FFCP PHASE1:Hg19::chr2:216237349..216237362,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:216237349..216237362,-
|short_description=p67@FN1
|description=CAGE_peak_67_at_FN1_5end
|association_with_transcript=-144bp_to_ENST00000461974_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-144bp_to_ENST00000461974_5end | |||
|cluster_id=chr2:216237349..216237362,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_67_at_FN1_5end | |||
|id=chr2:216237349..216237362,- | |||
|ontology_enrichment_celltype=CL:0000057!7.84e-21!75;CL:0000055!1.41e-16!180;CL:0002620!4.97e-12!23;CL:0002334!5.56e-11!12;CL:0002371!1.18e-10!591;CL:0000144!2.55e-10!625;CL:0000048!3.75e-10!430;CL:0000723!7.67e-10!436;CL:0000034!2.39e-09!444;CL:0000548!9.46e-09!679;CL:0000004!9.46e-09!679;CL:0000255!9.46e-09!679;CL:0000012!1.75e-08!682;CL:0002320!4.63e-07!365;CL:0000134!4.83e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000680;1.71e-11;7!CL:0002541;4.55e-11;3!CL:0000034;1.56e-10;69!CL:0000594;2.86e-10;3!CL:0000723;3.12e-10;61!CL:0002570;9.35e-10;8!CL:0000134;2.13e-09;55!CL:0000048;4.90e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.19e-11,3;CL:0000594,2.48e-10,3;CL:0002570,1.13e-09,8;CL:0000057,1.27e-07,76;CL:0000048,9.12e-07,427 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.06e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002097!1.30e-08!40;UBERON:0002199!1.73e-08!45;UBERON:0002416!1.73e-08!45;UBERON:0003102!2.45e-08!95;UBERON:0002384!2.12e-07!375;UBERON:0003688!5.16e-07!6;UBERON:0002358!5.16e-07!6;UBERON:0003684!5.16e-07!6;UBERON:0001178!5.16e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;4.55e-11;3!UBERON:0000920;4.55e-11;3!UBERON:0001013;2.36e-10;14!UBERON:0003688;3.44e-09;6!UBERON:0002358;3.44e-09;6!UBERON:0003684;3.44e-09;6!UBERON:0001178;3.44e-09;6!UBERON:0005406;1.23e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.19e-11,3;UBERON:0001013,2.50e-10,14;UBERON:0003688,4.19e-09,6;UBERON:0002358,4.19e-09,6;UBERON:0003684,4.19e-09,6;UBERON:0001178,4.19e-09,6;UBERON:0005406,1.01e-07,2;UBERON:0002384,6.57e-07,371 | |||
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| ||
|short_description=p67@FN1 | |||
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Latest revision as of 02:02, 20 September 2015
Short description: | p67@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_67_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | -144bp_to_ENST00000461974_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.19e-11 | 3 |
skeletal muscle satellite cell | 2.48e-10 | 3 |
mesenchymal stem cell of adipose | 1.13e-09 | 8 |
fibroblast | 1.27e-07 | 76 |
multi fate stem cell | 9.12e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.19e-11 | 3 |
adipose tissue | 2.50e-10 | 14 |
omentum | 4.19e-09 | 6 |
peritoneum | 4.19e-09 | 6 |
abdominal cavity | 4.19e-09 | 6 |
visceral peritoneum | 4.19e-09 | 6 |
perirenal fat | 1.01e-07 | 2 |
connective tissue | 6.57e-07 | 371 |