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FFCP PHASE1:Mm9::chr1:138845748..138845766,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=26424
|EntrezGene=26424
|HGNC=
|HGNC=
|MCL_coexpression_id=2288
|MCL_coexpression_id=2288
|TSSclassifier=NA
|UniProt=Q1WLP7
|UniProt=Q1WLP7
|association_with_transcript=372bp_to_uc007cva.2_5end
|association_with_transcript=372bp_to_uc007cva.2_5end
|cluster_id=chr1:138845748..138845766,-
|description=CAGE_peak_4_at_Nr5a2_5end
|description=CAGE_peak_4_at_Nr5a2_5end
|id=chr1:138845748..138845766,-
|id=chr1:138845748..138845766,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,4.75e-07,5
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!2.91e-17!43;UBERON:0005409!7.23e-14!59;UBERON:0001007!9.13e-14!128;UBERON:0001555!9.13e-14!128;UBERON:0007026!9.13e-14!128;UBERON:0004119!1.44e-13!130;UBERON:0000925!1.44e-13!130;UBERON:0006595!1.44e-13!130;UBERON:0002107!2.10e-13!22;UBERON:0007499!2.10e-13!22;UBERON:0006925!2.10e-13!22;UBERON:0009497!2.10e-13!22;UBERON:0000015!2.10e-13!22;UBERON:0002423!2.10e-13!22;UBERON:0006235!2.10e-13!22;UBERON:0008835!2.10e-13!22;UBERON:0003894!2.10e-13!22;UBERON:0004161!2.10e-13!22;UBERON:0008836!2.10e-13!22;UBERON:0004921!4.77e-13!126;UBERON:0004185!4.77e-13!126;UBERON:0000466!1.03e-12!79;UBERON:0005177!1.57e-12!85;UBERON:0009854!3.37e-12!23;UBERON:0009856!3.37e-12!23;UBERON:0002365!2.92e-11!25;UBERON:0002330!2.92e-11!25;UBERON:0002108!5.17e-09!16;UBERON:0001264!6.50e-08!12;UBERON:0003922!6.50e-08!12;UBERON:0002114!6.50e-08!12;UBERON:0003923!6.50e-08!12;UBERON:0003924!6.50e-08!12;UBERON:0003921!6.50e-08!12;UBERON:0002100!3.38e-07!98;UBERON:0000949!4.23e-07!72;UBERON:0005172!7.49e-07!49;UBERON:0005173!7.49e-07!49;UBERON:0002417!7.49e-07!49;UBERON:0000916!7.49e-07!49;UBERON:0001045!9.27e-07!13
|ontology_enrichment_uberon=UBERON:0000160!2.91e-17!43;UBERON:0005409!7.23e-14!59;UBERON:0001007!9.13e-14!128;UBERON:0001555!9.13e-14!128;UBERON:0007026!9.13e-14!128;UBERON:0004119!1.44e-13!130;UBERON:0000925!1.44e-13!130;UBERON:0006595!1.44e-13!130;UBERON:0002107!2.10e-13!22;UBERON:0007499!2.10e-13!22;UBERON:0006925!2.10e-13!22;UBERON:0009497!2.10e-13!22;UBERON:0000015!2.10e-13!22;UBERON:0002423!2.10e-13!22;UBERON:0006235!2.10e-13!22;UBERON:0008835!2.10e-13!22;UBERON:0003894!2.10e-13!22;UBERON:0004161!2.10e-13!22;UBERON:0008836!2.10e-13!22;UBERON:0004921!4.77e-13!126;UBERON:0004185!4.77e-13!126;UBERON:0000466!1.03e-12!79;UBERON:0005177!1.57e-12!85;UBERON:0009854!3.37e-12!23;UBERON:0009856!3.37e-12!23;UBERON:0002365!2.92e-11!25;UBERON:0002330!2.92e-11!25;UBERON:0002108!5.17e-09!16;UBERON:0001264!6.50e-08!12;UBERON:0003922!6.50e-08!12;UBERON:0002114!6.50e-08!12;UBERON:0003923!6.50e-08!12;UBERON:0003924!6.50e-08!12;UBERON:0003921!6.50e-08!12;UBERON:0002100!3.38e-07!98;UBERON:0000949!4.23e-07!72;UBERON:0005172!7.49e-07!49;UBERON:0005173!7.49e-07!49;UBERON:0002417!7.49e-07!49;UBERON:0000916!7.49e-07!49;UBERON:0001045!9.27e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.10e-17,22;UBERON:0007499,1.10e-17,22;UBERON:0006925,1.10e-17,22;UBERON:0009497,1.10e-17,22;UBERON:0000015,1.10e-17,22;UBERON:0002423,1.10e-17,22;UBERON:0006235,1.10e-17,22;UBERON:0008835,1.10e-17,22;UBERON:0003894,1.10e-17,22;UBERON:0004161,1.10e-17,22;UBERON:0008836,1.10e-17,22;UBERON:0009854,1.38e-16,23;UBERON:0009856,1.38e-16,23;UBERON:0002365,1.16e-14,25;UBERON:0002330,1.16e-14,25;UBERON:0001007,6.78e-13,116;UBERON:0001555,6.78e-13,116;UBERON:0007026,6.78e-13,116;UBERON:0000160,1.10e-12,31;UBERON:0004119,2.16e-12,118;UBERON:0000925,2.16e-12,118;UBERON:0006595,2.16e-12,118;UBERON:0004921,5.45e-12,114;UBERON:0001264,1.22e-11,12;UBERON:0005177,2.46e-10,79;UBERON:0005409,7.70e-09,47;UBERON:0005911,3.42e-08,69;UBERON:0003929,4.55e-08,55;UBERON:0002100,1.17e-07,90;UBERON:0000949,1.33e-07,72;UBERON:0002075,5.69e-07,19
|phase1_expression=0,1.74487703819681,1.36499771816861,0.60492842261366,1.50268718983904,1.17515490338323,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.11994695955385,2.06468352960453,0,0.86152399231815,1.50829862880122,1.90023419456374,0.756090389279792,1.77384408524244,0,0,0,2.88851619751275,1.82858109894342,4.49172583777212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,0,0,0.210324961351382,0.856952953211411,0.662605622854841,0.244981598429908,0.191690942036473,0,0,0,0.153606533256243,0.791317726381163,0.640413505216868,1.04182674111352,0,0.56276261003168,0.15279824777681,0.883885756421003,0.284743361598206,1.1183966749518,0.075726193333184,0.0755715601067855,7.53647670624362,4.30211938490693,9.51959867190851,15.6513925574967,11.0461990966104,8.51251085484938,2.52799956237153,0,0,0,0,0,0,0,0,0,0,3.65388415100992,3.10725460376606,0.445326417194474,0.346970653532272,0.304465478312141,0.461230994512117,0.904335843315735,0.352766121407114,0.628332956648377,0,0.144599356919912,0,0.323533699894818,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0.125654352112864,0,0,0,0,0.712875546952214,0.124406970610093,0,0,0.260240885925407,0.459804208866946,0,0.452114453507145,0.204109497453984,0.12811372028485,0.0937017245597288,0.258703370739016,0.215567992932842,0.567318240503458,0.527853372491847,0.657587197282725,0.278047249225598,0,0.205782136407943,1.59227413454795,0,0,0,0,0.234526059981096,0,0.473489471170421,0.983821158737019,0.154267112887378,0.930135779001631,0,0.350296027101508,0,0.656669856316381,1.05389452409612,1.02339991197733,1.3173006917463,0.536825675041487,0,0.205809224758569,0.330418782983798,1.85115396664481,0.853153002140936,2.09013004674395,1.67527699718721,2.62188582010345,2.00140239460383,3.04361001780095,1.42358718463353,2.63518327558417,2.01068167040216,2.78539060857611,1.9496408711912,0.898819408654221,1.94524244887225,1.99141273254367,0.379335801906163,0.913988100877831,0,0.203651327845314,0.193952487167626,0.280543279561274,0.316182685621286,0.295220295959204,0.156998727841375,0,10.3758419480502,1.00107063429656,0.982794975566015,0.899448449539415,1.01430060694251,2.17059443777175,3.56476192493988,3.74004978686054,6.97181475132652,3.56929837144506,8.62609239164127,4.83783231969054,7.17686648163489,12.1237861414614,5.56131981917928,13.9908621195376,0,0.189491411770485,2.44447464663039,2.20668611507745,3.28566347603903,2.34508760418542,3.33261097240419,0.390267295715598,0.945810864637146,0,0.478364305972461,0.491589944147214,0.345369963731791,0.433947175744535,0,0,0.983528546038072,0,0.160550589987792,0,0,0.504941854408746,0,0,0.215423397732799,0,0,0,0,0,0,0,20.1554920995741,1.78065603667255,2.28041743095006,0.989820737835213,1.32745138339963,3.15614827001476,3.93020624054176,4.71512699389745,4.13422650033082,4.91896236710284,8.01127708821486,4.72593848320757,5.34746067577082,5.68866164284469,1.05418608574999,4.12542172992747,0.340439605753788,0.540183282093931,0.905510786479282,0.857348140126369,0.886701168211368,0.356737635204141,0.658196082408484,0.608929898229199,0.938686832254841,0,0,0.49465875882444,0.322928853391811,0.301564624640779,0.119372344003136,0,2.04036585640896,0.741701208042039,0,1.44470807574256,0.555583582109135,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,2.03319467126849,1.29606408986162,0.627264888043406,1.52853794622324,0.269728692769641,0.661227645802687,0,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.387479470433193,0.168956125490778,0.117357238645754,0.5208175393758,0.629156066554265,0,0,0,0.405450430580328,0.205421914329655,0,0.179026695667481,0,0,0,0,0,0.100826185136841,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0,0,0.579568782096571,0.93841237725591,0.36630324853453,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,1.02440163452481,0.972426868273176,0.419226325255965,1.65459157605013,1.77797382241292,0,1.60459604795908,1.26348605881899,1.52087579934144,0.565879024158229,1.03005658216871,0.768301828858431,0.861532034334199,0.476293691283074,0.463537303779422,0.77163688185482,0.412085900803307,0.883193520806384,1.02860775715625,1.4198064492747,0.953744759789284,1.74415699958794,1.41164070622996,0.930760686808441,0.914639864363863,0.789209134313529,1.08643291076689,1.68342681497322,1.18635018124174,0.689531376628944,0,1.08455788830176,0.771626443924566,0.749431733813838,0.467863216890817,1.07435527024149,0,1.76473135295612,0.695603506861264
|phase1_expression=0,1.74487703819681,1.36499771816861,0.60492842261366,1.50268718983904,1.17515490338323,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.11994695955385,2.06468352960453,0,0.86152399231815,1.50829862880122,1.90023419456374,0.756090389279792,1.77384408524244,0,0,0,2.88851619751275,1.82858109894342,4.49172583777212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,0,0,0.210324961351382,0.856952953211411,0.662605622854841,0.244981598429908,0.191690942036473,0,0,0,0.153606533256243,0.791317726381163,0.640413505216868,1.04182674111352,0,0.56276261003168,0.15279824777681,0.883885756421003,0.284743361598206,1.1183966749518,0.075726193333184,0.0755715601067855,7.53647670624362,4.30211938490693,9.51959867190851,15.6513925574967,11.0461990966104,8.51251085484938,2.52799956237153,0,0,0,0,0,0,0,0,0,0,3.65388415100992,3.10725460376606,0.445326417194474,0.346970653532272,0.304465478312141,0.461230994512117,0.904335843315735,0.352766121407114,0.628332956648377,0,0.144599356919912,0,0.323533699894818,0,0,0,0,0,2.29911349687732,0,0,0,0,0,0.125654352112864,0,0,0,0,0.712875546952214,0.124406970610093,0,0,0.260240885925407,0.459804208866946,0,0.452114453507145,0.204109497453984,0.12811372028485,0.0937017245597288,0.258703370739016,0.215567992932842,0.567318240503458,0.527853372491847,0.657587197282725,0.278047249225598,0,0.205782136407943,1.59227413454795,0,0,0,0,0.234526059981096,0,0.473489471170421,0.983821158737019,0.154267112887378,0.930135779001631,0,0.350296027101508,0,0.656669856316381,1.05389452409612,1.02339991197733,1.3173006917463,0.536825675041487,0,0.205809224758569,0.330418782983798,1.85115396664481,0.853153002140936,2.09013004674395,1.67527699718721,2.62188582010345,2.00140239460383,3.04361001780095,1.42358718463353,2.63518327558417,2.01068167040216,2.78539060857611,1.9496408711912,0.898819408654221,1.94524244887225,1.99141273254367,0.379335801906163,0.913988100877831,0,0.203651327845314,0.193952487167626,0.280543279561274,0.316182685621286,0.295220295959204,0.156998727841375,0,10.3758419480502,1.00107063429656,0.982794975566015,0.899448449539415,1.01430060694251,2.17059443777175,3.56476192493988,3.74004978686054,6.97181475132652,3.56929837144506,8.62609239164127,4.83783231969054,7.17686648163489,12.1237861414614,5.56131981917928,13.9908621195376,0,0.189491411770485,2.44447464663039,2.20668611507745,3.28566347603903,2.34508760418542,3.33261097240419,0.390267295715598,0.945810864637146,0,0.478364305972461,0.491589944147214,0.345369963731791,0.433947175744535,0,0,0.983528546038072,0,0.160550589987792,0,0,0.504941854408746,0,0,0.215423397732799,0,0,0,0,0,0,0,20.1554920995741,1.78065603667255,2.28041743095006,0.989820737835213,1.32745138339963,3.15614827001476,3.93020624054176,4.71512699389745,4.13422650033082,4.91896236710284,8.01127708821486,4.72593848320757,5.34746067577082,5.68866164284469,1.05418608574999,4.12542172992747,0.340439605753788,0.540183282093931,0.905510786479282,0.857348140126369,0.886701168211368,0.356737635204141,0.658196082408484,0.608929898229199,0.938686832254841,0,0,0.49465875882444,0.322928853391811,0.301564624640779,0.119372344003136,0,2.04036585640896,0.741701208042039,0,1.44470807574256,0.555583582109135,0.188368457004691,0.136694227721025,0,0,0,0,0,0.158167996790568,2.03319467126849,1.29606408986162,0.627264888043406,1.52853794622324,0.269728692769641,0.661227645802687,0,0.129614973291793,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.387479470433193,0.168956125490778,0.117357238645754,0.5208175393758,0.629156066554265,0,0,0,0.405450430580328,0.205421914329655,0,0.179026695667481,0,0,0,0,0,0.100826185136841,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0,0,0.579568782096571,0.93841237725591,0.36630324853453,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,1.02440163452481,0.972426868273176,0.419226325255965,1.65459157605013,1.77797382241292,0,1.60459604795908,1.26348605881899,1.52087579934144,0.565879024158229,1.03005658216871,0.768301828858431,0.861532034334199,0.476293691283074,0.463537303779422,0.77163688185482,0.412085900803307,0.883193520806384,1.02860775715625,1.4198064492747,0.953744759789284,1.74415699958794,1.41164070622996,0.930760686808441,0.914639864363863,0.789209134313529,1.08643291076689,1.68342681497322,1.18635018124174,0.689531376628944,0,1.08455788830176,0.771626443924566,0.749431733813838,0.467863216890817,1.07435527024149,0,1.76473135295612,0.695603506861264
|short_description=p4@Nr5a2
|short_description=p4@Nr5a2
}}
}}

Latest revision as of 11:29, 26 September 2015

Short description:p4@Nr5a2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Nr5a2_5end
Coexpression cluster:MCL_coexpression_mm9:2288
Association with transcript: 372bp_to_uc007cva.2_5end
EntrezGene:Nr5a2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Nr5a2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.49
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.54
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C49.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C815.65
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.05
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.51
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.65
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G11.05
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E92.64
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B210.38
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A33.56
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F46.97
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B97.18
liver, neonate N20.CNhs11220.823-25A312.12
liver, neonate N25.CNhs11198.1368-26H15.56
liver, neonate N30.CNhs11106.1382-42D113.99
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F82.44
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I720.16
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E54.72
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I74.92
pancreas, neonate N00.CNhs11105.645-26G98.01
pancreas, neonate N01.CNhs11138.1531-43D74.73
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B65.69
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte4.75e-075

Uber anatomy
Ontology termp-valuen
liver1.10e-1722
epithelial sac1.10e-1722
digestive gland1.10e-1722
epithelium of foregut-midgut junction1.10e-1722
anatomical boundary1.10e-1722
hepatobiliary system1.10e-1722
foregut-midgut junction1.10e-1722
hepatic diverticulum1.10e-1722
liver primordium1.10e-1722
septum transversum1.10e-1722
liver bud1.10e-1722
digestive tract diverticulum1.38e-1623
sac1.38e-1623
exocrine gland1.16e-1425
exocrine system1.16e-1425
digestive system6.78e-13116
digestive tract6.78e-13116
primitive gut6.78e-13116
intestine1.10e-1231
endoderm-derived structure2.16e-12118
endoderm2.16e-12118
presumptive endoderm2.16e-12118
subdivision of digestive tract5.45e-12114
pancreas1.22e-1112
trunk region element2.46e-1079
gastrointestinal system7.70e-0947
endo-epithelium3.42e-0869
gut epithelium4.55e-0855
trunk1.17e-0790
endocrine system1.33e-0772
viscus5.69e-0719
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