FFCP PHASE1:Mm9::chr4:116230661..116230695,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=77110 | |EntrezGene=77110 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |MCL_coexpression_id=24 | ||
|TSSclassifier=NA | |||
|UniProt=Q6NZP2 | |UniProt=Q6NZP2 | ||
|association_with_transcript=0bp_to_ENSMUST00000106475_5end | |association_with_transcript=0bp_to_ENSMUST00000106475_5end | ||
|cluster_id=chr4:116230661..116230695,+ | |||
|description=CAGE_peak_3_at_Gpbp1l1_5end | |description=CAGE_peak_3_at_Gpbp1l1_5end | ||
|id=chr4:116230661..116230695,+ | |id=chr4:116230661..116230695,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.76e-09,9;CL:0002251,1.76e-09,9;CL:0000239,2.75e-09,6;CL:0000677,2.75e-09,6;CL:0000584,2.75e-09,6;CL:0000075,8.74e-08,7;CL:0000066,1.01e-07,25;CL:0002076,2.63e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.82e-10!15;UBERON:0001242!1.05e-08!13;UBERON:0000060!1.05e-08!13;UBERON:0001262!1.05e-08!13;UBERON:0004786!1.05e-08!13;UBERON:0004923!1.45e-08!24;UBERON:0004119!1.07e-07!130;UBERON:0000925!1.07e-07!130;UBERON:0006595!1.07e-07!130;UBERON:0000160!2.92e-07!43;UBERON:0001007!4.90e-07!128;UBERON:0001555!4.90e-07!128;UBERON:0007026!4.90e-07!128 | |ontology_enrichment_uberon=UBERON:0000344!5.82e-10!15;UBERON:0001242!1.05e-08!13;UBERON:0000060!1.05e-08!13;UBERON:0001262!1.05e-08!13;UBERON:0004786!1.05e-08!13;UBERON:0004923!1.45e-08!24;UBERON:0004119!1.07e-07!130;UBERON:0000925!1.07e-07!130;UBERON:0006595!1.07e-07!130;UBERON:0000160!2.92e-07!43;UBERON:0001007!4.90e-07!128;UBERON:0001555!4.90e-07!128;UBERON:0007026!4.90e-07!128 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.18e-22,31;UBERON:0005409,2.08e-17,47;UBERON:0000344,5.05e-17,15;UBERON:0001242,1.77e-14,13;UBERON:0001262,1.77e-14,13;UBERON:0004786,1.77e-14,13;UBERON:0004923,8.80e-14,24;UBERON:0004119,6.99e-10,118;UBERON:0000925,6.99e-10,118;UBERON:0006595,6.99e-10,118;UBERON:0003350,1.76e-09,9;UBERON:0004808,1.76e-09,9;UBERON:0001277,1.76e-09,9;UBERON:0001007,9.27e-09,116;UBERON:0001555,9.27e-09,116;UBERON:0007026,9.27e-09,116;UBERON:0004921,1.43e-07,114;UBERON:0000485,2.05e-07,11 | |||
|phase1_expression=0,7.32848356042658,12.2849794635175,11.1911758183527,10.5188103288733,2.35030980676646,3.50418960893289,0.645616617207881,0.422366166455,0.70219357896598,0.171217968225505,0,1.54080656938085,0.611942816932982,0,0.607425802169478,0,0.630924330716475,0.274228867211478,0.42438965179803,3.48677489619386,0.695036658406197,1.56719873483361,5.75972722056264,4.35877634027623,5.16808767703518,6.46142994238612,4.95583835177545,5.51067916423484,3.02436155711917,3.76941868114018,0.635030673459631,0,0,2.88851619751275,0.664938581433969,1.02084678131185,2.92972141515835,0,3.66466620781659,1.17646297606203,0,0.485510353031154,0.251793635951155,0.405507724878058,0.367093504323363,0,0,0.659058548203415,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,1.26766280701236,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0.30559649555362,0,0,0,0.151452386666368,0.0755715601067855,0.579728977403356,0,0.679971333707751,0,1.29955283489534,0.448026887097336,1.82577746171277,0,0,0,0.563373679106722,1.28326477414318,0,0,0.216491041011214,0.506719730950197,1.01104889002957,1.59857431606684,0.258937883647172,0.445326417194474,0,0,0,0.301445281105245,1.29347577849275,0.502666365318702,2.71914464507811,1.01219549843938,0,0,0,0,9.31958806090611,0,0,3.57639877292028,0.479260498023681,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0.497627882440372,0.505445516867349,1.26265113531884,0.390361328888111,0,0,0.452114453507145,0.272145996605311,0.2562274405697,0.0937017245597288,0.517406741478031,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0.199034266818493,0,1.02939162845886,1.13665399758237,0,0.234526059981096,0,0.473489471170421,0.590292695242212,0.308534225774757,0.697601834251224,0,0.467061369468678,0.16455984991348,0.32833492815819,0.324275238183423,0.292399974850665,0.439100230582101,0.268412837520744,0,0,15.8601015832223,5.81791246659797,0,0.232236671860439,0.77320476793256,1.00841762311671,0.22237804384487,1.14135375667535,5.21981967698963,0.658795818896044,2.01068167040216,1.39269530428806,1.16978452271472,1.79763881730844,2.80979464837102,5.57595565112228,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0.350679099451593,0.822074982615345,0.738050739898011,0.941992367048249,0.493588655687202,0.296452627087149,0.166845105716094,0,0.224862112384854,0,0.482354319504834,0,0.863088412352432,0.810676133875177,0.274561413188081,2.87536413054709,0.372140947668503,0.312037673114561,0,0.179397413521912,1.4473305640901,1.29327233116623,0,0,0.169745085775188,0.234690248288502,0,0.238043640886014,2.14647012643579,0.315270288212382,0.8858587585951,0.318909537314974,1.3109065177259,0.172684981865896,0.867894351489069,0,0,0,0.551873492609465,0,0.117211686592203,0,0.252470927204373,0.315508219416257,0,0.430846795465598,0.238968797952552,0,0.283076530788832,0,0,0,0,0.141940085208269,0,0.488660878060728,0.494910368917606,0,0.242780636154981,0,0,0,0,0.258428293168221,0.363533729477506,0,0,1.05418608574999,0,0.340439605753788,0.36012218806262,0.129358683782755,0.214337035031592,0.532020700926821,0.356737635204141,0,0.304464949114599,1.40803024838226,3.1774810629573,0.882113592219848,0.32977250588296,1.29171541356724,0.603129249281559,0.835606408021955,1.14898629821543,2.04036585640896,0,0.341741761595705,0.206386867963223,0.555583582109135,0,0.136694227721025,0.228778173206523,1.01987057996313,0.559805809294632,0.276399947608848,3.81868247206045,0.158167996790568,0,0.324016022465404,0,1.09181281873089,0.269728692769641,0.578574190077352,1.04702376793612,13.3503422490547,0,14.6560164057889,0.448549638131936,0.165458490457098,0,0.129159823477731,0.168956125490778,0.352071715937262,0.2604087696879,0.734015410979976,6.76435538312817,13.2493802878618,0.316011120628178,0.405450430580328,0.308132871494482,0,0,0.79472541912506,0.240390899039938,0.295379054349154,0.403865799792591,0.304827226619999,0,0.38983152295901,0.288635524920988,0.350630706544707,0.680191150845634,1.10992976687032,0.717710852875806,1.67884616364078,0.579568782096571,0.93841237725591,2.01466786693992,1.2862102744744,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0.682934423016537,0.243106717068294,0.209613162627982,0,0,0.412070114477788,0.320919209591815,0.252697211763798,1.2673964994512,0,0.187283014939765,0.384150914429216,0.229741875822453,0.476293691283074,0.115884325944855,0.192909220463705,1.64834360321323,0.294397840268795,0.342869252385415,0.354951612318675,0,0.581385666529314,0.376437521661322,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.689531376628944,0.409231043169689,0,0,0.249810577937946,0.701794825336225,0.644613162144895,0.57386499620653,0.661774257358546,0.463735671240843 | |phase1_expression=0,7.32848356042658,12.2849794635175,11.1911758183527,10.5188103288733,2.35030980676646,3.50418960893289,0.645616617207881,0.422366166455,0.70219357896598,0.171217968225505,0,1.54080656938085,0.611942816932982,0,0.607425802169478,0,0.630924330716475,0.274228867211478,0.42438965179803,3.48677489619386,0.695036658406197,1.56719873483361,5.75972722056264,4.35877634027623,5.16808767703518,6.46142994238612,4.95583835177545,5.51067916423484,3.02436155711917,3.76941868114018,0.635030673459631,0,0,2.88851619751275,0.664938581433969,1.02084678131185,2.92972141515835,0,3.66466620781659,1.17646297606203,0,0.485510353031154,0.251793635951155,0.405507724878058,0.367093504323363,0,0,0.659058548203415,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,1.26766280701236,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0.30559649555362,0,0,0,0.151452386666368,0.0755715601067855,0.579728977403356,0,0.679971333707751,0,1.29955283489534,0.448026887097336,1.82577746171277,0,0,0,0.563373679106722,1.28326477414318,0,0,0.216491041011214,0.506719730950197,1.01104889002957,1.59857431606684,0.258937883647172,0.445326417194474,0,0,0,0.301445281105245,1.29347577849275,0.502666365318702,2.71914464507811,1.01219549843938,0,0,0,0,9.31958806090611,0,0,3.57639877292028,0.479260498023681,1.19980546198682,0.381210681219194,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0.497627882440372,0.505445516867349,1.26265113531884,0.390361328888111,0,0,0.452114453507145,0.272145996605311,0.2562274405697,0.0937017245597288,0.517406741478031,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0.199034266818493,0,1.02939162845886,1.13665399758237,0,0.234526059981096,0,0.473489471170421,0.590292695242212,0.308534225774757,0.697601834251224,0,0.467061369468678,0.16455984991348,0.32833492815819,0.324275238183423,0.292399974850665,0.439100230582101,0.268412837520744,0,0,15.8601015832223,5.81791246659797,0,0.232236671860439,0.77320476793256,1.00841762311671,0.22237804384487,1.14135375667535,5.21981967698963,0.658795818896044,2.01068167040216,1.39269530428806,1.16978452271472,1.79763881730844,2.80979464837102,5.57595565112228,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0.350679099451593,0.822074982615345,0.738050739898011,0.941992367048249,0.493588655687202,0.296452627087149,0.166845105716094,0,0.224862112384854,0,0.482354319504834,0,0.863088412352432,0.810676133875177,0.274561413188081,2.87536413054709,0.372140947668503,0.312037673114561,0,0.179397413521912,1.4473305640901,1.29327233116623,0,0,0.169745085775188,0.234690248288502,0,0.238043640886014,2.14647012643579,0.315270288212382,0.8858587585951,0.318909537314974,1.3109065177259,0.172684981865896,0.867894351489069,0,0,0,0.551873492609465,0,0.117211686592203,0,0.252470927204373,0.315508219416257,0,0.430846795465598,0.238968797952552,0,0.283076530788832,0,0,0,0,0.141940085208269,0,0.488660878060728,0.494910368917606,0,0.242780636154981,0,0,0,0,0.258428293168221,0.363533729477506,0,0,1.05418608574999,0,0.340439605753788,0.36012218806262,0.129358683782755,0.214337035031592,0.532020700926821,0.356737635204141,0,0.304464949114599,1.40803024838226,3.1774810629573,0.882113592219848,0.32977250588296,1.29171541356724,0.603129249281559,0.835606408021955,1.14898629821543,2.04036585640896,0,0.341741761595705,0.206386867963223,0.555583582109135,0,0.136694227721025,0.228778173206523,1.01987057996313,0.559805809294632,0.276399947608848,3.81868247206045,0.158167996790568,0,0.324016022465404,0,1.09181281873089,0.269728692769641,0.578574190077352,1.04702376793612,13.3503422490547,0,14.6560164057889,0.448549638131936,0.165458490457098,0,0.129159823477731,0.168956125490778,0.352071715937262,0.2604087696879,0.734015410979976,6.76435538312817,13.2493802878618,0.316011120628178,0.405450430580328,0.308132871494482,0,0,0.79472541912506,0.240390899039938,0.295379054349154,0.403865799792591,0.304827226619999,0,0.38983152295901,0.288635524920988,0.350630706544707,0.680191150845634,1.10992976687032,0.717710852875806,1.67884616364078,0.579568782096571,0.93841237725591,2.01466786693992,1.2862102744744,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0.682934423016537,0.243106717068294,0.209613162627982,0,0,0.412070114477788,0.320919209591815,0.252697211763798,1.2673964994512,0,0.187283014939765,0.384150914429216,0.229741875822453,0.476293691283074,0.115884325944855,0.192909220463705,1.64834360321323,0.294397840268795,0.342869252385415,0.354951612318675,0,0.581385666529314,0.376437521661322,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.689531376628944,0.409231043169689,0,0,0.249810577937946,0.701794825336225,0.644613162144895,0.57386499620653,0.661774257358546,0.463735671240843 | ||
|short_description=p3@Gpbp1l1 | |short_description=p3@Gpbp1l1 | ||
}} | }} |
Latest revision as of 05:03, 26 September 2015
Short description: | p3@Gpbp1l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gpbp1l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000106475_5end |
EntrezGene: | Gpbp1l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.76e-09 | 9 |
epithelial cell of alimentary canal | 1.76e-09 | 9 |
brush border epithelial cell | 2.75e-09 | 6 |
gut absorptive cell | 2.75e-09 | 6 |
enterocyte | 2.75e-09 | 6 |
columnar/cuboidal epithelial cell | 8.74e-08 | 7 |
epithelial cell | 1.01e-07 | 25 |
endo-epithelial cell | 2.63e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.18e-22 | 31 |
gastrointestinal system | 2.08e-17 | 47 |
mucosa | 5.05e-17 | 15 |
intestinal mucosa | 1.77e-14 | 13 |
wall of intestine | 1.77e-14 | 13 |
gastrointestinal system mucosa | 1.77e-14 | 13 |
organ component layer | 8.80e-14 | 24 |
endoderm-derived structure | 6.99e-10 | 118 |
endoderm | 6.99e-10 | 118 |
presumptive endoderm | 6.99e-10 | 118 |
epithelium of mucosa | 1.76e-09 | 9 |
gastrointestinal system epithelium | 1.76e-09 | 9 |
intestinal epithelium | 1.76e-09 | 9 |
digestive system | 9.27e-09 | 116 |
digestive tract | 9.27e-09 | 116 |
primitive gut | 9.27e-09 | 116 |
subdivision of digestive tract | 1.43e-07 | 114 |
simple columnar epithelium | 2.05e-07 | 11 |