330,1.65e-10,25;UBERON:0003104,1.19e-09,61;UBERON:0009142,1.19e-09,61;UBERON:0005177,5.37e-09,79;UBERON:0003914,2.23e-08,47;UBERON:0005172,7.39e-08,49;UBERON:0005173,7.39e-08,49;UBERON:0002417,7.39e-08,49;UBERON:0000916,7.39e-08,49;UBERON:0009569,5.17e-07,66
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,1.01237633694913,0.699561878128147,0.157731082679119,0.822686601634433,0,0.850432901510698,0.0992909512008853,0,0.639969691173627,0.22940928106717,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,3.76678467663217,14.0640362014284,10.470474879476,0,0,1.94204141212461,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,2.82985379639542,12.8940047972441,2.06268836910977,0,0,0,0,0,56.6936821887281,25.7105254267413,39.0764063220355,6.2916023208865,3.84218305321555,0.207379224616955,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0.0914876436024097,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.142371680799103,0,0.908714319998209,0.529000920747499,8.69593466105033,29.2544118173671,0,0,3.24888208723835,0.448026887097336,1.68533304158102,0,0,0,0,0,0,0,0,0,0,3.4255163915718,27.188477782953,2.82040064223167,0.693941307064543,0.913396434936424,1.38369298353635,1.95939432718409,2.82212897125692,0.879666139307728,0.494389935468748,3.90418263683761,1.76922110389975,1.45590164952668,1.32504911076236,0.969750506270444,0,0,0,2.29911349687732,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0,0,1.93494791315601,1.61729061793121,0.252722758433675,1.47309299120532,0.650602214813519,0.459804208866946,0.540186389416048,0.753524089178575,1.02054748726992,0.512454881139399,0.468508622798644,0,0,0.189106080167819,0.527853372491847,0.43839146485515,0.278047249225598,1.39300866608867,0.823128545631774,0,0,0,0,0,0.234526059981096,0.180062061461015,0.710234206755631,0.393528463494808,0.925602677324269,0.232533944750408,0.536546802799238,0.934122738937356,0.658239399653922,0.985004784474571,0.810688095458557,1.75439984910399,3.29325172936576,2.01309628140558,0,0.102904612379284,0,1.32225283331772,0.213288250535234,0.464473343720877,0.902072229254653,1.4117846723634,1.11189021922435,1.14135375667535,1.42358718463353,0.988193728344065,1.25667604400135,1.39269530428806,1.75467678407208,2.69645822596266,2.16138049874694,1.59313018603494,0,0.685491075658373,1.1270773567308,0.203651327845314,0.193952487167626,0.98190147846446,0.379419222745544,0.442830443938806,0.156998727841375,0,4.74324203339438,1.66845105716094,0.589676985339609,1.79889689907883,1.01430060694251,2.17059443777175,2.5462585178142,3.45235364940973,13.619359049103,8.23684239564244,21.5652309791032,13.7692150637346,6.86482880852033,8.33510297225469,9.32866550313943,10.1313139486307,2.03228509183265,0.37898282354097,0.325929952884052,0.509235257325564,0.704070744865506,0.837531287209079,1.6663054862021,2.92700471786698,0.630540576424764,1.32878813789265,0.797273843287435,0.983179888294428,1.89953480052485,1.44649058581512,36.1899081454253,88.112720778631,0.983528546038072,1.65562047782839,0.160550589987792,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0.712262414669021,0.977321756121456,1.15479086080775,0,0.485561272309963,0,0.565815239267694,0,2.45948118355142,3.35956781118687,3.99887102425256,3.92147116223193,1.58018378967908,1.05418608574999,2.06271086496374,0,0.18006109403131,0,0.214337035031592,0.532020700926821,0.713475270408282,0.493647061806363,0.608929898229199,0.23467170806371,0.42366414172764,0.441056796109924,1.31909002353184,3.22928853391811,1.26657142349127,1.19372344003136,0.656563598980245,1.1659233465194,0.18542530201051,0.854354403989263,1.857481811669,4.25947412950337,1.50694765603753,0.410082683163076,0.915112692826091,0,0.139951452323658,0,0,0.158167996790568,0.813277868507395,0.540026704109006,0.836353184057875,1.52853794622324,1.34864346384821,3.2234847732881,0.785267825952089,1.55537967950151,0,0,0,0.165458490457098,0,0.129159823477731,0.506868376472335,0.469428954583016,0.5208175393758,0.209718688851422,0.241584120826006,0.864090018773596,0.316011120628178,0.405450430580328,0.410843828659309,0.51968329191118,1.43221356533985,0.993406773906324,0.120195449519969,0.443068581523732,0.504832249740738,0.533447646584999,0.201652370273681,0.194915761479505,0.769694733122636,0.584384510907845,0.453460767230423,0,0,0,1.35232715822533,2.25218970541418,0.915758121336325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0.972426868273176,0.419226325255965,0.551530525350042,1.11123363900808,1.03017528619447,0.64183841918363,0,0.25347929989024,0.377252682772152,2.1537546718073,1.40855335290712,1.55075766180156,1.42888107384922,0.927074607558844,0.578727661391115,0.824171801606613,1.47198920134397,0.685738504770831,1.06485483695602,0.953744759789284,1.0174249164263,1.2234219453993,1.35383372626682,0.548783918618318,1.8414879800649,1.62964936615034,0,0.711810108745045,1.0835493061312,0.818462086339379,1.39443157067369,1.15743966588685,0.249810577937946,1.87145286756327,2.79332370262788,1.3390183244819,1.54413993383661,0.927471342481686
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,1.01237633694913,0.699561878128147,0.157731082679119,0.822686601634433,0,0.850432901510698,0.0992909512008853,0,0.639969691173627,0.22940928106717,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,3.76678467663217,14.0640362014284,10.470474879476,0,0,1.94204141212461,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,2.82985379639542,12.8940047972441,2.06268836910977,0,0,0,0,0,56.6936821887281,25.7105254267413,39.0764063220355,6.2916023208865,3.84218305321555,0.207379224616955,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0.0914876436024097,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.142371680799103,0,0.908714319998209,0.529000920747499,8.69593466105033,29.2544118173671,0,0,3.24888208723835,0.448026887097336,1.68533304158102,0,0,0,0,0,0,0,0,0,0,3.4255163915718,27.188477782953,2.82040064223167,0.693941307064543,0.913396434936424,1.38369298353635,1.95939432718409,2.82212897125692,0.879666139307728,0.494389935468748,3.90418263683761,1.76922110389975,1.45590164952668,1.32504911076236,0.969750506270444,0,0,0,2.29911349687732,0,0,0,0,0,0,0.173824320192276,0.255715457330331,0,0,1.93494791315601,1.61729061793121,0.252722758433675,1.47309299120532,0.650602214813519,0.459804208866946,0.540186389416048,0.753524089178575,1.02054748726992,0.512454881139399,0.468508622798644,0,0,0.189106080167819,0.527853372491847,0.43839146485515,0.278047249225598,1.39300866608867,0.823128545631774,0,0,0,0,0,0.234526059981096,0.180062061461015,0.710234206755631,0.393528463494808,0.925602677324269,0.232533944750408,0.536546802799238,0.934122738937356,0.658239399653922,0.985004784474571,0.810688095458557,1.75439984910399,3.29325172936576,2.01309628140558,0,0.102904612379284,0,1.32225283331772,0.213288250535234,0.464473343720877,0.902072229254653,1.4117846723634,1.11189021922435,1.14135375667535,1.42358718463353,0.988193728344065,1.25667604400135,1.39269530428806,1.75467678407208,2.69645822596266,2.16138049874694,1.59313018603494,0,0.685491075658373,1.1270773567308,0.203651327845314,0.193952487167626,0.98190147846446,0.379419222745544,0.442830443938806,0.156998727841375,0,4.74324203339438,1.66845105716094,0.589676985339609,1.79889689907883,1.01430060694251,2.17059443777175,2.5462585178142,3.45235364940973,13.619359049103,8.23684239564244,21.5652309791032,13.7692150637346,6.86482880852033,8.33510297225469,9.32866550313943,10.1313139486307,2.03228509183265,0.37898282354097,0.325929952884052,0.509235257325564,0.704070744865506,0.837531287209079,1.6663054862021,2.92700471786698,0.630540576424764,1.32878813789265,0.797273843287435,0.983179888294428,1.89953480052485,1.44649058581512,36.1899081454253,88.112720778631,0.983528546038072,1.65562047782839,0.160550589987792,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0.712262414669021,0.977321756121456,1.15479086080775,0,0.485561272309963,0,0.565815239267694,0,2.45948118355142,3.35956781118687,3.99887102425256,3.92147116223193,1.58018378967908,1.05418608574999,2.06271086496374,0,0.18006109403131,0,0.214337035031592,0.532020700926821,0.713475270408282,0.493647061806363,0.608929898229199,0.23467170806371,0.42366414172764,0.441056796109924,1.31909002353184,3.22928853391811,1.26657142349127,1.19372344003136,0.656563598980245,1.1659233465194,0.18542530201051,0.854354403989263,1.857481811669,4.25947412950337,1.50694765603753,0.410082683163076,0.915112692826091,0,0.139951452323658,0,0,0.158167996790568,0.813277868507395,0.540026704109006,0.836353184057875,1.52853794622324,1.34864346384821,3.2234847732881,0.785267825952089,1.55537967950151,0,0,0,0.165458490457098,0,0.129159823477731,0.506868376472335,0.469428954583016,0.5208175393758,0.209718688851422,0.241584120826006,0.864090018773596,0.316011120628178,0.405450430580328,0.410843828659309,0.51968329191118,1.43221356533985,0.993406773906324,0.120195449519969,0.443068581523732,0.504832249740738,0.533447646584999,0.201652370273681,0.194915761479505,0.769694733122636,0.584384510907845,0.453460767230423,0,0,0,1.35232715822533,2.25218970541418,0.915758121336325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.341467211508268,0.972426868273176,0.419226325255965,0.551530525350042,1.11123363900808,1.03017528619447,0.64183841918363,0,0.25347929989024,0.377252682772152,2.1537546718073,1.40855335290712,1.55075766180156,1.42888107384922,0.927074607558844,0.578727661391115,0.824171801606613,1.47198920134397,0.685738504770831,1.06485483695602,0.953744759789284,1.0174249164263,1.2234219453993,1.35383372626682,0.548783918618318,1.8414879800649,1.62964936615034,0,0.711810108745045,1.0835493061312,0.818462086339379,1.39443157067369,1.15743966588685,0.249810577937946,1.87145286756327,2.79332370262788,1.3390183244819,1.54413993383661,0.927471342481686
|short_description=p1@Msr1
|short_description=p1@Msr1
}}
}}

Latest revision as of 23:38, 1 October 2015

Short description:p1@Msr1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Msr1_5end
Coexpression cluster:MCL_coexpression_mm9:67
Association with transcript: 4bp_to_ENSMUST00000026021, ENSMUST00000170091, NM_001113326, NM_031195, uc009lmk.1, uc012gcm.1_5end
EntrezGene:Msr1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Msr1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H114.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H310.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.89
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C756.69
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E725.71
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D239.08
Mouse Microglia, donor1.CNhs12629.11718-123C86.29
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.70
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F729.25
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.43
accessory axillary lymph node, adult.CNhs10475.1063-29H927.19
adrenal gland, adult.CNhs10508.49-24D72.82
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C12.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H13.90
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D33.29
heart, neonate N30.CNhs11202.1390-42D22.01
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B24.74
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F413.62
liver, neonate N03.CNhs11123.1345-25G28.24
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H213.77
liver, neonate N10.CNhs11115.751-24B96.86
liver, neonate N20.CNhs11220.823-25A38.34
liver, neonate N25.CNhs11198.1368-26H19.33
liver, neonate N30.CNhs11106.1382-42D110.13
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A136.19
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A188.11
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G43.23
skin, neonate N03.CNhs11215.662-22H31.27
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F24.26
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A93.22
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.56
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk mesenchyme2.63e-1345
liver1.59e-1122
epithelial sac1.59e-1122
digestive gland1.59e-1122
epithelium of foregut-midgut junction1.59e-1122
anatomical boundary1.59e-1122
hepatobiliary system1.59e-1122
foregut-midgut junction1.59e-1122
hepatic diverticulum1.59e-1122
liver primordium1.59e-1122
septum transversum1.59e-1122
liver bud1.59e-1122
trunk6.30e-1190
digestive tract diverticulum9.80e-1123
sac9.80e-1123
exocrine gland1.65e-1025
exocrine system1.65e-1025
mesenchyme1.19e-0961
entire embryonic mesenchyme1.19e-0961
trunk region element5.37e-0979
epithelial tube2.23e-0847
abdomen element7.39e-0849
abdominal segment element7.39e-0849
abdominal segment of trunk7.39e-0849
abdomen7.39e-0849
subdivision of trunk5.17e-0766
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